RNA–Protein interactions for RNA: ENST00000598969.5

COPE-208, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 5

Gene COPE, Length 1,770 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-208ENST00000598969 USP35Q9P2H5 1018 aa27.47■■□□□ 1.99
COPE-208ENST00000598969 PLEKHG2Q9H7P9 1386 aa27.46■■□□□ 1.99
COPE-208ENST00000598969 AMOTQ4VCS5 1084 aa27.45■■□□□ 1.98
COPE-208ENST00000598969 PLEKHO1Q53GL0 409 aaPredicted RBP27.45■■□□□ 1.98
COPE-208ENST00000598969 SPATA31A1Q5TZJ5 1347 aa27.44■■□□□ 1.98
COPE-208ENST00000598969 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.44■■□□□ 1.98
COPE-208ENST00000598969 OVOS2A0A0G2JMS6 1433 aa27.44■■□□□ 1.98
COPE-208ENST00000598969 SPATA31A5Q5VU36 1347 aa27.43■■□□□ 1.98
COPE-208ENST00000598969 SPATA31A7Q8IWB4 1347 aa27.43■■□□□ 1.98
COPE-208ENST00000598969 USP21Q9UK80 565 aa27.43■■□□□ 1.98
COPE-208ENST00000598969 AFF2P51816 1311 aa27.43■■□□□ 1.98
COPE-208ENST00000598969 IL2RBP14784 551 aa27.43■■□□□ 1.98
COPE-208ENST00000598969 GTF3C3Q9Y5Q9 886 aa27.43■■□□□ 1.98
COPE-208ENST00000598969 PARP4Q9UKK3 1724 aaKnown RBP27.42■■□□□ 1.98
COPE-208ENST00000598969 VPS72Q15906 364 aa27.42■■□□□ 1.98
COPE-208ENST00000598969 DISP2A7MBM2 1401 aa27.42■■□□□ 1.98
COPE-208ENST00000598969 PKD1L3Q7Z443 1732 aa27.41■■□□□ 1.98
COPE-208ENST00000598969 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.41■■□□□ 1.98
COPE-208ENST00000598969 CDCA7LQ96GN5 454 aa27.4■■□□□ 1.98
COPE-208ENST00000598969 ZNF530Q6P9A1 599 aaPredicted RBP27.4■■□□□ 1.98
COPE-208ENST00000598969 LMOD3Q0VAK6 560 aa27.39■■□□□ 1.98
COPE-208ENST00000598969 PDE3BQ13370 1112 aa27.39■■□□□ 1.98
COPE-208ENST00000598969 WDR63Q8IWG1 891 aa27.39■■□□□ 1.98
COPE-208ENST00000598969 MAP3K5Q99683 1374 aa27.38■■□□□ 1.97
COPE-208ENST00000598969 GOLGA2Q08379 1002 aa27.38■■□□□ 1.97
COPE-208ENST00000598969 THRAP3Q9Y2W1 955 aaKnown RBP27.38■■□□□ 1.97
COPE-208ENST00000598969 WNK3Q9BYP7 1800 aa27.38■■□□□ 1.97
COPE-208ENST00000598969 DCTN1Q14203 1278 aa27.37■■□□□ 1.97
COPE-208ENST00000598969 SPINK5Q9NQ38 1064 aaPredicted RBP27.37■■□□□ 1.97
COPE-208ENST00000598969 SPG7Q9UQ90 795 aa27.37■■□□□ 1.97
COPE-208ENST00000598969 CCDC9Q9Y3X0 531 aaKnown RBP27.37■■□□□ 1.97
COPE-208ENST00000598969 GNAT3A8MTJ3 354 aa27.37■■□□□ 1.97
COPE-208ENST00000598969 THUMPD2Q9BTF0 503 aaKnown RBP27.37■■□□□ 1.97
COPE-208ENST00000598969 AKAP4Q5JQC9 854 aa27.36■■□□□ 1.97
COPE-208ENST00000598969 HTATSF1O43719 755 aaKnown RBP27.35■■□□□ 1.97
COPE-208ENST00000598969 MCM10Q7L590 875 aa27.35■■□□□ 1.97
COPE-208ENST00000598969 ZCRB1Q8TBF4 217 aaKnown RBP27.35■■□□□ 1.97
COPE-208ENST00000598969 ATRNO75882 1429 aa27.33■■□□□ 1.97
COPE-208ENST00000598969 CYP27B1O15528 508 aa27.33■■□□□ 1.97
COPE-208ENST00000598969 SLFN5Q08AF3 891 aa27.33■■□□□ 1.97
COPE-208ENST00000598969 BARGINQ6ZT62 677 aa27.33■■□□□ 1.97
COPE-208ENST00000598969 SHANK3Q9BYB0 1731 aa27.33■■□□□ 1.97
COPE-208ENST00000598969 C1orf141Q5JVX7 400 aa27.32■■□□□ 1.96
COPE-208ENST00000598969 RTF1Q92541 710 aaKnown RBP27.32■■□□□ 1.96
COPE-208ENST00000598969 PHKG2P15735 406 aa27.32■■□□□ 1.96
COPE-208ENST00000598969 IL17REQ8NFR9 667 aa27.32■■□□□ 1.96
COPE-208ENST00000598969 TRMT2AQ8IZ69 625 aaKnown RBP27.31■■□□□ 1.96
COPE-208ENST00000598969 IL16Q14005 1332 aa27.31■■□□□ 1.96
COPE-208ENST00000598969 CDCA7Q9BWT1 371 aaPredicted RBP27.3■■□□□ 1.96
COPE-208ENST00000598969 E9PSI1 815 aa27.3■■□□□ 1.96
COPE-208ENST00000598969 IFNL2Q8IZJ0 200 aa27.3■■□□□ 1.96
COPE-208ENST00000598969 GLI3P10071 1580 aa27.29■■□□□ 1.96
COPE-208ENST00000598969 CEMIPQ8WUJ3 1361 aa27.29■■□□□ 1.96
COPE-208ENST00000598969 PCDH11XQ9BZA7 1347 aa27.29■■□□□ 1.96
COPE-208ENST00000598969 PCDH11YQ9BZA8 1340 aa27.29■■□□□ 1.96
COPE-208ENST00000598969 TRPC5Q9UL62 973 aaPredicted RBP27.29■■□□□ 1.96
COPE-208ENST00000598969 LRRC37A3O60309 1634 aa27.28■■□□□ 1.96
COPE-208ENST00000598969 DUSP27Q5VZP5 1158 aa27.28■■□□□ 1.96
COPE-208ENST00000598969 MPRIPQ6WCQ1 1025 aa27.28■■□□□ 1.96
COPE-208ENST00000598969 LGR6Q9HBX8 967 aa27.28■■□□□ 1.96
COPE-208ENST00000598969 CALD1Q05682 793 aaKnown RBP27.27■■□□□ 1.96
COPE-208ENST00000598969 GJD4Q96KN9 370 aaPredicted RBP27.27■■□□□ 1.96
COPE-208ENST00000598969 ADAMTS7Q9UKP4 1686 aa27.27■■□□□ 1.96
COPE-208ENST00000598969 FAM98CQ17RN3 349 aaKnown RBP27.27■■□□□ 1.96
COPE-208ENST00000598969 RNMTO43148 476 aaKnown RBP27.26■■□□□ 1.95
COPE-208ENST00000598969 KDM6AO15550 1401 aaPredicted RBP27.26■■□□□ 1.95
COPE-208ENST00000598969 TNS2Q63HR2 1409 aa27.26■■□□□ 1.95
COPE-208ENST00000598969 ZNF853P0CG23 659 aa27.25■■□□□ 1.95
COPE-208ENST00000598969 QTRT2Q9H974 415 aaKnown RBP27.25■■□□□ 1.95
COPE-208ENST00000598969 EXOC5O00471 708 aa27.25■■□□□ 1.95
COPE-208ENST00000598969 DDX54Q8TDD1 881 aaKnown RBP27.25■■□□□ 1.95
COPE-208ENST00000598969 IFT57Q9NWB7 429 aa27.24■■□□□ 1.95
COPE-208ENST00000598969 VIRMAQ69YN4 1812 aaKnown RBP27.23■■□□□ 1.95
COPE-208ENST00000598969 NKX1-1Q15270 411 aaPredicted RBP27.22■■□□□ 1.95
COPE-208ENST00000598969 CFAP44Q96MT7 982 aa27.22■■□□□ 1.95
COPE-208ENST00000598969 SCN11AQ9UI33 1791 aa27.22■■□□□ 1.95
COPE-208ENST00000598969 GNAI1P63096 354 aa27.22■■□□□ 1.95
COPE-208ENST00000598969 DDB1Q16531 1140 aa27.22■■□□□ 1.95
COPE-208ENST00000598969 MYH16Q9H6N6 1097 aa27.22■■□□□ 1.95
COPE-208ENST00000598969 LAS1LQ9Y4W2 734 aaKnown RBP27.22■■□□□ 1.95
COPE-208ENST00000598969 THSD7AQ9UPZ6 1657 aa27.21■■□□□ 1.95
COPE-208ENST00000598969 HSP90AB1P08238 724 aaKnown RBP27.21■■□□□ 1.95
COPE-208ENST00000598969 TSR2Q969E8 191 aaKnown RBP27.21■■□□□ 1.95
COPE-208ENST00000598969 DCAF5Q96JK2 942 aa27.21■■□□□ 1.95
COPE-208ENST00000598969 FANCIQ9NVI1 1328 aa27.21■■□□□ 1.95
COPE-208ENST00000598969 ZNF772Q68DY9 489 aaPredicted RBP27.2■■□□□ 1.95
COPE-208ENST00000598969 NEFLP07196 543 aa27.2■■□□□ 1.94
COPE-208ENST00000598969 CHL1O00533 1208 aa27.19■■□□□ 1.94
COPE-208ENST00000598969 ONECUT3O60422 494 aaPredicted RBP27.18■■□□□ 1.94
COPE-208ENST00000598969 MBIPQ9NS73 344 aa27.18■■□□□ 1.94
COPE-208ENST00000598969 SUPT16HQ9Y5B9 1047 aaKnown RBP27.17■■□□□ 1.94
COPE-208ENST00000598969 TAF7Q15545 349 aaPredicted RBP27.17■■□□□ 1.94
COPE-208ENST00000598969 TEFQ10587 303 aa27.16■■□□□ 1.94
COPE-208ENST00000598969 MIS18AQ9NYP9 233 aa27.16■■□□□ 1.94
COPE-208ENST00000598969 MRC1P22897 1456 aa27.16■■□□□ 1.94
COPE-208ENST00000598969 SIPA1L3O60292 1781 aaPredicted RBP27.16■■□□□ 1.94
COPE-208ENST00000598969 ILDR1Q86SU0 546 aaPredicted RBP27.14■■□□□ 1.94
COPE-208ENST00000598969 MARCH10Q8NA82 808 aaPredicted RBP27.14■■□□□ 1.94
COPE-208ENST00000598969 SLC52A2Q9HAB3 445 aa27.14■■□□□ 1.93
COPE-208ENST00000598969 RGS17Q9UGC6 210 aaPredicted RBP27.14■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms