RNA–Protein interactions for RNA: ENST00000598923.1

SNRPA-205, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-205ENST00000598923 NBPF6Q5VWK0 638 aa25.5■■□□□ 1.67
SNRPA-205ENST00000598923 NBPF4Q96M43 638 aa25.5■■□□□ 1.67
SNRPA-205ENST00000598923 PPP1R1BQ9UD71 204 aaPredicted RBP25.5■■□□□ 1.67
SNRPA-205ENST00000598923 PPM1GO15355 546 aaPredicted RBP25.49■■□□□ 1.67
SNRPA-205ENST00000598923 TNNT2P45379 298 aaPredicted RBP25.49■■□□□ 1.67
SNRPA-205ENST00000598923 INSRP06213 1382 aa25.48■■□□□ 1.67
SNRPA-205ENST00000598923 KIF24Q5T7B8 1368 aa25.48■■□□□ 1.67
SNRPA-205ENST00000598923 KNSTRNQ9Y448 316 aa25.48■■□□□ 1.67
SNRPA-205ENST00000598923 ANKRD26Q9UPS8 1709 aa25.48■■□□□ 1.67
SNRPA-205ENST00000598923 LY75O60449 1722 aa25.47■■□□□ 1.67
SNRPA-205ENST00000598923 ZCRB1Q8TBF4 217 aaKnown RBP25.47■■□□□ 1.67
SNRPA-205ENST00000598923 SMG6Q86US8 1419 aaKnown RBP25.46■■□□□ 1.67
SNRPA-205ENST00000598923 QSER1Q2KHR3 1735 aa25.46■■□□□ 1.67
SNRPA-205ENST00000598923 FLT4P35916 1363 aa25.46■■□□□ 1.67
SNRPA-205ENST00000598923 ZBTB7AO95365 584 aa25.46■■□□□ 1.67
SNRPA-205ENST00000598923 HSP90AB2PQ58FF8 381 aa25.46■■□□□ 1.67
SNRPA-205ENST00000598923 LRRC4BQ9NT99 713 aa25.46■■□□□ 1.67
SNRPA-205ENST00000598923 EMILIN1Q9Y6C2 1016 aa25.46■■□□□ 1.67
SNRPA-205ENST00000598923 MAP2P11137 1827 aaKnown RBP25.45■■□□□ 1.66
SNRPA-205ENST00000598923 PTGER2P43116 358 aa25.45■■□□□ 1.66
SNRPA-205ENST00000598923 USHBP1Q8N6Y0 703 aa25.44■■□□□ 1.66
SNRPA-205ENST00000598923 NSD2O96028 1365 aa25.44■■□□□ 1.66
SNRPA-205ENST00000598923 PRIM1P49642 420 aaKnown RBP25.42■■□□□ 1.66
SNRPA-205ENST00000598923 ATF5Q9Y2D1 282 aaPredicted RBP25.42■■□□□ 1.66
SNRPA-205ENST00000598923 WASHC2AQ641Q2 1341 aa25.41■■□□□ 1.66
SNRPA-205ENST00000598923 ZNF827Q17R98 1081 aa25.41■■□□□ 1.66
SNRPA-205ENST00000598923 MORC1Q86VD1 984 aa25.41■■□□□ 1.66
SNRPA-205ENST00000598923 TUBGCP6Q96RT7 1819 aa25.4■■□□□ 1.66
SNRPA-205ENST00000598923 SLC27A3Q5K4L6 730 aa25.4■■□□□ 1.66
SNRPA-205ENST00000598923 RAPGEF4Q8WZA2 1011 aa25.4■■□□□ 1.66
SNRPA-205ENST00000598923 SGIP1Q9BQI5 828 aa25.4■■□□□ 1.66
SNRPA-205ENST00000598923 MTFR1LQ9H019 292 aa25.4■■□□□ 1.66
SNRPA-205ENST00000598923 POLKQ9UBT6 870 aa25.39■■□□□ 1.66
SNRPA-205ENST00000598923 PKD1L3Q7Z443 1732 aa25.38■■□□□ 1.65
SNRPA-205ENST00000598923 AKT1S1Q96B36 256 aa25.38■■□□□ 1.65
SNRPA-205ENST00000598923 SYTL4Q96C24 671 aaPredicted RBP25.38■■□□□ 1.65
SNRPA-205ENST00000598923 NCAPD2Q15021 1401 aa25.37■■□□□ 1.65
SNRPA-205ENST00000598923 COL24A1Q17RW2 1714 aa25.37■■□□□ 1.65
SNRPA-205ENST00000598923 TATP17735 454 aaPredicted RBP25.37■■□□□ 1.65
SNRPA-205ENST00000598923 CNGB1Q14028 1251 aaPredicted RBP25.37■■□□□ 1.65
SNRPA-205ENST00000598923 ITGB4P16144 1822 aa25.34■■□□□ 1.65
SNRPA-205ENST00000598923 AMER1Q5JTC6 1135 aaPredicted RBP25.33■■□□□ 1.65
SNRPA-205ENST00000598923 TOGARAM1Q9Y4F4 1720 aa25.33■■□□□ 1.65
SNRPA-205ENST00000598923 PCDH11XQ9BZA7 1347 aa25.33■■□□□ 1.64
SNRPA-205ENST00000598923 PCDH11YQ9BZA8 1340 aa25.33■■□□□ 1.64
SNRPA-205ENST00000598923 PER1O15534 1290 aaPredicted RBP25.32■■□□□ 1.64
SNRPA-205ENST00000598923 KCNQ4P56696 695 aa25.32■■□□□ 1.64
SNRPA-205ENST00000598923 CC2D1BQ5T0F9 858 aaKnown RBP25.32■■□□□ 1.64
SNRPA-205ENST00000598923 CYP27B1O15528 508 aa25.3■■□□□ 1.64
SNRPA-205ENST00000598923 FHDC1Q9C0D6 1143 aaPredicted RBP25.3■■□□□ 1.64
SNRPA-205ENST00000598923 PNPLA7Q6ZV29 1317 aa25.3■■□□□ 1.64
SNRPA-205ENST00000598923 TAF1LQ8IZX4 1826 aa25.3■■□□□ 1.64
SNRPA-205ENST00000598923 DCAF8L1A6NGE4 600 aa25.29■■□□□ 1.64
SNRPA-205ENST00000598923 SLC16A10Q8TF71 515 aa25.29■■□□□ 1.64
SNRPA-205ENST00000598923 SYT17Q9BSW7 474 aa25.29■■□□□ 1.64
SNRPA-205ENST00000598923 C5P01031 1676 aa25.28■■□□□ 1.64
SNRPA-205ENST00000598923 ARXQ96QS3 562 aa25.27■■□□□ 1.64
SNRPA-205ENST00000598923 CCNL1Q9UK58 526 aaPredicted RBP25.27■■□□□ 1.64
SNRPA-205ENST00000598923 EYA1Q99502 592 aa25.26■■□□□ 1.63
SNRPA-205ENST00000598923 TFCP2L1Q9NZI6 479 aa25.26■■□□□ 1.63
SNRPA-205ENST00000598923 YY1P25490 414 aa25.25■■□□□ 1.63
SNRPA-205ENST00000598923 EIF4A2Q14240 407 aaKnown RBP25.25■■□□□ 1.63
SNRPA-205ENST00000598923 MAP3K5Q99683 1374 aa25.25■■□□□ 1.63
SNRPA-205ENST00000598923 NKX1-1Q15270 411 aaPredicted RBP25.23■■□□□ 1.63
SNRPA-205ENST00000598923 MPRIPQ6WCQ1 1025 aa25.21■■□□□ 1.63
SNRPA-205ENST00000598923 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.21■■□□□ 1.63
SNRPA-205ENST00000598923 SPG7Q9UQ90 795 aa25.21■■□□□ 1.63
SNRPA-205ENST00000598923 PALLDQ8WX93 1383 aa25.2■■□□□ 1.63
SNRPA-205ENST00000598923 CHD4Q14839 1912 aa25.18■■□□□ 1.62
SNRPA-205ENST00000598923 MTHFSP49914 203 aa25.18■■□□□ 1.62
SNRPA-205ENST00000598923 PLEKHG2Q9H7P9 1386 aa25.18■■□□□ 1.62
SNRPA-205ENST00000598923 C4BP0C0L5 1744 aa25.17■■□□□ 1.62
SNRPA-205ENST00000598923 POLD1P28340 1107 aa25.16■■□□□ 1.62
SNRPA-205ENST00000598923 COL23A1Q86Y22 540 aaPredicted RBP25.16■■□□□ 1.62
SNRPA-205ENST00000598923 PIGBQ92521 554 aa25.16■■□□□ 1.62
SNRPA-205ENST00000598923 UTRNP46939 3433 aa25.16■■□□□ 1.62
SNRPA-205ENST00000598923 HMGB2P26583 209 aaKnown RBP25.15■■□□□ 1.62
SNRPA-205ENST00000598923 SMARCC1Q92922 1105 aaPredicted RBP25.15■■□□□ 1.62
SNRPA-205ENST00000598923 UBR3Q6ZT12 1888 aa25.15■■□□□ 1.62
SNRPA-205ENST00000598923 IGSF1Q8N6C5 1336 aa25.14■■□□□ 1.62
SNRPA-205ENST00000598923 PHKG2P15735 406 aa25.13■■□□□ 1.61
SNRPA-205ENST00000598923 IFNL2Q8IZJ0 200 aa25.13■■□□□ 1.61
SNRPA-205ENST00000598923 NPC1L1Q9UHC9 1359 aa25.13■■□□□ 1.61
SNRPA-205ENST00000598923 IL13P35225 146 aa25.11■■□□□ 1.61
SNRPA-205ENST00000598923 ZEB1P37275 1124 aaPredicted RBP25.11■■□□□ 1.61
SNRPA-205ENST00000598923 SULT6B1Q6IMI4 303 aa25.09■■□□□ 1.61
SNRPA-205ENST00000598923 AEBP1Q8IUX7 1158 aa25.09■■□□□ 1.61
SNRPA-205ENST00000598923 MSH5O43196 834 aa25.08■■□□□ 1.61
SNRPA-205ENST00000598923 FLAD1Q8NFF5 587 aa25.08■■□□□ 1.61
SNRPA-205ENST00000598923 TMOD3Q9NYL9 352 aa25.08■■□□□ 1.61
SNRPA-205ENST00000598923 LOC102724428A0A0B4J2F2 783 aa25.06■■□□□ 1.6
SNRPA-205ENST00000598923 DIAPH1O60610 1272 aaKnown RBP25.06■■□□□ 1.6
SNRPA-205ENST00000598923 SIK1P57059 783 aa25.06■■□□□ 1.6
SNRPA-205ENST00000598923 AMIGO3Q86WK7 504 aa25.06■■□□□ 1.6
SNRPA-205ENST00000598923 KLHL34Q8N239 644 aa25.06■■□□□ 1.6
SNRPA-205ENST00000598923 ASAP1Q9ULH1 1129 aa25.06■■□□□ 1.6
SNRPA-205ENST00000598923 ZNF831Q5JPB2 1677 aa25.05■■□□□ 1.6
SNRPA-205ENST00000598923 DDX10Q13206 875 aaKnown RBP25.04■■□□□ 1.6
SNRPA-205ENST00000598923 PLEKHO1Q53GL0 409 aaPredicted RBP25.04■■□□□ 1.6
SNRPA-205ENST00000598923 MSL1Q68DK7 614 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms