RNA–Protein interactions for RNA: ENST00000598913.5

SAMD4B-208, Transcript of sterile alpha motif domain containing 4B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SAMD4B, Length 2,877 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4B-208ENST00000598913 CHL1O00533 1208 aa28.17■■■□□ 2.1
SAMD4B-208ENST00000598913 EXOC6BQ9Y2D4 811 aa28.17■■■□□ 2.1
SAMD4B-208ENST00000598913 K7ELQ4 463 aaPredicted RBP28.17■■■□□ 2.1
SAMD4B-208ENST00000598913 SDSP20132 328 aa28.17■■■□□ 2.1
SAMD4B-208ENST00000598913 TSPYL4Q9UJ04 414 aa28.16■■■□□ 2.1
SAMD4B-208ENST00000598913 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.16■■■□□ 2.1
SAMD4B-208ENST00000598913 AATKQ6ZMQ8 1374 aa28.15■■■□□ 2.1
SAMD4B-208ENST00000598913 L1TD1Q5T7N2 865 aaKnown RBP28.15■■■□□ 2.1
SAMD4B-208ENST00000598913 SNX21Q969T3 373 aa28.15■■■□□ 2.1
SAMD4B-208ENST00000598913 TTC22Q5TAA0 569 aa28.15■■■□□ 2.1
SAMD4B-208ENST00000598913 SETD1AO15047 1707 aaKnown RBP28.14■■■□□ 2.1
SAMD4B-208ENST00000598913 FSD2A1L4K1 749 aa28.14■■■□□ 2.1
SAMD4B-208ENST00000598913 NOL8Q76FK4 1167 aaKnown RBP28.14■■■□□ 2.1
SAMD4B-208ENST00000598913 USHBP1Q8N6Y0 703 aa28.13■■■□□ 2.09
SAMD4B-208ENST00000598913 DLC1Q96QB1 1528 aa28.13■■■□□ 2.09
SAMD4B-208ENST00000598913 INTS3Q68E01 1043 aaKnown RBP28.13■■■□□ 2.09
SAMD4B-208ENST00000598913 ANKRD44Q8N8A2 993 aa28.13■■■□□ 2.09
SAMD4B-208ENST00000598913 RGS12O14924 1447 aa28.12■■■□□ 2.09
SAMD4B-208ENST00000598913 ZBTB7CA1YPR0 619 aa28.12■■■□□ 2.09
SAMD4B-208ENST00000598913 NGDNQ8NEJ9 315 aaKnown RBP28.12■■■□□ 2.09
SAMD4B-208ENST00000598913 C14orf37Q86TY3 774 aa28.12■■■□□ 2.09
SAMD4B-208ENST00000598913 FAM43AQ8N2R8 423 aa28.11■■■□□ 2.09
SAMD4B-208ENST00000598913 RAB3GAP1Q15042 981 aa28.1■■■□□ 2.09
SAMD4B-208ENST00000598913 SPATA31D1Q6ZQQ2 1576 aa28.1■■■□□ 2.09
SAMD4B-208ENST00000598913 ATP10DQ9P241 1426 aa28.1■■■□□ 2.09
SAMD4B-208ENST00000598913 AMPHP49418 695 aa28.1■■■□□ 2.09
SAMD4B-208ENST00000598913 ZGPATQ8N5A5 531 aaKnown RBP28.1■■■□□ 2.09
SAMD4B-208ENST00000598913 DIP2BQ9P265 1576 aa28.1■■■□□ 2.09
SAMD4B-208ENST00000598913 RTL1A6NKG5 1358 aa28.09■■■□□ 2.09
SAMD4B-208ENST00000598913 RTF1Q92541 710 aaKnown RBP28.09■■■□□ 2.09
SAMD4B-208ENST00000598913 EYA1Q99502 592 aa28.09■■■□□ 2.09
SAMD4B-208ENST00000598913 CHMP4BQ9H444 224 aaKnown RBP28.09■■■□□ 2.09
SAMD4B-208ENST00000598913 NCOA3Q9Y6Q9 1424 aa28.09■■■□□ 2.09
SAMD4B-208ENST00000598913 RIMS1Q86UR5 1692 aaKnown RBP28.08■■■□□ 2.09
SAMD4B-208ENST00000598913 TNRQ92752 1358 aa28.08■■■□□ 2.09
SAMD4B-208ENST00000598913 AMOTL2Q9Y2J4 779 aa28.08■■■□□ 2.09
SAMD4B-208ENST00000598913 DDX11L8A8MPP1 907 aa28.07■■■□□ 2.08
SAMD4B-208ENST00000598913 NCLP19338 710 aaKnown RBP28.07■■■□□ 2.08
SAMD4B-208ENST00000598913 GRPEL1Q9HAV7 217 aa28.07■■■□□ 2.08
SAMD4B-208ENST00000598913 USP26Q9BXU7 913 aa28.07■■■□□ 2.08
SAMD4B-208ENST00000598913 TMEM2Q9UHN6 1383 aa28.06■■■□□ 2.08
SAMD4B-208ENST00000598913 DTNBO60941 627 aa28.05■■■□□ 2.08
SAMD4B-208ENST00000598913 NLRP6P59044 892 aa28.04■■■□□ 2.08
SAMD4B-208ENST00000598913 PNMA6EA0A0J9YXQ4 647 aa28.03■■■□□ 2.08
SAMD4B-208ENST00000598913 FKBP5Q13451 457 aaPredicted RBP28.03■■■□□ 2.08
SAMD4B-208ENST00000598913 FOXD4L6Q3SYB3 417 aaPredicted RBP28.03■■■□□ 2.08
SAMD4B-208ENST00000598913 MCTP1Q6DN14 999 aa28.03■■■□□ 2.08
SAMD4B-208ENST00000598913 FOXD4L3Q6VB84 417 aaPredicted RBP28.03■■■□□ 2.08
SAMD4B-208ENST00000598913 GBP4Q96PP9 640 aa28.02■■■□□ 2.08
SAMD4B-208ENST00000598913 TPRNQ4KMQ1 711 aa28.02■■■□□ 2.08
SAMD4B-208ENST00000598913 ADAMTS13Q76LX8 1427 aa28.02■■■□□ 2.08
SAMD4B-208ENST00000598913 PPP6R1Q9UPN7 881 aa28.01■■■□□ 2.08
SAMD4B-208ENST00000598913 MAP4K4O95819 1239 aaPredicted RBP28.01■■■□□ 2.07
SAMD4B-208ENST00000598913 HDGFP51858 240 aaKnown RBP28.01■■■□□ 2.07
SAMD4B-208ENST00000598913 PTPRUQ92729 1446 aa28.01■■■□□ 2.07
SAMD4B-208ENST00000598913 RPAP2Q8IXW5 612 aaPredicted RBP28■■■□□ 2.07
SAMD4B-208ENST00000598913 PEAK1Q9H792 1746 aa28■■■□□ 2.07
SAMD4B-208ENST00000598913 USP6P35125 1406 aa28■■■□□ 2.07
SAMD4B-208ENST00000598913 CRB1P82279 1406 aa28■■■□□ 2.07
SAMD4B-208ENST00000598913 SIPA1L2Q9P2F8 1722 aaPredicted RBP28■■■□□ 2.07
SAMD4B-208ENST00000598913 IL1RAPL2Q9NP60 686 aa27.99■■■□□ 2.07
SAMD4B-208ENST00000598913 RILPL2Q969X0 211 aa27.99■■■□□ 2.07
SAMD4B-208ENST00000598913 BAG4O95429 457 aaKnown RBP27.98■■■□□ 2.07
SAMD4B-208ENST00000598913 DDX49Q9Y6V7 483 aaKnown RBP27.98■■■□□ 2.07
SAMD4B-208ENST00000598913 C3P01024 1663 aa27.97■■■□□ 2.07
SAMD4B-208ENST00000598913 ANXA1P04083 346 aa27.97■■■□□ 2.07
SAMD4B-208ENST00000598913 OVOS2A0A0J9YW53 1432 aa27.97■■■□□ 2.07
SAMD4B-208ENST00000598913 OVOS2Q6IE36 1432 aa27.97■■■□□ 2.07
SAMD4B-208ENST00000598913 ERBB4Q15303 1308 aa27.97■■■□□ 2.07
SAMD4B-208ENST00000598913 PLEKHG3A1L390 1219 aa27.97■■■□□ 2.07
SAMD4B-208ENST00000598913 MRE11P49959 708 aa27.96■■■□□ 2.07
SAMD4B-208ENST00000598913 MON2Q7Z3U7 1717 aa27.96■■■□□ 2.07
SAMD4B-208ENST00000598913 EIF2S2P20042 333 aaKnown RBP27.96■■■□□ 2.07
SAMD4B-208ENST00000598913 PDE1AP54750 535 aa27.96■■■□□ 2.07
SAMD4B-208ENST00000598913 AGLP35573 1532 aa27.95■■■□□ 2.07
SAMD4B-208ENST00000598913 TRIM6-TRIM34B2RNG4 842 aa27.95■■■□□ 2.07
SAMD4B-208ENST00000598913 UNC5CLQ8IV45 518 aa27.95■■■□□ 2.07
SAMD4B-208ENST00000598913 PHAXQ9H814 394 aaKnown RBP27.95■■■□□ 2.07
SAMD4B-208ENST00000598913 FLIIQ13045 1269 aa27.94■■■□□ 2.06
SAMD4B-208ENST00000598913 RBM27Q9P2N5 1060 aaKnown RBP27.94■■■□□ 2.06
SAMD4B-208ENST00000598913 PALD1Q9ULE6 856 aa27.94■■■□□ 2.06
SAMD4B-208ENST00000598913 LRRFIP2Q9Y608 721 aaKnown RBP27.94■■■□□ 2.06
SAMD4B-208ENST00000598913 CEP170BQ9Y4F5 1589 aaPredicted RBP27.94■■■□□ 2.06
SAMD4B-208ENST00000598913 IL17REQ8NFR9 667 aa27.93■■■□□ 2.06
SAMD4B-208ENST00000598913 RABEP1Q15276 862 aa27.93■■■□□ 2.06
SAMD4B-208ENST00000598913 STK31Q9BXU1 1019 aa27.93■■■□□ 2.06
SAMD4B-208ENST00000598913 CIZ1Q9ULV3 898 aaPredicted RBP27.93■■■□□ 2.06
SAMD4B-208ENST00000598913 CAVIN1Q6NZI2 390 aaKnown RBP27.92■■■□□ 2.06
SAMD4B-208ENST00000598913 LARP6Q9BRS8 491 aaKnown RBP27.92■■■□□ 2.06
SAMD4B-208ENST00000598913 ITSN1Q15811 1721 aa27.92■■■□□ 2.06
SAMD4B-208ENST00000598913 PTPRCP08575 1304 aa27.92■■■□□ 2.06
SAMD4B-208ENST00000598913 IL25Q9H293 177 aa27.92■■■□□ 2.06
SAMD4B-208ENST00000598913 NUTM1Q86Y26 1132 aa27.91■■■□□ 2.06
SAMD4B-208ENST00000598913 NEK4P51957 841 aa27.91■■■□□ 2.06
SAMD4B-208ENST00000598913 SETD1BQ9UPS6 1966 aaKnown RBP27.9■■■□□ 2.06
SAMD4B-208ENST00000598913 UPF3BQ9BZI7 483 aaKnown RBP27.9■■■□□ 2.06
SAMD4B-208ENST00000598913 TECPR2O15040 1411 aa27.9■■■□□ 2.06
SAMD4B-208ENST00000598913 GNAI2P04899 355 aa27.89■■■□□ 2.06
SAMD4B-208ENST00000598913 ABTB2Q8N961 1025 aa27.89■■■□□ 2.06
SAMD4B-208ENST00000598913 PRPF40AO75400 957 aaKnown RBP27.89■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms