RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-221ENST00000598808 AEBP1Q8IUX7 1158 aa26.94■■□□□ 1.9
IRF3-221ENST00000598808 RGPD1P0DJD0 1748 aa26.94■■□□□ 1.9
IRF3-221ENST00000598808 ANP32CO43423 234 aa26.93■■□□□ 1.9
IRF3-221ENST00000598808 HMOX1P09601 288 aa26.93■■□□□ 1.9
IRF3-221ENST00000598808 NUDCQ9Y266 331 aa26.93■■□□□ 1.9
IRF3-221ENST00000598808 NCAPD2Q15021 1401 aa26.93■■□□□ 1.9
IRF3-221ENST00000598808 ZCRB1Q8TBF4 217 aaKnown RBP26.93■■□□□ 1.9
IRF3-221ENST00000598808 MARCH10Q8NA82 808 aaPredicted RBP26.91■■□□□ 1.9
IRF3-221ENST00000598808 FAM196AQ6ZSG2 479 aa26.9■■□□□ 1.9
IRF3-221ENST00000598808 CCDC125Q86Z20 511 aa26.9■■□□□ 1.9
IRF3-221ENST00000598808 U2AF1L5P0DN76 240 aaPredicted RBP26.87■■□□□ 1.89
IRF3-221ENST00000598808 U2AF1Q01081 240 aaKnown RBP eCLIP26.87■■□□□ 1.89
IRF3-221ENST00000598808 MIER1Q8N108 512 aa26.87■■□□□ 1.89
IRF3-221ENST00000598808 SPG7Q9UQ90 795 aa26.87■■□□□ 1.89
IRF3-221ENST00000598808 PCDH11XQ9BZA7 1347 aa26.87■■□□□ 1.89
IRF3-221ENST00000598808 PCDH11YQ9BZA8 1340 aa26.87■■□□□ 1.89
IRF3-221ENST00000598808 SHANK3Q9BYB0 1731 aa26.86■■□□□ 1.89
IRF3-221ENST00000598808 SF3B2Q13435 895 aaKnown RBP26.86■■□□□ 1.89
IRF3-221ENST00000598808 PKD1L3Q7Z443 1732 aa26.85■■□□□ 1.89
IRF3-221ENST00000598808 KDRP35968 1356 aa26.84■■□□□ 1.89
IRF3-221ENST00000598808 TRIM37O94972 964 aa26.83■■□□□ 1.89
IRF3-221ENST00000598808 PLEKHO1Q53GL0 409 aaPredicted RBP26.83■■□□□ 1.89
IRF3-221ENST00000598808 TNS1Q9HBL0 1735 aaKnown RBP26.83■■□□□ 1.89
IRF3-221ENST00000598808 ACSBG1Q96GR2 724 aa26.81■■□□□ 1.88
IRF3-221ENST00000598808 DEFB132Q7Z7B7 95 aa26.81■■□□□ 1.88
IRF3-221ENST00000598808 ZNF530Q6P9A1 599 aaPredicted RBP26.8■■□□□ 1.88
IRF3-221ENST00000598808 AMOTQ4VCS5 1084 aa26.79■■□□□ 1.88
IRF3-221ENST00000598808 SYTL4Q96C24 671 aaPredicted RBP26.79■■□□□ 1.88
IRF3-221ENST00000598808 KAT6BQ8WYB5 2073 aa26.79■■□□□ 1.88
IRF3-221ENST00000598808 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.78■■□□□ 1.88
IRF3-221ENST00000598808 CYP27B1O15528 508 aa26.77■■□□□ 1.88
IRF3-221ENST00000598808 PRKAR2BP31323 418 aa26.77■■□□□ 1.88
IRF3-221ENST00000598808 WDR43Q15061 677 aaKnown RBP eCLIP26.77■■□□□ 1.88
IRF3-221ENST00000598808 DOT1LQ8TEK3 1739 aa26.77■■□□□ 1.88
IRF3-221ENST00000598808 C1orf141Q5JVX7 400 aa26.76■■□□□ 1.87
IRF3-221ENST00000598808 IFNL2Q8IZJ0 200 aa26.76■■□□□ 1.87
IRF3-221ENST00000598808 PLEKHG2Q9H7P9 1386 aa26.76■■□□□ 1.87
IRF3-221ENST00000598808 SBF2Q86WG5 1849 aa26.75■■□□□ 1.87
IRF3-221ENST00000598808 RSPH6AQ9H0K4 717 aa26.74■■□□□ 1.87
IRF3-221ENST00000598808 NEFMP07197 916 aa26.74■■□□□ 1.87
IRF3-221ENST00000598808 PHKG2P15735 406 aa26.74■■□□□ 1.87
IRF3-221ENST00000598808 BCL9O00512 1426 aa26.73■■□□□ 1.87
IRF3-221ENST00000598808 APBA3O96018 575 aa26.73■■□□□ 1.87
IRF3-221ENST00000598808 NHSQ6T4R5 1651 aa26.73■■□□□ 1.87
IRF3-221ENST00000598808 KCNQ2O43526 872 aa26.72■■□□□ 1.87
IRF3-221ENST00000598808 BAG6P46379 1132 aa26.72■■□□□ 1.87
IRF3-221ENST00000598808 FCHSD2O94868 740 aa26.71■■□□□ 1.87
IRF3-221ENST00000598808 PTF1AQ7RTS3 328 aa26.7■■□□□ 1.87
IRF3-221ENST00000598808 BCL11BQ9C0K0 894 aaPredicted RBP26.7■■□□□ 1.87
IRF3-221ENST00000598808 MRS2Q9HD23 443 aa26.7■■□□□ 1.87
IRF3-221ENST00000598808 PRIM1P49642 420 aaKnown RBP26.69■■□□□ 1.86
IRF3-221ENST00000598808 MTHFSDQ2M296 383 aaKnown RBP26.69■■□□□ 1.86
IRF3-221ENST00000598808 HSP90AB1P08238 724 aaKnown RBP26.68■■□□□ 1.86
IRF3-221ENST00000598808 MAPK8IP3Q9UPT6 1336 aa26.68■■□□□ 1.86
IRF3-221ENST00000598808 GAS2L2Q8NHY3 880 aa26.68■■□□□ 1.86
IRF3-221ENST00000598808 TOGARAM1Q9Y4F4 1720 aa26.67■■□□□ 1.86
IRF3-221ENST00000598808 CCDC184Q52MB2 194 aa26.67■■□□□ 1.86
IRF3-221ENST00000598808 PHACTR3Q96KR7 559 aa26.67■■□□□ 1.86
IRF3-221ENST00000598808 PNNQ9H307 717 aaKnown RBP26.67■■□□□ 1.86
IRF3-221ENST00000598808 EN1Q05925 392 aaPredicted RBP26.66■■□□□ 1.86
IRF3-221ENST00000598808 AKAP4Q5JQC9 854 aa26.66■■□□□ 1.86
IRF3-221ENST00000598808 MPRIPQ6WCQ1 1025 aa26.66■■□□□ 1.86
IRF3-221ENST00000598808 BTAF1O14981 1849 aa26.64■■□□□ 1.86
IRF3-221ENST00000598808 NKX1-1Q15270 411 aaPredicted RBP26.64■■□□□ 1.86
IRF3-221ENST00000598808 DCAF5Q96JK2 942 aa26.64■■□□□ 1.86
IRF3-221ENST00000598808 CCDC146Q8IYE0 955 aa26.63■■□□□ 1.85
IRF3-221ENST00000598808 MAP3K5Q99683 1374 aa26.62■■□□□ 1.85
IRF3-221ENST00000598808 SRCAPQ6ZRS2 3230 aa26.62■■□□□ 1.85
IRF3-221ENST00000598808 TMOD3Q9NYL9 352 aa26.62■■□□□ 1.85
IRF3-221ENST00000598808 KDM6AO15550 1401 aaPredicted RBP26.61■■□□□ 1.85
IRF3-221ENST00000598808 ADAMTS8Q9UP79 889 aa26.61■■□□□ 1.85
IRF3-221ENST00000598808 ITGB4P16144 1822 aa26.6■■□□□ 1.85
IRF3-221ENST00000598808 CCER2I3L3R5 266 aa26.6■■□□□ 1.85
IRF3-221ENST00000598808 RREB1Q92766 1687 aa26.6■■□□□ 1.85
IRF3-221ENST00000598808 GNAT3A8MTJ3 354 aa26.59■■□□□ 1.85
IRF3-221ENST00000598808 CENPBP07199 599 aaPredicted RBP26.59■■□□□ 1.85
IRF3-221ENST00000598808 CABP4P57796 275 aa26.59■■□□□ 1.85
IRF3-221ENST00000598808 EZH2Q15910 746 aaKnown RBP26.59■■□□□ 1.85
IRF3-221ENST00000598808 CAMKK2Q96RR4 588 aa26.59■■□□□ 1.85
IRF3-221ENST00000598808 PLEKHF1Q96S99 279 aa26.57■■□□□ 1.84
IRF3-221ENST00000598808 RTF1Q92541 710 aaKnown RBP26.56■■□□□ 1.84
IRF3-221ENST00000598808 SCN11AQ9UI33 1791 aa26.56■■□□□ 1.84
IRF3-221ENST00000598808 ERVV-2B6SEH9 535 aa26.55■■□□□ 1.84
IRF3-221ENST00000598808 RNMTO43148 476 aaKnown RBP26.55■■□□□ 1.84
IRF3-221ENST00000598808 LGR6Q9HBX8 967 aa26.55■■□□□ 1.84
IRF3-221ENST00000598808 VIRMAQ69YN4 1812 aaKnown RBP26.55■■□□□ 1.84
IRF3-221ENST00000598808 NUP188Q5SRE5 1749 aa26.55■■□□□ 1.84
IRF3-221ENST00000598808 PIGBQ92521 554 aa26.55■■□□□ 1.84
IRF3-221ENST00000598808 RGPD3A6NKT7 1758 aaPredicted RBP26.54■■□□□ 1.84
IRF3-221ENST00000598808 RGPD4Q7Z3J3 1758 aa26.54■■□□□ 1.84
IRF3-221ENST00000598808 RUNDC1Q96C34 613 aa26.54■■□□□ 1.84
IRF3-221ENST00000598808 NFE2L2Q16236 605 aa26.53■■□□□ 1.84
IRF3-221ENST00000598808 PLSCR1O15162 318 aa26.52■■□□□ 1.84
IRF3-221ENST00000598808 NEUROD2Q15784 382 aa26.52■■□□□ 1.84
IRF3-221ENST00000598808 RRP7AQ9Y3A4 280 aaKnown RBP26.52■■□□□ 1.84
IRF3-221ENST00000598808 TEFQ10587 303 aa26.51■■□□□ 1.83
IRF3-221ENST00000598808 FAM9BQ8IZU0 186 aa26.51■■□□□ 1.83
IRF3-221ENST00000598808 NFATC2IPQ8NCF5 419 aa26.51■■□□□ 1.83
IRF3-221ENST00000598808 MCM10Q7L590 875 aa26.5■■□□□ 1.83
IRF3-221ENST00000598808 PNISRQ8TF01 805 aaKnown RBP26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms