RNA–Protein interactions for RNA: ENST00000598607.1

GTF2F1-206, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 4

Gene GTF2F1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-206ENST00000598607 SBF2Q86WG5 1849 aa20.25■□□□□ 0.83
GTF2F1-206ENST00000598607 KDRP35968 1356 aa20.23■□□□□ 0.83
GTF2F1-206ENST00000598607 U2SURPO15042 1029 aaKnown RBP20.22■□□□□ 0.83
GTF2F1-206ENST00000598607 SULT6B1Q6IMI4 303 aa20.22■□□□□ 0.83
GTF2F1-206ENST00000598607 ZCRB1Q8TBF4 217 aaKnown RBP20.21■□□□□ 0.83
GTF2F1-206ENST00000598607 VIRMAQ69YN4 1812 aaKnown RBP20.2■□□□□ 0.82
GTF2F1-206ENST00000598607 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.19■□□□□ 0.82
GTF2F1-206ENST00000598607 FAM196AQ6ZSG2 479 aa20.18■□□□□ 0.82
GTF2F1-206ENST00000598607 AEBP1Q8IUX7 1158 aa20.18■□□□□ 0.82
GTF2F1-206ENST00000598607 SPG7Q9UQ90 795 aa20.18■□□□□ 0.82
GTF2F1-206ENST00000598607 PCDH11XQ9BZA7 1347 aa20.18■□□□□ 0.82
GTF2F1-206ENST00000598607 PCDH11YQ9BZA8 1340 aa20.18■□□□□ 0.82
GTF2F1-206ENST00000598607 HMOX1P09601 288 aa20.17■□□□□ 0.82
GTF2F1-206ENST00000598607 U2AF1L5P0DN76 240 aaPredicted RBP20.16■□□□□ 0.82
GTF2F1-206ENST00000598607 U2AF1Q01081 240 aaKnown RBP eCLIP20.16■□□□□ 0.82
GTF2F1-206ENST00000598607 AMOTQ4VCS5 1084 aa20.16■□□□□ 0.82
GTF2F1-206ENST00000598607 MARCH10Q8NA82 808 aaPredicted RBP20.16■□□□□ 0.82
GTF2F1-206ENST00000598607 BCL9O00512 1426 aa20.16■□□□□ 0.82
GTF2F1-206ENST00000598607 DOT1LQ8TEK3 1739 aa20.16■□□□□ 0.82
GTF2F1-206ENST00000598607 PLEKHO1Q53GL0 409 aaPredicted RBP20.15■□□□□ 0.82
GTF2F1-206ENST00000598607 DDX54Q8TDD1 881 aaKnown RBP20.15■□□□□ 0.82
GTF2F1-206ENST00000598607 NHSQ6T4R5 1651 aa20.14■□□□□ 0.81
GTF2F1-206ENST00000598607 FAM182BQ5T319 152 aa20.14■□□□□ 0.81
GTF2F1-206ENST00000598607 TNS1Q9HBL0 1735 aaKnown RBP20.13■□□□□ 0.81
GTF2F1-206ENST00000598607 FCHSD2O94868 740 aa20.13■□□□□ 0.81
GTF2F1-206ENST00000598607 ITGB4P16144 1822 aa20.13■□□□□ 0.81
GTF2F1-206ENST00000598607 PNNQ9H307 717 aaKnown RBP20.12■□□□□ 0.81
GTF2F1-206ENST00000598607 SCN11AQ9UI33 1791 aa20.11■□□□□ 0.81
GTF2F1-206ENST00000598607 CCDC125Q86Z20 511 aa20.11■□□□□ 0.81
GTF2F1-206ENST00000598607 IFNL2Q8IZJ0 200 aa20.11■□□□□ 0.81
GTF2F1-206ENST00000598607 RSPH6AQ9H0K4 717 aa20.11■□□□□ 0.81
GTF2F1-206ENST00000598607 DLG5Q8TDM6 1919 aa20.1■□□□□ 0.81
GTF2F1-206ENST00000598607 SOCS7O14512 581 aa20.1■□□□□ 0.81
GTF2F1-206ENST00000598607 NEFMP07197 916 aa20.1■□□□□ 0.81
GTF2F1-206ENST00000598607 WDR43Q15061 677 aaKnown RBP eCLIP20.1■□□□□ 0.81
GTF2F1-206ENST00000598607 DIEXFQ68CQ4 756 aaKnown RBP20.1■□□□□ 0.81
GTF2F1-206ENST00000598607 EP400Q96L91 3159 aa20.1■□□□□ 0.81
GTF2F1-206ENST00000598607 CYP27B1O15528 508 aa20.09■□□□□ 0.81
GTF2F1-206ENST00000598607 PRKAR2BP31323 418 aa20.09■□□□□ 0.81
GTF2F1-206ENST00000598607 UPF1Q92900 1129 aaKnown RBP eCLIP20.09■□□□□ 0.81
GTF2F1-206ENST00000598607 TOGARAM1Q9Y4F4 1720 aa20.09■□□□□ 0.81
GTF2F1-206ENST00000598607 BTAF1O14981 1849 aa20.09■□□□□ 0.81
GTF2F1-206ENST00000598607 PHKG2P15735 406 aa20.08■□□□□ 0.81
GTF2F1-206ENST00000598607 SF3B2Q13435 895 aaKnown RBP20.08■□□□□ 0.81
GTF2F1-206ENST00000598607 C1orf141Q5JVX7 400 aa20.08■□□□□ 0.81
GTF2F1-206ENST00000598607 ZNF530Q6P9A1 599 aaPredicted RBP20.08■□□□□ 0.81
GTF2F1-206ENST00000598607 HSP90AB1P08238 724 aaKnown RBP20.07■□□□□ 0.8
GTF2F1-206ENST00000598607 TRIM37O94972 964 aa20.06■□□□□ 0.8
GTF2F1-206ENST00000598607 NKX1-1Q15270 411 aaPredicted RBP20.06■□□□□ 0.8
GTF2F1-206ENST00000598607 GAS2L2Q8NHY3 880 aa20.06■□□□□ 0.8
GTF2F1-206ENST00000598607 MRS2Q9HD23 443 aa20.06■□□□□ 0.8
GTF2F1-206ENST00000598607 RGPD3A6NKT7 1758 aaPredicted RBP20.06■□□□□ 0.8
GTF2F1-206ENST00000598607 RGPD4Q7Z3J3 1758 aa20.06■□□□□ 0.8
GTF2F1-206ENST00000598607 MTHFSDQ2M296 383 aaKnown RBP20.04■□□□□ 0.8
GTF2F1-206ENST00000598607 AKAP4Q5JQC9 854 aa20.04■□□□□ 0.8
GTF2F1-206ENST00000598607 BCL11BQ9C0K0 894 aaPredicted RBP20.04■□□□□ 0.8
GTF2F1-206ENST00000598607 ADAMTS7Q9UKP4 1686 aa20.03■□□□□ 0.8
GTF2F1-206ENST00000598607 MAPK8IP3Q9UPT6 1336 aa20.03■□□□□ 0.8
GTF2F1-206ENST00000598607 CCDC184Q52MB2 194 aa20.03■□□□□ 0.8
GTF2F1-206ENST00000598607 ACSBG1Q96GR2 724 aa20.03■□□□□ 0.8
GTF2F1-206ENST00000598607 DCAF5Q96JK2 942 aa20.02■□□□□ 0.8
GTF2F1-206ENST00000598607 BAG6P46379 1132 aa20.01■□□□□ 0.79
GTF2F1-206ENST00000598607 PHACTR3Q96KR7 559 aa20.01■□□□□ 0.79
GTF2F1-206ENST00000598607 PLEKHF1Q96S99 279 aa20.01■□□□□ 0.79
GTF2F1-206ENST00000598607 MAP3K5Q99683 1374 aa20■□□□□ 0.79
GTF2F1-206ENST00000598607 SYTL4Q96C24 671 aaPredicted RBP20■□□□□ 0.79
GTF2F1-206ENST00000598607 ADAMTS8Q9UP79 889 aa20■□□□□ 0.79
GTF2F1-206ENST00000598607 KCNQ2O43526 872 aa19.99■□□□□ 0.79
GTF2F1-206ENST00000598607 PRIM1P49642 420 aaKnown RBP19.99■□□□□ 0.79
GTF2F1-206ENST00000598607 KDM6AO15550 1401 aaPredicted RBP19.99■□□□□ 0.79
GTF2F1-206ENST00000598607 GNAT3A8MTJ3 354 aa19.98■□□□□ 0.79
GTF2F1-206ENST00000598607 ERVV-2B6SEH9 535 aa19.98■□□□□ 0.79
GTF2F1-206ENST00000598607 APBA3O96018 575 aa19.98■□□□□ 0.79
GTF2F1-206ENST00000598607 PNISRQ8TF01 805 aaKnown RBP19.98■□□□□ 0.79
GTF2F1-206ENST00000598607 LY75O60449 1722 aa19.98■□□□□ 0.79
GTF2F1-206ENST00000598607 SIPA1L3O60292 1781 aaPredicted RBP19.98■□□□□ 0.79
GTF2F1-206ENST00000598607 CCER2I3L3R5 266 aa19.97■□□□□ 0.79
GTF2F1-206ENST00000598607 MPRIPQ6WCQ1 1025 aa19.97■□□□□ 0.79
GTF2F1-206ENST00000598607 RUNDC1Q96C34 613 aa19.97■□□□□ 0.79
GTF2F1-206ENST00000598607 RREB1Q92766 1687 aa19.97■□□□□ 0.79
GTF2F1-206ENST00000598607 TMOD3Q9NYL9 352 aa19.96■□□□□ 0.79
GTF2F1-206ENST00000598607 MRC1P22897 1456 aa19.95■□□□□ 0.78
GTF2F1-206ENST00000598607 NFE2L2Q16236 605 aa19.95■□□□□ 0.78
GTF2F1-206ENST00000598607 PLSCR1O15162 318 aa19.94■□□□□ 0.78
GTF2F1-206ENST00000598607 RNMTO43148 476 aaKnown RBP19.94■□□□□ 0.78
GTF2F1-206ENST00000598607 HTATSF1O43719 755 aaKnown RBP19.94■□□□□ 0.78
GTF2F1-206ENST00000598607 CABP4P57796 275 aa19.94■□□□□ 0.78
GTF2F1-206ENST00000598607 PTF1AQ7RTS3 328 aa19.94■□□□□ 0.78
GTF2F1-206ENST00000598607 CCDC146Q8IYE0 955 aa19.94■□□□□ 0.78
GTF2F1-206ENST00000598607 RTF1Q92541 710 aaKnown RBP19.94■□□□□ 0.78
GTF2F1-206ENST00000598607 DEFB132Q7Z7B7 95 aa19.92■□□□□ 0.78
GTF2F1-206ENST00000598607 PAPPAQ13219 1627 aa19.91■□□□□ 0.78
GTF2F1-206ENST00000598607 NUP188Q5SRE5 1749 aa19.91■□□□□ 0.78
GTF2F1-206ENST00000598607 EN1Q05925 392 aaPredicted RBP19.91■□□□□ 0.78
GTF2F1-206ENST00000598607 LGR6Q9HBX8 967 aa19.91■□□□□ 0.78
GTF2F1-206ENST00000598607 TMPOP42166 694 aaKnown RBP19.9■□□□□ 0.78
GTF2F1-206ENST00000598607 LMOD3Q0VAK6 560 aa19.9■□□□□ 0.78
GTF2F1-206ENST00000598607 PIGBQ92521 554 aa19.9■□□□□ 0.78
GTF2F1-206ENST00000598607 SMARCC1Q92922 1105 aaPredicted RBP19.9■□□□□ 0.78
GTF2F1-206ENST00000598607 SLC52A2Q9HAB3 445 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms