RNA–Protein interactions for RNA: ENST00000598580.1

GRAMD1A-209, Transcript of GRAM domain containing 1A, humanhuman

TSL 3

Gene GRAMD1A, Length 400 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-209ENST00000598580 PNPLA7Q6ZV29 1317 aa15.49■□□□□ 0.07
GRAMD1A-209ENST00000598580 ARXQ96QS3 562 aa15.49■□□□□ 0.07
GRAMD1A-209ENST00000598580 KAT6BQ8WYB5 2073 aa15.48■□□□□ 0.07
GRAMD1A-209ENST00000598580 TMF1P82094 1093 aa15.48■□□□□ 0.07
GRAMD1A-209ENST00000598580 TRIM26Q12899 539 aaPredicted RBP15.48■□□□□ 0.07
GRAMD1A-209ENST00000598580 SYTL4Q96C24 671 aaPredicted RBP15.48■□□□□ 0.07
GRAMD1A-209ENST00000598580 RGPD2P0DJD1 1756 aa15.48■□□□□ 0.07
GRAMD1A-209ENST00000598580 SLC27A3Q5K4L6 730 aa15.47■□□□□ 0.07
GRAMD1A-209ENST00000598580 SHANK3Q9BYB0 1731 aa15.46■□□□□ 0.06
GRAMD1A-209ENST00000598580 SLC24A1O60721 1099 aa15.45■□□□□ 0.06
GRAMD1A-209ENST00000598580 RTL1A6NKG5 1358 aa15.45■□□□□ 0.06
GRAMD1A-209ENST00000598580 EMILIN1Q9Y6C2 1016 aa15.44■□□□□ 0.06
GRAMD1A-209ENST00000598580 DCAF8L1A6NGE4 600 aa15.43■□□□□ 0.06
GRAMD1A-209ENST00000598580 CYP27B1O15528 508 aa15.43■□□□□ 0.06
GRAMD1A-209ENST00000598580 INSRP06213 1382 aa15.43■□□□□ 0.06
GRAMD1A-209ENST00000598580 MAP3K5Q99683 1374 aa15.42■□□□□ 0.06
GRAMD1A-209ENST00000598580 COL23A1Q86Y22 540 aaPredicted RBP15.42■□□□□ 0.06
GRAMD1A-209ENST00000598580 ZNF784Q8NCA9 323 aaPredicted RBP15.42■□□□□ 0.06
GRAMD1A-209ENST00000598580 TFCP2L1Q9NZI6 479 aa15.42■□□□□ 0.06
GRAMD1A-209ENST00000598580 CCNL1Q9UK58 526 aaPredicted RBP15.42■□□□□ 0.06
GRAMD1A-209ENST00000598580 AMIGO3Q86WK7 504 aa15.41■□□□□ 0.06
GRAMD1A-209ENST00000598580 NLGN2Q8NFZ4 835 aa15.41■□□□□ 0.06
GRAMD1A-209ENST00000598580 SLC16A10Q8TF71 515 aa15.41■□□□□ 0.06
GRAMD1A-209ENST00000598580 DOT1LQ8TEK3 1739 aa15.4■□□□□ 0.06
GRAMD1A-209ENST00000598580 TATP17735 454 aaPredicted RBP15.4■□□□□ 0.06
GRAMD1A-209ENST00000598580 RAPGEF4Q8WZA2 1011 aa15.4■□□□□ 0.06
GRAMD1A-209ENST00000598580 FLT4P35916 1363 aa15.39■□□□□ 0.05
GRAMD1A-209ENST00000598580 SMIM5Q71RC9 77 aa15.39■□□□□ 0.05
GRAMD1A-209ENST00000598580 NSD3Q9BZ95 1437 aa15.39■□□□□ 0.05
GRAMD1A-209ENST00000598580 CGNL1Q0VF96 1302 aa15.39■□□□□ 0.05
GRAMD1A-209ENST00000598580 TUBGCP6Q96RT7 1819 aa15.38■□□□□ 0.05
GRAMD1A-209ENST00000598580 LY75O60449 1722 aa15.37■□□□□ 0.05
GRAMD1A-209ENST00000598580 COL24A1Q17RW2 1714 aa15.37■□□□□ 0.05
GRAMD1A-209ENST00000598580 CDCA8Q53HL2 280 aa15.37■□□□□ 0.05
GRAMD1A-209ENST00000598580 MPRIPQ6WCQ1 1025 aa15.37■□□□□ 0.05
GRAMD1A-209ENST00000598580 KIF24Q5T7B8 1368 aa15.36■□□□□ 0.05
GRAMD1A-209ENST00000598580 MSL1Q68DK7 614 aa15.36■□□□□ 0.05
GRAMD1A-209ENST00000598580 KLHL34Q8N239 644 aa15.36■□□□□ 0.05
GRAMD1A-209ENST00000598580 PIGBQ92521 554 aa15.36■□□□□ 0.05
GRAMD1A-209ENST00000598580 EYA1Q99502 592 aa15.36■□□□□ 0.05
GRAMD1A-209ENST00000598580 POLKQ9UBT6 870 aa15.36■□□□□ 0.05
GRAMD1A-209ENST00000598580 GOLGB1Q14789 3259 aaKnown RBP15.35■□□□□ 0.05
GRAMD1A-209ENST00000598580 NCAPD2Q15021 1401 aa15.35■□□□□ 0.05
GRAMD1A-209ENST00000598580 PPM1GO15355 546 aaPredicted RBP15.35■□□□□ 0.05
GRAMD1A-209ENST00000598580 POLD1P28340 1107 aa15.35■□□□□ 0.05
GRAMD1A-209ENST00000598580 NKX1-1Q15270 411 aaPredicted RBP15.35■□□□□ 0.05
GRAMD1A-209ENST00000598580 WASHC2AQ641Q2 1341 aa15.35■□□□□ 0.05
GRAMD1A-209ENST00000598580 PCDH11XQ9BZA7 1347 aa15.35■□□□□ 0.05
GRAMD1A-209ENST00000598580 PCDH11YQ9BZA8 1340 aa15.35■□□□□ 0.05
GRAMD1A-209ENST00000598580 SMG6Q86US8 1419 aaKnown RBP15.34■□□□□ 0.05
GRAMD1A-209ENST00000598580 QSER1Q2KHR3 1735 aa15.34■□□□□ 0.05
GRAMD1A-209ENST00000598580 YBX3P16989 372 aaKnown RBP eCLIP15.34■□□□□ 0.05
GRAMD1A-209ENST00000598580 GPR162Q16538 588 aa15.34■□□□□ 0.05
GRAMD1A-209ENST00000598580 PALLDQ8WX93 1383 aa15.34■□□□□ 0.05
GRAMD1A-209ENST00000598580 MSH5O43196 834 aa15.33■□□□□ 0.04
GRAMD1A-209ENST00000598580 TIMELESSQ9UNS1 1208 aa15.33■□□□□ 0.04
GRAMD1A-209ENST00000598580 KIF20BQ96Q89 1820 aa15.32■□□□□ 0.04
GRAMD1A-209ENST00000598580 PCGF6Q9BYE7 350 aa15.32■□□□□ 0.04
GRAMD1A-209ENST00000598580 TOGARAM1Q9Y4F4 1720 aa15.31■□□□□ 0.04
GRAMD1A-209ENST00000598580 TNNT2P45379 298 aaPredicted RBP15.31■□□□□ 0.04
GRAMD1A-209ENST00000598580 EIF4A2Q14240 407 aaKnown RBP15.3■□□□□ 0.04
GRAMD1A-209ENST00000598580 PELP1Q8IZL8 1130 aaKnown RBP15.3■□□□□ 0.04
GRAMD1A-209ENST00000598580 LINC00116Q8NCU8 138 aa15.3■□□□□ 0.04
GRAMD1A-209ENST00000598580 ASAP1Q9ULH1 1129 aa15.3■□□□□ 0.04
GRAMD1A-209ENST00000598580 ITPK1Q13572 414 aa15.29■□□□□ 0.04
GRAMD1A-209ENST00000598580 POLR3GLQ9BT43 218 aa15.29■□□□□ 0.04
GRAMD1A-209ENST00000598580 HSPA5P11021 654 aaKnown RBP15.28■□□□□ 0.04
GRAMD1A-209ENST00000598580 PHKG2P15735 406 aa15.28■□□□□ 0.04
GRAMD1A-209ENST00000598580 SPG7Q9UQ90 795 aa15.28■□□□□ 0.04
GRAMD1A-209ENST00000598580 PKD1L3Q7Z443 1732 aa15.27■□□□□ 0.04
GRAMD1A-209ENST00000598580 LOC102724428A0A0B4J2F2 783 aa15.27■□□□□ 0.04
GRAMD1A-209ENST00000598580 SIK1P57059 783 aa15.27■□□□□ 0.04
GRAMD1A-209ENST00000598580 SMARCC1Q92922 1105 aaPredicted RBP15.27■□□□□ 0.04
GRAMD1A-209ENST00000598580 SLC4A9Q96Q91 983 aa15.27■□□□□ 0.04
GRAMD1A-209ENST00000598580 PANK3Q9H999 370 aa15.27■□□□□ 0.04
GRAMD1A-209ENST00000598580 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.27■□□□□ 0.042e-6■□□□□ 9.5
GRAMD1A-209ENST00000598580 ANKRD26Q9UPS8 1709 aa15.26■□□□□ 0.03
GRAMD1A-209ENST00000598580 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.26■□□□□ 0.03
GRAMD1A-209ENST00000598580 PHF14O94880 888 aa15.26■□□□□ 0.03
GRAMD1A-209ENST00000598580 ATG3Q9NT62 314 aa15.26■□□□□ 0.03
GRAMD1A-209ENST00000598580 ITGB4P16144 1822 aa15.26■□□□□ 0.03
GRAMD1A-209ENST00000598580 C5P01031 1676 aa15.25■□□□□ 0.03
GRAMD1A-209ENST00000598580 CHD4Q14839 1912 aa15.25■□□□□ 0.03
GRAMD1A-209ENST00000598580 MAP2P11137 1827 aaKnown RBP15.24■□□□□ 0.03
GRAMD1A-209ENST00000598580 TAF1LQ8IZX4 1826 aa15.24■□□□□ 0.03
GRAMD1A-209ENST00000598580 C4BP0C0L5 1744 aa15.24■□□□□ 0.03
GRAMD1A-209ENST00000598580 C1QTNF8P60827 252 aa15.24■□□□□ 0.03
GRAMD1A-209ENST00000598580 IFNL2Q8IZJ0 200 aa15.24■□□□□ 0.03
GRAMD1A-209ENST00000598580 FLAD1Q8NFF5 587 aa15.24■□□□□ 0.03
GRAMD1A-209ENST00000598580 AK7Q96M32 723 aa15.24■□□□□ 0.03
GRAMD1A-209ENST00000598580 TMOD3Q9NYL9 352 aa15.24■□□□□ 0.03
GRAMD1A-209ENST00000598580 CD2APQ9Y5K6 639 aa15.24■□□□□ 0.03
GRAMD1A-209ENST00000598580 IGSF1Q8N6C5 1336 aa15.23■□□□□ 0.03
GRAMD1A-209ENST00000598580 CLSPNQ9HAW4 1339 aa15.23■□□□□ 0.03
GRAMD1A-209ENST00000598580 AEBP1Q8IUX7 1158 aa15.22■□□□□ 0.03
GRAMD1A-209ENST00000598580 WWC3Q9ULE0 1092 aa15.22■□□□□ 0.03
GRAMD1A-209ENST00000598580 ATP6V1AP38606 617 aa15.21■□□□□ 0.03
GRAMD1A-209ENST00000598580 EIF4G2P78344 907 aaKnown RBP eCLIP15.21■□□□□ 0.03
GRAMD1A-209ENST00000598580 GNPATO15228 680 aa15.2■□□□□ 0.02
GRAMD1A-209ENST00000598580 GRIN3BO60391 1043 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms