RNA–Protein interactions for RNA: ENST00000597304.5

ZNF558-205, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 2,612 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-205ENST00000597304 ANKRD44Q8N8A2 993 aa15.42■□□□□ 0.06
ZNF558-205ENST00000597304 C8orf58Q8NAV2 365 aa15.42■□□□□ 0.06
ZNF558-205ENST00000597304 POGZQ7Z3K3 1410 aa15.41■□□□□ 0.06
ZNF558-205ENST00000597304 MBD3O95983 291 aa15.41■□□□□ 0.06
ZNF558-205ENST00000597304 SENP3Q9H4L4 574 aaPredicted RBP15.41■□□□□ 0.06
ZNF558-205ENST00000597304 ATP10DQ9P241 1426 aa15.41■□□□□ 0.06
ZNF558-205ENST00000597304 MTERF4Q7Z6M4 381 aaKnown RBP15.41■□□□□ 0.06
ZNF558-205ENST00000597304 OTUD7AQ8TE49 926 aaPredicted RBP15.41■□□□□ 0.06
ZNF558-205ENST00000597304 DYNC1I1O14576 645 aa15.4■□□□□ 0.06
ZNF558-205ENST00000597304 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.4■□□□□ 0.06
ZNF558-205ENST00000597304 CABP1Q9NZU7 370 aa15.4■□□□□ 0.06
ZNF558-205ENST00000597304 RIMS2Q9UQ26 1411 aa15.4■□□□□ 0.06
ZNF558-205ENST00000597304 FBLN1P23142 703 aa15.4■□□□□ 0.06
ZNF558-205ENST00000597304 RPAP2Q8IXW5 612 aaPredicted RBP15.4■□□□□ 0.06
ZNF558-205ENST00000597304 MYO5BQ9ULV0 1848 aa15.4■□□□□ 0.06
ZNF558-205ENST00000597304 CDK19Q9BWU1 502 aa15.39■□□□□ 0.05
ZNF558-205ENST00000597304 SASS6Q6UVJ0 657 aa15.39■□□□□ 0.05
ZNF558-205ENST00000597304 ERC2O15083 957 aa15.38■□□□□ 0.05
ZNF558-205ENST00000597304 NSFL1CQ9UNZ2 370 aaKnown RBP15.38■□□□□ 0.05
ZNF558-205ENST00000597304 ARHGEF40Q8TER5 1519 aa15.38■□□□□ 0.05
ZNF558-205ENST00000597304 IDI1Q13907 227 aa15.38■□□□□ 0.05
ZNF558-205ENST00000597304 CEP85Q6P2H3 762 aa15.38■□□□□ 0.05
ZNF558-205ENST00000597304 CHAMP1Q96JM3 812 aa15.38■□□□□ 0.05
ZNF558-205ENST00000597304 APBB1O00213 710 aa15.37■□□□□ 0.05
ZNF558-205ENST00000597304 SMARCA5O60264 1052 aaPredicted RBP15.37■□□□□ 0.05
ZNF558-205ENST00000597304 FOXD4L5Q5VV16 416 aaPredicted RBP15.37■□□□□ 0.05
ZNF558-205ENST00000597304 RNF214Q8ND24 703 aa15.37■□□□□ 0.05
ZNF558-205ENST00000597304 FOXD4L4Q8WXT5 416 aaPredicted RBP15.37■□□□□ 0.05
ZNF558-205ENST00000597304 IL13P35225 146 aa15.36■□□□□ 0.05
ZNF558-205ENST00000597304 ATP7BP35670 1465 aa15.36■□□□□ 0.05
ZNF558-205ENST00000597304 CDK12Q9NYV4 1490 aaPredicted RBP15.36■□□□□ 0.05
ZNF558-205ENST00000597304 PTMAP06454 111 aaKnown RBP15.36■□□□□ 0.05
ZNF558-205ENST00000597304 EMILIN1Q9Y6C2 1016 aa15.36■□□□□ 0.05
ZNF558-205ENST00000597304 CPSF1Q10570 1443 aaKnown RBP15.35■□□□□ 0.05
ZNF558-205ENST00000597304 MSH6P52701 1360 aa15.35■□□□□ 0.05
ZNF558-205ENST00000597304 TSPY26PQ9H489 355 aa15.35■□□□□ 0.05
ZNF558-205ENST00000597304 RGS12O14924 1447 aa15.35■□□□□ 0.05
ZNF558-205ENST00000597304 RTL1A6NKG5 1358 aa15.35■□□□□ 0.05
ZNF558-205ENST00000597304 MCM2P49736 904 aa15.35■□□□□ 0.05
ZNF558-205ENST00000597304 SYAP1Q96A49 352 aaPredicted RBP15.35■□□□□ 0.05
ZNF558-205ENST00000597304 TMX3Q96JJ7 454 aa15.35■□□□□ 0.05
ZNF558-205ENST00000597304 FAM83GA6ND36 823 aa15.34■□□□□ 0.05
ZNF558-205ENST00000597304 NEK4P51957 841 aa15.34■□□□□ 0.05
ZNF558-205ENST00000597304 HAP1P54257 671 aaPredicted RBP15.34■□□□□ 0.05
ZNF558-205ENST00000597304 KIAA2012Q0VF49 1180 aa15.34■□□□□ 0.05
ZNF558-205ENST00000597304 SLC52A1Q9NWF4 448 aa15.34■□□□□ 0.05
ZNF558-205ENST00000597304 BRD1O95696 1058 aa15.34■□□□□ 0.05
ZNF558-205ENST00000597304 TMEM131LA2VDJ0 1609 aa15.33■□□□□ 0.04
ZNF558-205ENST00000597304 DCTN1Q14203 1278 aa15.32■□□□□ 0.04
ZNF558-205ENST00000597304 PRDM4Q9UKN5 801 aa15.32■□□□□ 0.04
ZNF558-205ENST00000597304 PHF14O94880 888 aa15.31■□□□□ 0.04
ZNF558-205ENST00000597304 MEIS3Q99687 375 aa15.31■□□□□ 0.04
ZNF558-205ENST00000597304 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.31■□□□□ 0.04
ZNF558-205ENST00000597304 ALKQ9UM73 1620 aa15.31■□□□□ 0.04
ZNF558-205ENST00000597304 HMMRO75330 724 aa15.31■□□□□ 0.04
ZNF558-205ENST00000597304 MCCP23508 829 aa15.31■□□□□ 0.04
ZNF558-205ENST00000597304 CUL4AQ13619 759 aa15.31■□□□□ 0.04
ZNF558-205ENST00000597304 SMAP1Q8IYB5 467 aaPredicted RBP15.31■□□□□ 0.04
ZNF558-205ENST00000597304 OSBPL3Q9H4L5 887 aa15.31■□□□□ 0.04
ZNF558-205ENST00000597304 PTPRCP08575 1304 aa15.31■□□□□ 0.04
ZNF558-205ENST00000597304 ARID3AQ99856 593 aa15.3■□□□□ 0.04
ZNF558-205ENST00000597304 PDE1AP54750 535 aa15.3■□□□□ 0.04
ZNF558-205ENST00000597304 INTS4Q96HW7 963 aaKnown RBP15.3■□□□□ 0.04
ZNF558-205ENST00000597304 AATKQ6ZMQ8 1374 aa15.3■□□□□ 0.04
ZNF558-205ENST00000597304 DNTTIP2Q5QJE6 756 aaKnown RBP15.3■□□□□ 0.04
ZNF558-205ENST00000597304 EDC4Q6P2E9 1401 aaKnown RBP15.29■□□□□ 0.04
ZNF558-205ENST00000597304 PREX1Q8TCU6 1659 aa15.29■□□□□ 0.04
ZNF558-205ENST00000597304 KRT24Q2M2I5 525 aa15.28■□□□□ 0.04
ZNF558-205ENST00000597304 MYRIPQ8NFW9 859 aa15.28■□□□□ 0.04
ZNF558-205ENST00000597304 NME9Q86XW9 330 aa15.28■□□□□ 0.04
ZNF558-205ENST00000597304 FAM184AQ8NB25 1140 aa15.28■□□□□ 0.04
ZNF558-205ENST00000597304 ESYT1Q9BSJ8 1104 aa15.28■□□□□ 0.04
ZNF558-205ENST00000597304 DIP2CQ9Y2E4 1556 aa15.28■□□□□ 0.04
ZNF558-205ENST00000597304 TUBGCP6Q96RT7 1819 aa15.27■□□□□ 0.04
ZNF558-205ENST00000597304 ANAPC15P60006 121 aa15.27■□□□□ 0.04
ZNF558-205ENST00000597304 NOL8Q76FK4 1167 aaKnown RBP15.27■□□□□ 0.04
ZNF558-205ENST00000597304 KIAA0232Q92628 1395 aa15.27■□□□□ 0.03
ZNF558-205ENST00000597304 UVSSAQ2YD98 709 aa15.27■□□□□ 0.03
ZNF558-205ENST00000597304 PRIMPOLQ96LW4 560 aa15.26■□□□□ 0.03
ZNF558-205ENST00000597304 CCDC94Q9BW85 323 aaPredicted RBP15.26■□□□□ 0.03
ZNF558-205ENST00000597304 DLC1Q96QB1 1528 aa15.26■□□□□ 0.03
ZNF558-205ENST00000597304 RRS1Q15050 365 aaKnown RBP15.26■□□□□ 0.03
ZNF558-205ENST00000597304 PIBF1Q8WXW3 757 aa15.26■□□□□ 0.03
ZNF558-205ENST00000597304 PALD1Q9ULE6 856 aa15.26■□□□□ 0.03
ZNF558-205ENST00000597304 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.25■□□□□ 0.03
ZNF558-205ENST00000597304 SSH2Q76I76 1423 aa15.25■□□□□ 0.03
ZNF558-205ENST00000597304 CHL1O00533 1208 aa15.25■□□□□ 0.03
ZNF558-205ENST00000597304 GADD45BO75293 160 aaPredicted RBP15.25■□□□□ 0.03
ZNF558-205ENST00000597304 HMGN5P82970 282 aaKnown RBP15.25■□□□□ 0.03
ZNF558-205ENST00000597304 FOXD4L6Q3SYB3 417 aaPredicted RBP15.25■□□□□ 0.03
ZNF558-205ENST00000597304 FOXD4L3Q6VB84 417 aaPredicted RBP15.25■□□□□ 0.03
ZNF558-205ENST00000597304 COG3Q96JB2 828 aa15.25■□□□□ 0.03
ZNF558-205ENST00000597304 GDPD2Q9HCC8 539 aa15.25■□□□□ 0.03
ZNF558-205ENST00000597304 ANO2Q9NQ90 1003 aa15.25■□□□□ 0.03
ZNF558-205ENST00000597304 ZRANB1Q9UGI0 708 aa15.25■□□□□ 0.03
ZNF558-205ENST00000597304 WDR33Q9C0J8 1336 aaKnown RBP15.25■□□□□ 0.03
ZNF558-205ENST00000597304 ZBTB7CA1YPR0 619 aa15.24■□□□□ 0.03
ZNF558-205ENST00000597304 USP48Q86UV5 1035 aa15.24■□□□□ 0.03
ZNF558-205ENST00000597304 USP25Q9UHP3 1055 aa15.24■□□□□ 0.03
ZNF558-205ENST00000597304 TSHZ3Q63HK5 1081 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms