RNA–Protein interactions for RNA: ENST00000596554.5

C19orf48-206, Transcript of chromosome 19 open reading frame 48, humanhuman

TSL 3

Gene C19orf48, Length 727 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf48-206ENST00000596554 NSD2O96028 1365 aa18.3■□□□□ 0.52
C19orf48-206ENST00000596554 FBLN1P23142 703 aa18.28■□□□□ 0.52
C19orf48-206ENST00000596554 AMPHP49418 695 aa18.28■□□□□ 0.52
C19orf48-206ENST00000596554 SLC16A10Q8TF71 515 aa18.28■□□□□ 0.52
C19orf48-206ENST00000596554 KIF20BQ96Q89 1820 aa18.28■□□□□ 0.52
C19orf48-206ENST00000596554 PRIM1P49642 420 aaKnown RBP18.27■□□□□ 0.52
C19orf48-206ENST00000596554 PNPLA7Q6ZV29 1317 aa18.26■□□□□ 0.51
C19orf48-206ENST00000596554 GOLGB1Q14789 3259 aaKnown RBP18.26■□□□□ 0.51
C19orf48-206ENST00000596554 ZNF784Q8NCA9 323 aaPredicted RBP18.26■□□□□ 0.51
C19orf48-206ENST00000596554 ZCRB1Q8TBF4 217 aaKnown RBP18.26■□□□□ 0.51
C19orf48-206ENST00000596554 CGNL1Q0VF96 1302 aa18.25■□□□□ 0.51
C19orf48-206ENST00000596554 FYB1O15117 783 aa18.25■□□□□ 0.51
C19orf48-206ENST00000596554 NBPF6Q5VWK0 638 aa18.24■□□□□ 0.51
C19orf48-206ENST00000596554 SYTL4Q96C24 671 aaPredicted RBP18.24■□□□□ 0.51
C19orf48-206ENST00000596554 NBPF4Q96M43 638 aa18.24■□□□□ 0.51
C19orf48-206ENST00000596554 USP47Q96K76 1375 aa18.23■□□□□ 0.51
C19orf48-206ENST00000596554 RRS1Q15050 365 aaKnown RBP18.23■□□□□ 0.51
C19orf48-206ENST00000596554 KIF24Q5T7B8 1368 aa18.22■□□□□ 0.51
C19orf48-206ENST00000596554 KCNQ4P56696 695 aa18.22■□□□□ 0.51
C19orf48-206ENST00000596554 TMF1P82094 1093 aa18.22■□□□□ 0.51
C19orf48-206ENST00000596554 GGNBP2Q9H3C7 697 aa18.22■□□□□ 0.51
C19orf48-206ENST00000596554 TFCP2L1Q9NZI6 479 aa18.22■□□□□ 0.51
C19orf48-206ENST00000596554 SMG6Q86US8 1419 aaKnown RBP18.22■□□□□ 0.51
C19orf48-206ENST00000596554 INSRP06213 1382 aa18.21■□□□□ 0.51
C19orf48-206ENST00000596554 POLD1P28340 1107 aa18.21■□□□□ 0.51
C19orf48-206ENST00000596554 C5P01031 1676 aa18.21■□□□□ 0.51
C19orf48-206ENST00000596554 TAF1LQ8IZX4 1826 aa18.21■□□□□ 0.51
C19orf48-206ENST00000596554 CCNL1Q9UK58 526 aaPredicted RBP18.2■□□□□ 0.5
C19orf48-206ENST00000596554 FLT4P35916 1363 aa18.19■□□□□ 0.5
C19orf48-206ENST00000596554 RAPGEF4Q8WZA2 1011 aa18.19■□□□□ 0.5
C19orf48-206ENST00000596554 ITGB4P16144 1822 aa18.19■□□□□ 0.5
C19orf48-206ENST00000596554 PKD1L3Q7Z443 1732 aa18.18■□□□□ 0.5
C19orf48-206ENST00000596554 ANKRD26Q9UPS8 1709 aa18.18■□□□□ 0.5
C19orf48-206ENST00000596554 USHBP1Q8N6Y0 703 aa18.18■□□□□ 0.5
C19orf48-206ENST00000596554 TOGARAM1Q9Y4F4 1720 aa18.18■□□□□ 0.5
C19orf48-206ENST00000596554 CDCA8Q53HL2 280 aa18.17■□□□□ 0.5
C19orf48-206ENST00000596554 HSP90AB2PQ58FF8 381 aa18.17■□□□□ 0.5
C19orf48-206ENST00000596554 PCDH11XQ9BZA7 1347 aa18.17■□□□□ 0.5
C19orf48-206ENST00000596554 PCDH11YQ9BZA8 1340 aa18.17■□□□□ 0.5
C19orf48-206ENST00000596554 NCAPD2Q15021 1401 aa18.16■□□□□ 0.5
C19orf48-206ENST00000596554 TATP17735 454 aaPredicted RBP18.16■□□□□ 0.5
C19orf48-206ENST00000596554 GPR162Q16538 588 aa18.16■□□□□ 0.5
C19orf48-206ENST00000596554 COL23A1Q86Y22 540 aaPredicted RBP18.14■□□□□ 0.49
C19orf48-206ENST00000596554 CARD14Q9BXL6 1004 aa18.14■□□□□ 0.49
C19orf48-206ENST00000596554 KLHL34Q8N239 644 aa18.13■□□□□ 0.49
C19orf48-206ENST00000596554 NLGN2Q8NFZ4 835 aa18.13■□□□□ 0.49
C19orf48-206ENST00000596554 MAP2P11137 1827 aaKnown RBP18.12■□□□□ 0.49
C19orf48-206ENST00000596554 CYP27B1O15528 508 aa18.12■□□□□ 0.49
C19orf48-206ENST00000596554 HMGB2P26583 209 aaKnown RBP18.12■□□□□ 0.49
C19orf48-206ENST00000596554 PALLDQ8WX93 1383 aa18.12■□□□□ 0.49
C19orf48-206ENST00000596554 NSD3Q9BZ95 1437 aa18.12■□□□□ 0.49
C19orf48-206ENST00000596554 C4BP0C0L5 1744 aa18.12■□□□□ 0.49
C19orf48-206ENST00000596554 UBR3Q6ZT12 1888 aa18.12■□□□□ 0.49
C19orf48-206ENST00000596554 EMILIN1Q9Y6C2 1016 aa18.1■□□□□ 0.49
C19orf48-206ENST00000596554 C1QTNF8P60827 252 aa18.09■□□□□ 0.49
C19orf48-206ENST00000596554 FLAD1Q8NFF5 587 aa18.09■□□□□ 0.49
C19orf48-206ENST00000596554 MSH5O43196 834 aa18.08■□□□□ 0.48
C19orf48-206ENST00000596554 NKX1-1Q15270 411 aaPredicted RBP18.08■□□□□ 0.48
C19orf48-206ENST00000596554 MPRIPQ6WCQ1 1025 aa18.08■□□□□ 0.48
C19orf48-206ENST00000596554 WASHC2AQ641Q2 1341 aa18.07■□□□□ 0.48
C19orf48-206ENST00000596554 YBX3P16989 372 aaKnown RBP eCLIP18.07■□□□□ 0.48not detected■□□□□ 10.1
C19orf48-206ENST00000596554 TRIM26Q12899 539 aaPredicted RBP18.07■□□□□ 0.48
C19orf48-206ENST00000596554 PELP1Q8IZL8 1130 aaKnown RBP18.07■□□□□ 0.48
C19orf48-206ENST00000596554 SMARCC1Q92922 1105 aaPredicted RBP18.07■□□□□ 0.48
C19orf48-206ENST00000596554 GRIN3BO60391 1043 aa18.06■□□□□ 0.48
C19orf48-206ENST00000596554 MSL1Q68DK7 614 aa18.06■□□□□ 0.48
C19orf48-206ENST00000596554 TIMELESSQ9UNS1 1208 aa18.06■□□□□ 0.48
C19orf48-206ENST00000596554 CD2APQ9Y5K6 639 aa18.06■□□□□ 0.48
C19orf48-206ENST00000596554 PIGBQ92521 554 aa18.05■□□□□ 0.48
C19orf48-206ENST00000596554 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.05■□□□□ 0.48
C19orf48-206ENST00000596554 CEP350Q5VT06 3117 aa18.05■□□□□ 0.48
C19orf48-206ENST00000596554 SPG7Q9UQ90 795 aa18.04■□□□□ 0.48
C19orf48-206ENST00000596554 AMIGO3Q86WK7 504 aa18.03■□□□□ 0.48
C19orf48-206ENST00000596554 EYA1Q99502 592 aa18.03■□□□□ 0.48
C19orf48-206ENST00000596554 PLEKHG2Q9H7P9 1386 aa18.03■□□□□ 0.48
C19orf48-206ENST00000596554 SENP3-EIF4A1A0A087X0R7 540 aa18.02■□□□□ 0.48
C19orf48-206ENST00000596554 PPM1GO15355 546 aaPredicted RBP18.02■□□□□ 0.48
C19orf48-206ENST00000596554 AK7Q96M32 723 aa18.02■□□□□ 0.48
C19orf48-206ENST00000596554 GIGYF1O75420 1035 aaPredicted RBP18.01■□□□□ 0.47
C19orf48-206ENST00000596554 POLKQ9UBT6 870 aa18.01■□□□□ 0.47
C19orf48-206ENST00000596554 LOC102724428A0A0B4J2F2 783 aa18■□□□□ 0.47
C19orf48-206ENST00000596554 SIK1P57059 783 aa18■□□□□ 0.47
C19orf48-206ENST00000596554 ZNF831Q5JPB2 1677 aa17.99■□□□□ 0.47
C19orf48-206ENST00000596554 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.99■□□□□ 0.47
C19orf48-206ENST00000596554 SSFA2P28290 1259 aa17.99■□□□□ 0.47
C19orf48-206ENST00000596554 CLSPNQ9HAW4 1339 aa17.98■□□□□ 0.47
C19orf48-206ENST00000596554 PHKG2P15735 406 aa17.98■□□□□ 0.47
C19orf48-206ENST00000596554 LINC00116Q8NCU8 138 aa17.98■□□□□ 0.47
C19orf48-206ENST00000596554 TMOD3Q9NYL9 352 aa17.98■□□□□ 0.47
C19orf48-206ENST00000596554 IFNL2Q8IZJ0 200 aa17.97■□□□□ 0.47
C19orf48-206ENST00000596554 ASAP1Q9ULH1 1129 aa17.97■□□□□ 0.47
C19orf48-206ENST00000596554 KIF13BQ9NQT8 1826 aa17.97■□□□□ 0.47
C19orf48-206ENST00000596554 ADCY9O60503 1353 aa17.96■□□□□ 0.47
C19orf48-206ENST00000596554 PHF14O94880 888 aa17.96■□□□□ 0.47
C19orf48-206ENST00000596554 ITPK1Q13572 414 aa17.96■□□□□ 0.47
C19orf48-206ENST00000596554 EIF4A2Q14240 407 aaKnown RBP17.96■□□□□ 0.47
C19orf48-206ENST00000596554 ATP10DQ9P241 1426 aa17.96■□□□□ 0.47
C19orf48-206ENST00000596554 KDRP35968 1356 aa17.95■□□□□ 0.46
C19orf48-206ENST00000596554 SMIM5Q71RC9 77 aa17.95■□□□□ 0.46
C19orf48-206ENST00000596554 COL5A3P25940 1745 aaPredicted RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms