RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 MARF1Q9Y4F3 1742 aaKnown RBP28.53■■■□□ 2.16
SRRM1-222ENST00000596378 RGS12O14924 1447 aa28.52■■■□□ 2.16
SRRM1-222ENST00000596378 KDRP35968 1356 aa28.52■■■□□ 2.16
SRRM1-222ENST00000596378 IGSF1Q8N6C5 1336 aa28.52■■■□□ 2.16
SRRM1-222ENST00000596378 GCC1Q96CN9 775 aa28.52■■■□□ 2.16
SRRM1-222ENST00000596378 KIAA0232Q92628 1395 aa28.51■■■□□ 2.15
SRRM1-222ENST00000596378 C22orf23Q9BZE7 217 aa28.51■■■□□ 2.15
SRRM1-222ENST00000596378 SLKQ9H2G2 1235 aaPredicted RBP28.51■■■□□ 2.15
SRRM1-222ENST00000596378 FRAT2O75474 233 aaPredicted RBP28.49■■■□□ 2.15
SRRM1-222ENST00000596378 RTF1Q92541 710 aaKnown RBP28.49■■■□□ 2.15
SRRM1-222ENST00000596378 TBC1D2Q9BYX2 928 aa28.49■■■□□ 2.15
SRRM1-222ENST00000596378 ABTB2Q8N961 1025 aa28.49■■■□□ 2.15
SRRM1-222ENST00000596378 HOXC9P31274 260 aa28.47■■■□□ 2.15
SRRM1-222ENST00000596378 C14orf37Q86TY3 774 aa28.47■■■□□ 2.15
SRRM1-222ENST00000596378 TSPYL4Q9UJ04 414 aa28.47■■■□□ 2.15
SRRM1-222ENST00000596378 INTS3Q68E01 1043 aaKnown RBP28.47■■■□□ 2.15
SRRM1-222ENST00000596378 LTV1Q96GA3 475 aaPredicted RBP28.47■■■□□ 2.15
SRRM1-222ENST00000596378 BCL11AQ9H165 835 aa28.46■■■□□ 2.15
SRRM1-222ENST00000596378 SLC4A2P04920 1241 aa28.44■■■□□ 2.14
SRRM1-222ENST00000596378 HAP1P54257 671 aaPredicted RBP28.44■■■□□ 2.14
SRRM1-222ENST00000596378 MSH6P52701 1360 aa28.44■■■□□ 2.14
SRRM1-222ENST00000596378 KIF24Q5T7B8 1368 aa28.44■■■□□ 2.14
SRRM1-222ENST00000596378 GAS2L2Q8NHY3 880 aa28.43■■■□□ 2.14
SRRM1-222ENST00000596378 CHD2O14647 1828 aaKnown RBP28.42■■■□□ 2.14
SRRM1-222ENST00000596378 BMP2KLQ5H9B9 411 aa28.42■■■□□ 2.14
SRRM1-222ENST00000596378 NWD1Q149M9 1564 aa28.42■■■□□ 2.14
SRRM1-222ENST00000596378 G2E3Q7L622 706 aa28.41■■■□□ 2.14
SRRM1-222ENST00000596378 ANKLE2Q86XL3 938 aa28.41■■■□□ 2.14
SRRM1-222ENST00000596378 SPRYD3Q8NCJ5 442 aa28.41■■■□□ 2.14
SRRM1-222ENST00000596378 PHF8Q9UPP1 1060 aa28.41■■■□□ 2.14
SRRM1-222ENST00000596378 ATP10DQ9P241 1426 aa28.4■■■□□ 2.14
SRRM1-222ENST00000596378 PTPRCP08575 1304 aa28.4■■■□□ 2.14
SRRM1-222ENST00000596378 USHBP1Q8N6Y0 703 aa28.39■■■□□ 2.14
SRRM1-222ENST00000596378 MEIS3Q99687 375 aa28.38■■■□□ 2.13
SRRM1-222ENST00000596378 ANTXR1Q9H6X2 564 aa28.38■■■□□ 2.13
SRRM1-222ENST00000596378 USP54Q70EL1 1684 aa28.38■■■□□ 2.13
SRRM1-222ENST00000596378 F6X3S4 739 aa28.37■■■□□ 2.13
SRRM1-222ENST00000596378 DCTPP1Q9H773 170 aa28.36■■■□□ 2.13
SRRM1-222ENST00000596378 ANKRD44Q8N8A2 993 aa28.36■■■□□ 2.13
SRRM1-222ENST00000596378 RTL1A6NKG5 1358 aa28.35■■■□□ 2.13
SRRM1-222ENST00000596378 GNAT3A8MTJ3 354 aa28.35■■■□□ 2.13
SRRM1-222ENST00000596378 CEP85Q6P2H3 762 aa28.35■■■□□ 2.13
SRRM1-222ENST00000596378 LRRC37A3O60309 1634 aa28.35■■■□□ 2.13
SRRM1-222ENST00000596378 LTN1O94822 1766 aa28.35■■■□□ 2.13
SRRM1-222ENST00000596378 SLC4A10Q6U841 1118 aa28.35■■■□□ 2.13
SRRM1-222ENST00000596378 C16orf71Q8IYS4 520 aaPredicted RBP28.33■■■□□ 2.13
SRRM1-222ENST00000596378 NECTIN2Q92692 538 aa28.33■■■□□ 2.13
SRRM1-222ENST00000596378 SETD1BQ9UPS6 1966 aaKnown RBP28.33■■■□□ 2.13
SRRM1-222ENST00000596378 ESCO1Q5FWF5 840 aa28.32■■■□□ 2.12
SRRM1-222ENST00000596378 IL17REQ8NFR9 667 aa28.32■■■□□ 2.12
SRRM1-222ENST00000596378 TBC1D9Q6ZT07 1266 aa28.32■■■□□ 2.12
SRRM1-222ENST00000596378 ZNF142P52746 1687 aaPredicted RBP28.32■■■□□ 2.12
SRRM1-222ENST00000596378 ZBTB7CA1YPR0 619 aa28.31■■■□□ 2.12
SRRM1-222ENST00000596378 GSE1Q14687 1217 aa28.31■■■□□ 2.12
SRRM1-222ENST00000596378 APBB1O00213 710 aa28.31■■■□□ 2.12
SRRM1-222ENST00000596378 PLEKHM2Q8IWE5 1019 aa28.31■■■□□ 2.12
SRRM1-222ENST00000596378 MAP3K5Q99683 1374 aa28.3■■■□□ 2.12
SRRM1-222ENST00000596378 HTATSF1O43719 755 aaKnown RBP28.3■■■□□ 2.12
SRRM1-222ENST00000596378 GSPT1P15170 499 aaKnown RBP28.3■■■□□ 2.12
SRRM1-222ENST00000596378 RBM25P49756 843 aaKnown RBP28.3■■■□□ 2.12
SRRM1-222ENST00000596378 RPAP2Q8IXW5 612 aaPredicted RBP28.3■■■□□ 2.12
SRRM1-222ENST00000596378 PLEKHG5O94827 1062 aa28.29■■■□□ 2.12
SRRM1-222ENST00000596378 OTUD7AQ8TE49 926 aaPredicted RBP28.29■■■□□ 2.12
SRRM1-222ENST00000596378 SMARCA5O60264 1052 aaPredicted RBP28.28■■■□□ 2.12
SRRM1-222ENST00000596378 PSME1Q06323 249 aa28.28■■■□□ 2.12
SRRM1-222ENST00000596378 STK31Q9BXU1 1019 aa28.27■■■□□ 2.12
SRRM1-222ENST00000596378 ADGRL3Q9HAR2 1447 aa28.27■■■□□ 2.12
SRRM1-222ENST00000596378 FAM208AQ9UK61 1670 aaKnown RBP28.26■■■□□ 2.12
SRRM1-222ENST00000596378 NFAT5O94916 1531 aa28.26■■■□□ 2.11
SRRM1-222ENST00000596378 XPCQ01831 940 aaPredicted RBP28.25■■■□□ 2.11
SRRM1-222ENST00000596378 IP6K1Q92551 441 aa28.25■■■□□ 2.11
SRRM1-222ENST00000596378 NBPF6Q5VWK0 638 aa28.24■■■□□ 2.11
SRRM1-222ENST00000596378 NBPF4Q96M43 638 aa28.24■■■□□ 2.11
SRRM1-222ENST00000596378 HSCBQ8IWL3 235 aa28.24■■■□□ 2.11
SRRM1-222ENST00000596378 FLIIQ13045 1269 aa28.23■■■□□ 2.11
SRRM1-222ENST00000596378 CCT4P50991 539 aaKnown RBP28.23■■■□□ 2.11
SRRM1-222ENST00000596378 FKBP5Q13451 457 aaPredicted RBP28.23■■■□□ 2.11
SRRM1-222ENST00000596378 CDC45O75419 566 aa28.22■■■□□ 2.11
SRRM1-222ENST00000596378 TAF7Q15545 349 aaPredicted RBP28.22■■■□□ 2.11
SRRM1-222ENST00000596378 TTC22Q5TAA0 569 aa28.22■■■□□ 2.11
SRRM1-222ENST00000596378 CCDC30Q5VVM6 783 aa28.22■■■□□ 2.11
SRRM1-222ENST00000596378 ORAI2Q96SN7 254 aa28.22■■■□□ 2.11
SRRM1-222ENST00000596378 KIF2CQ99661 725 aa28.22■■■□□ 2.11
SRRM1-222ENST00000596378 ADAMTSL3P82987 1691 aa28.22■■■□□ 2.11
SRRM1-222ENST00000596378 RGPD2P0DJD1 1756 aa28.22■■■□□ 2.11
SRRM1-222ENST00000596378 LRRC59Q96AG4 307 aaKnown RBP28.2■■■□□ 2.1
SRRM1-222ENST00000596378 NPHP4O75161 1426 aaPredicted RBP28.19■■■□□ 2.1
SRRM1-222ENST00000596378 LGR6Q9HBX8 967 aa28.17■■■□□ 2.1
SRRM1-222ENST00000596378 RBM42Q9BTD8 480 aaKnown RBP28.15■■■□□ 2.1
SRRM1-222ENST00000596378 LMOD2Q6P5Q4 547 aa28.15■■■□□ 2.1
SRRM1-222ENST00000596378 HMMRO75330 724 aa28.14■■■□□ 2.1
SRRM1-222ENST00000596378 CD2BP2O95400 341 aaKnown RBP28.14■■■□□ 2.1
SRRM1-222ENST00000596378 GNAI2P04899 355 aa28.14■■■□□ 2.1
SRRM1-222ENST00000596378 KCNH5Q8NCM2 988 aa28.14■■■□□ 2.09
SRRM1-222ENST00000596378 SNX21Q969T3 373 aa28.14■■■□□ 2.09
SRRM1-222ENST00000596378 HDGFL1Q5TGJ6 251 aa28.13■■■□□ 2.09
SRRM1-222ENST00000596378 EXOC6BQ9Y2D4 811 aa28.13■■■□□ 2.09
SRRM1-222ENST00000596378 CEMIPQ8WUJ3 1361 aa28.13■■■□□ 2.09
SRRM1-222ENST00000596378 SDSP20132 328 aa28.12■■■□□ 2.09
SRRM1-222ENST00000596378 PHAXQ9H814 394 aaKnown RBP28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 178.8 ms