RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 FOXD4L5Q5VV16 416 aaPredicted RBP21.32■■□□□ 1
ARHGEF1-213ENST00000595897 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.32■■□□□ 1
ARHGEF1-213ENST00000595897 FOXD4L4Q8WXT5 416 aaPredicted RBP21.32■■□□□ 1
ARHGEF1-213ENST00000595897 RBM27Q9P2N5 1060 aaKnown RBP21.32■■□□□ 1
ARHGEF1-213ENST00000595897 ATP7BP35670 1465 aa21.31■■□□□ 1
ARHGEF1-213ENST00000595897 OFD1O75665 1012 aa21.31■■□□□ 1
ARHGEF1-213ENST00000595897 MEIS3Q99687 375 aa21.3■■□□□ 1
ARHGEF1-213ENST00000595897 ERC2O15083 957 aa21.3■■□□□ 1
ARHGEF1-213ENST00000595897 ALKQ9UM73 1620 aa21.3■■□□□ 1
ARHGEF1-213ENST00000595897 GPT2Q8TD30 523 aa21.29■■□□□ 1
ARHGEF1-213ENST00000595897 MSH6P52701 1360 aa21.28■■□□□ 1
ARHGEF1-213ENST00000595897 CDK12Q9NYV4 1490 aaPredicted RBP21.28■■□□□ 1
ARHGEF1-213ENST00000595897 MAP2P11137 1827 aaKnown RBP21.28■■□□□ 1
ARHGEF1-213ENST00000595897 MYO5BQ9ULV0 1848 aa21.28■■□□□ 1
ARHGEF1-213ENST00000595897 TMEM131LA2VDJ0 1609 aa21.28■■□□□ 1
ARHGEF1-213ENST00000595897 EDC4Q6P2E9 1401 aaKnown RBP21.28■■□□□ 1
ARHGEF1-213ENST00000595897 ATP10DQ9P241 1426 aa21.28■■□□□ 1
ARHGEF1-213ENST00000595897 CHAMP1Q96JM3 812 aa21.28■■□□□ 1
ARHGEF1-213ENST00000595897 HMMRO75330 724 aa21.27■■□□□ 1
ARHGEF1-213ENST00000595897 NEK4P51957 841 aa21.27■■□□□ 1
ARHGEF1-213ENST00000595897 DIP2CQ9Y2E4 1556 aa21.27■■□□□ 1
ARHGEF1-213ENST00000595897 HS1BP3Q53T59 392 aa21.27■■□□□ 1
ARHGEF1-213ENST00000595897 SULT6B1Q6IMI4 303 aa21.27■■□□□ 1
ARHGEF1-213ENST00000595897 MCM10Q7L590 875 aa21.27■■□□□ 1
ARHGEF1-213ENST00000595897 AEBP1Q8IUX7 1158 aa21.27■■□□□ 1
ARHGEF1-213ENST00000595897 ZDHHC9Q9Y397 364 aa21.27■■□□□ 1
ARHGEF1-213ENST00000595897 RTL1A6NKG5 1358 aa21.27■■□□□ 1
ARHGEF1-213ENST00000595897 WASLO00401 505 aaPredicted RBP21.27■□□□□ 0.99
ARHGEF1-213ENST00000595897 SYCE3A1L190 88 aa21.26■□□□□ 0.99
ARHGEF1-213ENST00000595897 SLC4A10Q6U841 1118 aa21.26■□□□□ 0.99
ARHGEF1-213ENST00000595897 KNDC1Q76NI1 1749 aa21.26■□□□□ 0.99
ARHGEF1-213ENST00000595897 YEATS2Q9ULM3 1422 aa21.26■□□□□ 0.99
ARHGEF1-213ENST00000595897 AATKQ6ZMQ8 1374 aa21.25■□□□□ 0.99
ARHGEF1-213ENST00000595897 NOL7Q9UMY1 257 aaKnown RBP21.25■□□□□ 0.99
ARHGEF1-213ENST00000595897 R3HCC1Q9Y3T6 440 aaKnown RBP21.25■□□□□ 0.99
ARHGEF1-213ENST00000595897 NCKAP5LQ9HCH0 1330 aa21.25■□□□□ 0.99
ARHGEF1-213ENST00000595897 SLC4A2P04920 1241 aa21.25■□□□□ 0.99
ARHGEF1-213ENST00000595897 ZMYND15Q9H091 742 aa21.25■□□□□ 0.99
ARHGEF1-213ENST00000595897 PTPRCP08575 1304 aa21.25■□□□□ 0.99
ARHGEF1-213ENST00000595897 PDCL3Q9H2J4 239 aa21.24■□□□□ 0.99
ARHGEF1-213ENST00000595897 NEO1Q92859 1461 aa21.24■□□□□ 0.99
ARHGEF1-213ENST00000595897 TMEM63CQ9P1W3 806 aa21.24■□□□□ 0.99
ARHGEF1-213ENST00000595897 NUDT16Q96DE0 195 aaKnown RBP21.24■□□□□ 0.99
ARHGEF1-213ENST00000595897 CHL1O00533 1208 aa21.23■□□□□ 0.99
ARHGEF1-213ENST00000595897 LRSAM1Q6UWE0 723 aa21.23■□□□□ 0.99
ARHGEF1-213ENST00000595897 PDLIM2Q96JY6 352 aa21.23■□□□□ 0.99
ARHGEF1-213ENST00000595897 XPCQ01831 940 aaPredicted RBP21.23■□□□□ 0.99
ARHGEF1-213ENST00000595897 CPSF1Q10570 1443 aaKnown RBP21.22■□□□□ 0.99
ARHGEF1-213ENST00000595897 TMX3Q96JJ7 454 aa21.22■□□□□ 0.99
ARHGEF1-213ENST00000595897 PDE1AP54750 535 aa21.22■□□□□ 0.99
ARHGEF1-213ENST00000595897 NOL8Q76FK4 1167 aaKnown RBP21.22■□□□□ 0.99
ARHGEF1-213ENST00000595897 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.22■□□□□ 0.99
ARHGEF1-213ENST00000595897 TXNDC2Q86VQ3 553 aa21.21■□□□□ 0.99
ARHGEF1-213ENST00000595897 RNF214Q8ND24 703 aa21.21■□□□□ 0.99
ARHGEF1-213ENST00000595897 CCDC61Q9Y6R9 512 aa21.21■□□□□ 0.99
ARHGEF1-213ENST00000595897 RGS12O14924 1447 aa21.21■□□□□ 0.99
ARHGEF1-213ENST00000595897 PKNOX2Q96KN3 472 aa21.21■□□□□ 0.99
ARHGEF1-213ENST00000595897 NSFL1CQ9UNZ2 370 aaKnown RBP21.21■□□□□ 0.99
ARHGEF1-213ENST00000595897 RBM10P98175 930 aaKnown RBP21.21■□□□□ 0.99
ARHGEF1-213ENST00000595897 TSHZ3Q63HK5 1081 aa21.21■□□□□ 0.99
ARHGEF1-213ENST00000595897 MBD3O95983 291 aa21.2■□□□□ 0.98
ARHGEF1-213ENST00000595897 EIF4A2Q14240 407 aaKnown RBP21.2■□□□□ 0.98
ARHGEF1-213ENST00000595897 PREX1Q8TCU6 1659 aa21.2■□□□□ 0.98
ARHGEF1-213ENST00000595897 MIS18AQ9NYP9 233 aa21.2■□□□□ 0.98
ARHGEF1-213ENST00000595897 F6X3S4 739 aa21.19■□□□□ 0.98
ARHGEF1-213ENST00000595897 MCCP23508 829 aa21.19■□□□□ 0.98
ARHGEF1-213ENST00000595897 EXOC6BQ9Y2D4 811 aa21.19■□□□□ 0.98
ARHGEF1-213ENST00000595897 ZNF500O60304 480 aaPredicted RBP21.19■□□□□ 0.98
ARHGEF1-213ENST00000595897 ZKSCAN5Q9Y2L8 839 aa21.18■□□□□ 0.98
ARHGEF1-213ENST00000595897 MCM2P49736 904 aa21.18■□□□□ 0.98
ARHGEF1-213ENST00000595897 FAM13BQ9NYF5 915 aa21.18■□□□□ 0.98
ARHGEF1-213ENST00000595897 TERF1P54274 439 aa21.18■□□□□ 0.98
ARHGEF1-213ENST00000595897 ANO2Q9NQ90 1003 aa21.18■□□□□ 0.98
ARHGEF1-213ENST00000595897 KIAA0232Q92628 1395 aa21.17■□□□□ 0.98
ARHGEF1-213ENST00000595897 FOXD4L6Q3SYB3 417 aaPredicted RBP21.17■□□□□ 0.98
ARHGEF1-213ENST00000595897 FOXD4L3Q6VB84 417 aaPredicted RBP21.17■□□□□ 0.98
ARHGEF1-213ENST00000595897 DLG5Q8TDM6 1919 aa21.17■□□□□ 0.98
ARHGEF1-213ENST00000595897 TRIM6-TRIM34B2RNG4 842 aa21.17■□□□□ 0.98
ARHGEF1-213ENST00000595897 RILPL2Q969X0 211 aa21.17■□□□□ 0.98
ARHGEF1-213ENST00000595897 OSBPL3Q9H4L5 887 aa21.17■□□□□ 0.98
ARHGEF1-213ENST00000595897 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.17■□□□□ 0.98
ARHGEF1-213ENST00000595897 PTMAP06454 111 aaKnown RBP21.16■□□□□ 0.98
ARHGEF1-213ENST00000595897 CCDC39Q9UFE4 941 aa21.16■□□□□ 0.98
ARHGEF1-213ENST00000595897 SOX12O15370 315 aa21.16■□□□□ 0.98
ARHGEF1-213ENST00000595897 CCT4P50991 539 aaKnown RBP21.15■□□□□ 0.98
ARHGEF1-213ENST00000595897 G2E3Q7L622 706 aa21.15■□□□□ 0.98
ARHGEF1-213ENST00000595897 ESYT1Q9BSJ8 1104 aa21.15■□□□□ 0.98
ARHGEF1-213ENST00000595897 GNAI2P04899 355 aa21.15■□□□□ 0.98
ARHGEF1-213ENST00000595897 CSPP1Q1MSJ5 1256 aa21.15■□□□□ 0.98
ARHGEF1-213ENST00000595897 DLC1Q96QB1 1528 aa21.14■□□□□ 0.98
ARHGEF1-213ENST00000595897 BRD1O95696 1058 aa21.14■□□□□ 0.97
ARHGEF1-213ENST00000595897 TSPYL4Q9UJ04 414 aa21.14■□□□□ 0.97
ARHGEF1-213ENST00000595897 CPS1P31327 1500 aa21.14■□□□□ 0.97
ARHGEF1-213ENST00000595897 RTF1Q92541 710 aaKnown RBP21.14■□□□□ 0.97
ARHGEF1-213ENST00000595897 SYAP1Q96A49 352 aaPredicted RBP21.14■□□□□ 0.97
ARHGEF1-213ENST00000595897 LRRCC1Q9C099 1032 aa21.14■□□□□ 0.97
ARHGEF1-213ENST00000595897 UQCRHLA0A096LP55 91 aa21.13■□□□□ 0.97
ARHGEF1-213ENST00000595897 UQCRHP07919 91 aa21.13■□□□□ 0.97
ARHGEF1-213ENST00000595897 MCM5P33992 734 aa21.13■□□□□ 0.97
ARHGEF1-213ENST00000595897 PALD1Q9ULE6 856 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms