RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 FCHSD2O94868 740 aa30.08■■■□□ 2.41
SNRNP70-204ENST00000595231 A0A0G2JS52 829 aa30.07■■■□□ 2.41
SNRNP70-204ENST00000595231 MYT1Q01538 1121 aa30.07■■■□□ 2.41
SNRNP70-204ENST00000595231 WDR43Q15061 677 aaKnown RBP eCLIP30.07■■■□□ 2.45e-7■■■□□ 16.9
SNRNP70-204ENST00000595231 ADAMTS8Q9UP79 889 aa30.07■■■□□ 2.4
SNRNP70-204ENST00000595231 LRRC37A3O60309 1634 aa30.07■■■□□ 2.4
SNRNP70-204ENST00000595231 EXOC5O00471 708 aa30.05■■■□□ 2.4
SNRNP70-204ENST00000595231 DDB1Q16531 1140 aa30.05■■■□□ 2.4
SNRNP70-204ENST00000595231 BRWD3Q6RI45 1802 aa30.05■■■□□ 2.4
SNRNP70-204ENST00000595231 PLEKHG2Q9H7P9 1386 aa30.04■■■□□ 2.4
SNRNP70-204ENST00000595231 PRKAR2BP31323 418 aa30.04■■■□□ 2.4
SNRNP70-204ENST00000595231 ZCRB1Q8TBF4 217 aaKnown RBP30.03■■■□□ 2.4
SNRNP70-204ENST00000595231 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.03■■■□□ 2.43e-14■□□□□ 10.9
SNRNP70-204ENST00000595231 TNS2Q63HR2 1409 aa30.02■■■□□ 2.4
SNRNP70-204ENST00000595231 PKD1L3Q7Z443 1732 aa30.02■■■□□ 2.4
SNRNP70-204ENST00000595231 PLEKHF1Q96S99 279 aa30.02■■■□□ 2.4
SNRNP70-204ENST00000595231 SHANK3Q9BYB0 1731 aa30.01■■■□□ 2.39
SNRNP70-204ENST00000595231 PHACTR3Q96KR7 559 aa30.01■■■□□ 2.39
SNRNP70-204ENST00000595231 PLEKHO1Q53GL0 409 aaPredicted RBP29.98■■■□□ 2.39
SNRNP70-204ENST00000595231 SPG7Q9UQ90 795 aa29.98■■■□□ 2.39
SNRNP70-204ENST00000595231 PDE3BQ13370 1112 aa29.98■■■□□ 2.39
SNRNP70-204ENST00000595231 AMOTQ4VCS5 1084 aa29.98■■■□□ 2.39
SNRNP70-204ENST00000595231 KRT27Q7Z3Y8 459 aa29.97■■■□□ 2.39
SNRNP70-204ENST00000595231 MARCH10Q8NA82 808 aaPredicted RBP29.97■■■□□ 2.39
SNRNP70-204ENST00000595231 CYP27B1O15528 508 aa29.96■■■□□ 2.39
SNRNP70-204ENST00000595231 MTHFSDQ2M296 383 aaKnown RBP29.95■■■□□ 2.39
SNRNP70-204ENST00000595231 DDX54Q8TDD1 881 aaKnown RBP29.95■■■□□ 2.39
SNRNP70-204ENST00000595231 PNNQ9H307 717 aaKnown RBP29.95■■■□□ 2.39
SNRNP70-204ENST00000595231 EP400Q96L91 3159 aa29.94■■■□□ 2.38
SNRNP70-204ENST00000595231 FAM9BQ8IZU0 186 aa29.94■■■□□ 2.38
SNRNP70-204ENST00000595231 PCDH11XQ9BZA7 1347 aa29.94■■■□□ 2.38
SNRNP70-204ENST00000595231 PCDH11YQ9BZA8 1340 aa29.94■■■□□ 2.38
SNRNP70-204ENST00000595231 FAM182BQ5T319 152 aa29.93■■■□□ 2.38
SNRNP70-204ENST00000595231 CCDC146Q8IYE0 955 aa29.93■■■□□ 2.38
SNRNP70-204ENST00000595231 RUNDC1Q96C34 613 aa29.91■■■□□ 2.38
SNRNP70-204ENST00000595231 PHKG2P15735 406 aa29.9■■■□□ 2.38
SNRNP70-204ENST00000595231 ZNF530Q6P9A1 599 aaPredicted RBP29.9■■■□□ 2.38
SNRNP70-204ENST00000595231 ILDR2Q71H61 639 aa29.89■■■□□ 2.38
SNRNP70-204ENST00000595231 IFNL2Q8IZJ0 200 aa29.89■■■□□ 2.38
SNRNP70-204ENST00000595231 GAS2L2Q8NHY3 880 aa29.88■■■□□ 2.37
SNRNP70-204ENST00000595231 NEFMP07197 916 aa29.87■■■□□ 2.37
SNRNP70-204ENST00000595231 NKX1-1Q15270 411 aaPredicted RBP29.87■■■□□ 2.37
SNRNP70-204ENST00000595231 MAPK8IP3Q9UPT6 1336 aa29.86■■■□□ 2.37
SNRNP70-204ENST00000595231 AKAP4Q5JQC9 854 aa29.85■■■□□ 2.37
SNRNP70-204ENST00000595231 C1orf141Q5JVX7 400 aa29.84■■■□□ 2.37
SNRNP70-204ENST00000595231 BCL9O00512 1426 aa29.84■■■□□ 2.37
SNRNP70-204ENST00000595231 NFE2L2Q16236 605 aa29.82■■■□□ 2.36
SNRNP70-204ENST00000595231 FAM196AQ6ZSG2 479 aa29.82■■■□□ 2.36
SNRNP70-204ENST00000595231 TMPOP42166 694 aaKnown RBP29.81■■■□□ 2.36
SNRNP70-204ENST00000595231 APAF1O14727 1248 aa29.8■■■□□ 2.36
SNRNP70-204ENST00000595231 DLG5Q8TDM6 1919 aa29.8■■■□□ 2.36
SNRNP70-204ENST00000595231 MAP3K5Q99683 1374 aa29.79■■■□□ 2.36
SNRNP70-204ENST00000595231 GNAT3A8MTJ3 354 aa29.79■■■□□ 2.36
SNRNP70-204ENST00000595231 MPRIPQ6WCQ1 1025 aa29.79■■■□□ 2.36
SNRNP70-204ENST00000595231 KDM6AO15550 1401 aaPredicted RBP29.79■■■□□ 2.36
SNRNP70-204ENST00000595231 HSP90AB1P08238 724 aaKnown RBP29.79■■■□□ 2.36
SNRNP70-204ENST00000595231 DCAF5Q96JK2 942 aa29.79■■■□□ 2.36
SNRNP70-204ENST00000595231 RRP7AQ9Y3A4 280 aaKnown RBP29.78■■■□□ 2.36
SNRNP70-204ENST00000595231 SBF2Q86WG5 1849 aa29.78■■■□□ 2.36
SNRNP70-204ENST00000595231 LGR6Q9HBX8 967 aa29.77■■■□□ 2.36
SNRNP70-204ENST00000595231 RIPK4P57078 832 aa29.76■■■□□ 2.36
SNRNP70-204ENST00000595231 TOGARAM1Q9Y4F4 1720 aa29.76■■■□□ 2.36
SNRNP70-204ENST00000595231 ADAMTS7Q9UKP4 1686 aa29.76■■■□□ 2.35
SNRNP70-204ENST00000595231 IL17REQ8NFR9 667 aa29.76■■■□□ 2.35
SNRNP70-204ENST00000595231 ACSBG1Q96GR2 724 aa29.75■■■□□ 2.35
SNRNP70-204ENST00000595231 KAT6BQ8WYB5 2073 aa29.75■■■□□ 2.35
SNRNP70-204ENST00000595231 SCN11AQ9UI33 1791 aa29.74■■■□□ 2.35
SNRNP70-204ENST00000595231 DOT1LQ8TEK3 1739 aa29.74■■■□□ 2.35
SNRNP70-204ENST00000595231 RNMTO43148 476 aaKnown RBP29.74■■■□□ 2.35
SNRNP70-204ENST00000595231 HTATSF1O43719 755 aaKnown RBP29.74■■■□□ 2.35
SNRNP70-204ENST00000595231 NEUROD2Q15784 382 aa29.74■■■□□ 2.35
SNRNP70-204ENST00000595231 VIRMAQ69YN4 1812 aaKnown RBP29.74■■■□□ 2.35
SNRNP70-204ENST00000595231 SENP3-EIF4A1A0A087X0R7 540 aa29.73■■■□□ 2.35
SNRNP70-204ENST00000595231 KCNQ2O43526 872 aa29.73■■■□□ 2.35
SNRNP70-204ENST00000595231 PTF1AQ7RTS3 328 aa29.72■■■□□ 2.35
SNRNP70-204ENST00000595231 PRIM1P49642 420 aaKnown RBP29.72■■■□□ 2.35
SNRNP70-204ENST00000595231 TRIM35Q9UPQ4 493 aa29.72■■■□□ 2.35
SNRNP70-204ENST00000595231 ERVV-2B6SEH9 535 aa29.71■■■□□ 2.35
SNRNP70-204ENST00000595231 DCTN1Q14203 1278 aa29.71■■■□□ 2.35
SNRNP70-204ENST00000595231 MCM10Q7L590 875 aa29.71■■■□□ 2.35
SNRNP70-204ENST00000595231 CEMIPQ8WUJ3 1361 aa29.71■■■□□ 2.35
SNRNP70-204ENST00000595231 RTF1Q92541 710 aaKnown RBP29.7■■■□□ 2.35
SNRNP70-204ENST00000595231 ITGB4P16144 1822 aa29.7■■■□□ 2.35
SNRNP70-204ENST00000595231 TRIM37O94972 964 aa29.69■■■□□ 2.34
SNRNP70-204ENST00000595231 NHSQ6T4R5 1651 aa29.69■■■□□ 2.34
SNRNP70-204ENST00000595231 SYTL4Q96C24 671 aaPredicted RBP29.67■■■□□ 2.34
SNRNP70-204ENST00000595231 BCL11BQ9C0K0 894 aaPredicted RBP29.67■■■□□ 2.34
SNRNP70-204ENST00000595231 NFATC2IPQ8NCF5 419 aa29.66■■■□□ 2.34
SNRNP70-204ENST00000595231 SLC52A2Q9HAB3 445 aa29.66■■■□□ 2.34
SNRNP70-204ENST00000595231 MRC1P22897 1456 aa29.65■■■□□ 2.34
SNRNP70-204ENST00000595231 LMOD3Q0VAK6 560 aa29.65■■■□□ 2.34
SNRNP70-204ENST00000595231 NCBP3Q53F19 620 aaKnown RBP29.65■■■□□ 2.34
SNRNP70-204ENST00000595231 PIGBQ92521 554 aa29.65■■■□□ 2.34
SNRNP70-204ENST00000595231 THUMPD2Q9BTF0 503 aaKnown RBP29.65■■■□□ 2.34
SNRNP70-204ENST00000595231 CABP4P57796 275 aa29.64■■■□□ 2.34
SNRNP70-204ENST00000595231 TMOD3Q9NYL9 352 aa29.63■■■□□ 2.33
SNRNP70-204ENST00000595231 CCDC27Q2M243 656 aa29.63■■■□□ 2.33
SNRNP70-204ENST00000595231 SALL2Q9Y467 1007 aaPredicted RBP29.61■■■□□ 2.33
SNRNP70-204ENST00000595231 SIPA1L3O60292 1781 aaPredicted RBP29.61■■■□□ 2.33
SNRNP70-204ENST00000595231 BTAF1O14981 1849 aa29.6■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms