RNA–Protein interactions for RNA: ENST00000594213.5

GTF2F1-203, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 1,002 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-203ENST00000594213 MEGF6O75095 1541 aa22.29■■□□□ 1.16
GTF2F1-203ENST00000594213 FAM208AQ9UK61 1670 aaKnown RBP22.28■■□□□ 1.16
GTF2F1-203ENST00000594213 TRIM26Q12899 539 aaPredicted RBP22.28■■□□□ 1.16
GTF2F1-203ENST00000594213 MAP3K5Q99683 1374 aa22.27■■□□□ 1.16
GTF2F1-203ENST00000594213 SLC16A10Q8TF71 515 aa22.27■■□□□ 1.16
GTF2F1-203ENST00000594213 KCNQ4P56696 695 aa22.26■■□□□ 1.15
GTF2F1-203ENST00000594213 CGNL1Q0VF96 1302 aa22.26■■□□□ 1.15
GTF2F1-203ENST00000594213 SYTL4Q96C24 671 aaPredicted RBP22.25■■□□□ 1.15
GTF2F1-203ENST00000594213 CARD14Q9BXL6 1004 aa22.25■■□□□ 1.15
GTF2F1-203ENST00000594213 PNPLA7Q6ZV29 1317 aa22.25■■□□□ 1.15
GTF2F1-203ENST00000594213 CDCA8Q53HL2 280 aa22.24■■□□□ 1.15
GTF2F1-203ENST00000594213 HSP90AB2PQ58FF8 381 aa22.24■■□□□ 1.15
GTF2F1-203ENST00000594213 USHBP1Q8N6Y0 703 aa22.24■■□□□ 1.15
GTF2F1-203ENST00000594213 INSRP06213 1382 aa22.24■■□□□ 1.15
GTF2F1-203ENST00000594213 KAT6BQ8WYB5 2073 aa22.23■■□□□ 1.15
GTF2F1-203ENST00000594213 KIF24Q5T7B8 1368 aa22.22■■□□□ 1.15
GTF2F1-203ENST00000594213 RAPGEF4Q8WZA2 1011 aa22.21■■□□□ 1.15
GTF2F1-203ENST00000594213 TFCP2L1Q9NZI6 479 aa22.2■■□□□ 1.14
GTF2F1-203ENST00000594213 TATP17735 454 aaPredicted RBP22.19■■□□□ 1.14
GTF2F1-203ENST00000594213 FLT4P35916 1363 aa22.19■■□□□ 1.14
GTF2F1-203ENST00000594213 SHANK3Q9BYB0 1731 aa22.18■■□□□ 1.14
GTF2F1-203ENST00000594213 CCNL1Q9UK58 526 aaPredicted RBP22.18■■□□□ 1.14
GTF2F1-203ENST00000594213 RGPD2P0DJD1 1756 aa22.17■■□□□ 1.14
GTF2F1-203ENST00000594213 SMG6Q86US8 1419 aaKnown RBP22.17■■□□□ 1.14
GTF2F1-203ENST00000594213 ZNF784Q8NCA9 323 aaPredicted RBP22.17■■□□□ 1.14
GTF2F1-203ENST00000594213 TIMELESSQ9UNS1 1208 aa22.17■■□□□ 1.14
GTF2F1-203ENST00000594213 CYP27B1O15528 508 aa22.16■■□□□ 1.14
GTF2F1-203ENST00000594213 EMILIN1Q9Y6C2 1016 aa22.16■■□□□ 1.14
GTF2F1-203ENST00000594213 POLD1P28340 1107 aa22.15■■□□□ 1.14
GTF2F1-203ENST00000594213 DOT1LQ8TEK3 1739 aa22.14■■□□□ 1.14
GTF2F1-203ENST00000594213 PCDH11XQ9BZA7 1347 aa22.14■■□□□ 1.14
GTF2F1-203ENST00000594213 PCDH11YQ9BZA8 1340 aa22.14■■□□□ 1.14
GTF2F1-203ENST00000594213 COL23A1Q86Y22 540 aaPredicted RBP22.14■■□□□ 1.13
GTF2F1-203ENST00000594213 NSD3Q9BZ95 1437 aa22.14■■□□□ 1.13
GTF2F1-203ENST00000594213 LY75O60449 1722 aa22.13■■□□□ 1.13
GTF2F1-203ENST00000594213 QSER1Q2KHR3 1735 aa22.13■■□□□ 1.13
GTF2F1-203ENST00000594213 NCAPD2Q15021 1401 aa22.13■■□□□ 1.13
GTF2F1-203ENST00000594213 COL24A1Q17RW2 1714 aa22.12■■□□□ 1.13
GTF2F1-203ENST00000594213 GOLGB1Q14789 3259 aaKnown RBP22.12■■□□□ 1.13
GTF2F1-203ENST00000594213 WASHC2AQ641Q2 1341 aa22.1■■□□□ 1.13
GTF2F1-203ENST00000594213 NKX1-1Q15270 411 aaPredicted RBP22.1■■□□□ 1.13
GTF2F1-203ENST00000594213 GPR162Q16538 588 aa22.09■■□□□ 1.13
GTF2F1-203ENST00000594213 NLGN2Q8NFZ4 835 aa22.09■■□□□ 1.13
GTF2F1-203ENST00000594213 MPRIPQ6WCQ1 1025 aa22.08■■□□□ 1.13
GTF2F1-203ENST00000594213 PALLDQ8WX93 1383 aa22.08■■□□□ 1.12
GTF2F1-203ENST00000594213 CLSPNQ9HAW4 1339 aa22.07■■□□□ 1.12
GTF2F1-203ENST00000594213 EYA1Q99502 592 aa22.07■■□□□ 1.12
GTF2F1-203ENST00000594213 POLKQ9UBT6 870 aa22.07■■□□□ 1.12
GTF2F1-203ENST00000594213 TUBGCP6Q96RT7 1819 aa22.06■■□□□ 1.12
GTF2F1-203ENST00000594213 KLHL34Q8N239 644 aa22.06■■□□□ 1.12
GTF2F1-203ENST00000594213 PIGBQ92521 554 aa22.06■■□□□ 1.12
GTF2F1-203ENST00000594213 PPM1GO15355 546 aaPredicted RBP22.05■■□□□ 1.12
GTF2F1-203ENST00000594213 HMGB2P26583 209 aaKnown RBP22.05■■□□□ 1.12
GTF2F1-203ENST00000594213 SMARCC1Q92922 1105 aaPredicted RBP22.05■■□□□ 1.12
GTF2F1-203ENST00000594213 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.05■■□□□ 1.125e-7■■■■■ 31.6
GTF2F1-203ENST00000594213 KIF20BQ96Q89 1820 aa22.05■■□□□ 1.12
GTF2F1-203ENST00000594213 MSH5O43196 834 aa22.04■■□□□ 1.12
GTF2F1-203ENST00000594213 FLAD1Q8NFF5 587 aa22.04■■□□□ 1.12
GTF2F1-203ENST00000594213 MSL1Q68DK7 614 aa22.03■■□□□ 1.12
GTF2F1-203ENST00000594213 AMIGO3Q86WK7 504 aa22.03■■□□□ 1.12
GTF2F1-203ENST00000594213 SPG7Q9UQ90 795 aa22.03■■□□□ 1.12
GTF2F1-203ENST00000594213 YBX3P16989 372 aaKnown RBP eCLIP22■■□□□ 1.11
GTF2F1-203ENST00000594213 EIF4A2Q14240 407 aaKnown RBP21.99■■□□□ 1.11
GTF2F1-203ENST00000594213 PKD1L3Q7Z443 1732 aa21.99■■□□□ 1.11
GTF2F1-203ENST00000594213 CHD4Q14839 1912 aa21.98■■□□□ 1.11
GTF2F1-203ENST00000594213 TOGARAM1Q9Y4F4 1720 aa21.98■■□□□ 1.11
GTF2F1-203ENST00000594213 PHKG2P15735 406 aa21.98■■□□□ 1.11
GTF2F1-203ENST00000594213 PELP1Q8IZL8 1130 aaKnown RBP21.98■■□□□ 1.11
GTF2F1-203ENST00000594213 CD2APQ9Y5K6 639 aa21.98■■□□□ 1.11
GTF2F1-203ENST00000594213 ANKRD26Q9UPS8 1709 aa21.97■■□□□ 1.11
GTF2F1-203ENST00000594213 LOC102724428A0A0B4J2F2 783 aa21.97■■□□□ 1.11
GTF2F1-203ENST00000594213 SIK1P57059 783 aa21.97■■□□□ 1.11
GTF2F1-203ENST00000594213 GRIN3BO60391 1043 aa21.96■■□□□ 1.11
GTF2F1-203ENST00000594213 SMIM5Q71RC9 77 aa21.96■■□□□ 1.11
GTF2F1-203ENST00000594213 IFNL2Q8IZJ0 200 aa21.96■■□□□ 1.11
GTF2F1-203ENST00000594213 LINC00116Q8NCU8 138 aa21.96■■□□□ 1.11
GTF2F1-203ENST00000594213 AK7Q96M32 723 aa21.96■■□□□ 1.11
GTF2F1-203ENST00000594213 PCGF6Q9BYE7 350 aa21.96■■□□□ 1.11
GTF2F1-203ENST00000594213 ASAP1Q9ULH1 1129 aa21.96■■□□□ 1.11
GTF2F1-203ENST00000594213 C5P01031 1676 aa21.95■■□□□ 1.1
GTF2F1-203ENST00000594213 C1QTNF8P60827 252 aa21.95■■□□□ 1.1
GTF2F1-203ENST00000594213 PLEKHG2Q9H7P9 1386 aa21.95■■□□□ 1.1
GTF2F1-203ENST00000594213 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.94■■□□□ 1.1
GTF2F1-203ENST00000594213 HSPA5P11021 654 aaKnown RBP21.94■■□□□ 1.1
GTF2F1-203ENST00000594213 ITPK1Q13572 414 aa21.94■■□□□ 1.1
GTF2F1-203ENST00000594213 TMOD3Q9NYL9 352 aa21.94■■□□□ 1.1
GTF2F1-203ENST00000594213 SSFA2P28290 1259 aa21.93■■□□□ 1.1
GTF2F1-203ENST00000594213 TNNT2P45379 298 aaPredicted RBP21.93■■□□□ 1.1
GTF2F1-203ENST00000594213 EIF4G2P78344 907 aaKnown RBP eCLIP21.93■■□□□ 1.1
GTF2F1-203ENST00000594213 IGSF1Q8N6C5 1336 aa21.93■■□□□ 1.1
GTF2F1-203ENST00000594213 POLR3GLQ9BT43 218 aa21.93■■□□□ 1.1
GTF2F1-203ENST00000594213 PANK3Q9H999 370 aa21.93■■□□□ 1.1
GTF2F1-203ENST00000594213 ATG3Q9NT62 314 aa21.93■■□□□ 1.1
GTF2F1-203ENST00000594213 C4BP0C0L5 1744 aa21.92■■□□□ 1.1
GTF2F1-203ENST00000594213 TAF1LQ8IZX4 1826 aa21.92■■□□□ 1.1
GTF2F1-203ENST00000594213 PHF14O94880 888 aa21.91■■□□□ 1.1
GTF2F1-203ENST00000594213 MAP2P11137 1827 aaKnown RBP21.91■■□□□ 1.1
GTF2F1-203ENST00000594213 ITGB4P16144 1822 aa21.91■■□□□ 1.1
GTF2F1-203ENST00000594213 SLC4A9Q96Q91 983 aa21.89■■□□□ 1.09
GTF2F1-203ENST00000594213 ERVV-2B6SEH9 535 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms