RNA–Protein interactions for RNA: ENST00000594116.1

LTBP4-209, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-209ENST00000594116 KIF24Q5T7B8 1368 aa23.27■■□□□ 1.32
LTBP4-209ENST00000594116 SMG6Q86US8 1419 aaKnown RBP23.27■■□□□ 1.32
LTBP4-209ENST00000594116 DDX54Q8TDD1 881 aaKnown RBP23.27■■□□□ 1.32
LTBP4-209ENST00000594116 CARD14Q9BXL6 1004 aa23.26■■□□□ 1.31
LTBP4-209ENST00000594116 DDX10Q13206 875 aaKnown RBP23.25■■□□□ 1.31
LTBP4-209ENST00000594116 INSRP06213 1382 aa23.25■■□□□ 1.31
LTBP4-209ENST00000594116 NSD3Q9BZ95 1437 aa23.25■■□□□ 1.31
LTBP4-209ENST00000594116 FLT4P35916 1363 aa23.24■■□□□ 1.31
LTBP4-209ENST00000594116 ANKRD26Q9UPS8 1709 aa23.23■■□□□ 1.31
LTBP4-209ENST00000594116 NBPF6Q5VWK0 638 aa23.23■■□□□ 1.31
LTBP4-209ENST00000594116 ZCRB1Q8TBF4 217 aaKnown RBP23.23■■□□□ 1.31
LTBP4-209ENST00000594116 NBPF4Q96M43 638 aa23.23■■□□□ 1.31
LTBP4-209ENST00000594116 CGNL1Q0VF96 1302 aa23.23■■□□□ 1.31
LTBP4-209ENST00000594116 PER1O15534 1290 aaPredicted RBP23.22■■□□□ 1.31
LTBP4-209ENST00000594116 ZBTB7AO95365 584 aa23.22■■□□□ 1.31
LTBP4-209ENST00000594116 QSER1Q2KHR3 1735 aa23.22■■□□□ 1.31
LTBP4-209ENST00000594116 LY75O60449 1722 aa23.21■■□□□ 1.31
LTBP4-209ENST00000594116 PTGER2P43116 358 aa23.2■■□□□ 1.3
LTBP4-209ENST00000594116 HSP90AB2PQ58FF8 381 aa23.2■■□□□ 1.3
LTBP4-209ENST00000594116 SLC27A3Q5K4L6 730 aa23.2■■□□□ 1.3
LTBP4-209ENST00000594116 LRRC4BQ9NT99 713 aa23.2■■□□□ 1.3
LTBP4-209ENST00000594116 NSD2O96028 1365 aa23.19■■□□□ 1.3
LTBP4-209ENST00000594116 MTFR1LQ9H019 292 aa23.19■■□□□ 1.3
LTBP4-209ENST00000594116 PRIM1P49642 420 aaKnown RBP23.18■■□□□ 1.3
LTBP4-209ENST00000594116 USHBP1Q8N6Y0 703 aa23.18■■□□□ 1.3
LTBP4-209ENST00000594116 RAPGEF4Q8WZA2 1011 aa23.18■■□□□ 1.3
LTBP4-209ENST00000594116 ATF5Q9Y2D1 282 aaPredicted RBP23.17■■□□□ 1.3
LTBP4-209ENST00000594116 NPC1L1Q9UHC9 1359 aa23.16■■□□□ 1.3
LTBP4-209ENST00000594116 ZNF827Q17R98 1081 aa23.16■■□□□ 1.3
LTBP4-209ENST00000594116 SYTL4Q96C24 671 aaPredicted RBP23.16■■□□□ 1.3
LTBP4-209ENST00000594116 MAP2P11137 1827 aaKnown RBP23.15■■□□□ 1.3
LTBP4-209ENST00000594116 TATP17735 454 aaPredicted RBP23.15■■□□□ 1.3
LTBP4-209ENST00000594116 SGIP1Q9BQI5 828 aa23.15■■□□□ 1.3
LTBP4-209ENST00000594116 KNSTRNQ9Y448 316 aa23.15■■□□□ 1.3
LTBP4-209ENST00000594116 EMILIN1Q9Y6C2 1016 aa23.15■■□□□ 1.3
LTBP4-209ENST00000594116 NCAPD2Q15021 1401 aa23.15■■□□□ 1.3
LTBP4-209ENST00000594116 PKD1L3Q7Z443 1732 aa23.14■■□□□ 1.3
LTBP4-209ENST00000594116 AMER1Q5JTC6 1135 aaPredicted RBP23.14■■□□□ 1.29
LTBP4-209ENST00000594116 AKT1S1Q96B36 256 aa23.14■■□□□ 1.29
LTBP4-209ENST00000594116 TUBGCP6Q96RT7 1819 aa23.14■■□□□ 1.29
LTBP4-209ENST00000594116 PCDH11XQ9BZA7 1347 aa23.13■■□□□ 1.29
LTBP4-209ENST00000594116 PCDH11YQ9BZA8 1340 aa23.13■■□□□ 1.29
LTBP4-209ENST00000594116 DCAF8L1A6NGE4 600 aa23.12■■□□□ 1.29
LTBP4-209ENST00000594116 COL24A1Q17RW2 1714 aa23.11■■□□□ 1.29
LTBP4-209ENST00000594116 TOGARAM1Q9Y4F4 1720 aa23.08■■□□□ 1.29
LTBP4-209ENST00000594116 SLC16A10Q8TF71 515 aa23.08■■□□□ 1.29
LTBP4-209ENST00000594116 PPM1GO15355 546 aaPredicted RBP23.07■■□□□ 1.28
LTBP4-209ENST00000594116 FHDC1Q9C0D6 1143 aaPredicted RBP23.07■■□□□ 1.28
LTBP4-209ENST00000594116 ITGB4P16144 1822 aa23.07■■□□□ 1.28
LTBP4-209ENST00000594116 PNPLA7Q6ZV29 1317 aa23.07■■□□□ 1.28
LTBP4-209ENST00000594116 MAP3K5Q99683 1374 aa23.06■■□□□ 1.28
LTBP4-209ENST00000594116 CYP27B1O15528 508 aa23.06■■□□□ 1.28
LTBP4-209ENST00000594116 KCNQ4P56696 695 aa23.06■■□□□ 1.28
LTBP4-209ENST00000594116 ARXQ96QS3 562 aa23.06■■□□□ 1.28
LTBP4-209ENST00000594116 SYT17Q9BSW7 474 aa23.06■■□□□ 1.28
LTBP4-209ENST00000594116 CCNL1Q9UK58 526 aaPredicted RBP23.06■■□□□ 1.28
LTBP4-209ENST00000594116 C5P01031 1676 aa23.06■■□□□ 1.28
LTBP4-209ENST00000594116 YY1P25490 414 aa23.05■■□□□ 1.28
LTBP4-209ENST00000594116 TFCP2L1Q9NZI6 479 aa23.05■■□□□ 1.28
LTBP4-209ENST00000594116 POLKQ9UBT6 870 aa23.05■■□□□ 1.28
LTBP4-209ENST00000594116 TAF1LQ8IZX4 1826 aa23.03■■□□□ 1.28
LTBP4-209ENST00000594116 EYA1Q99502 592 aa23.02■■□□□ 1.28
LTBP4-209ENST00000594116 UTRNP46939 3433 aa23.01■■□□□ 1.27
LTBP4-209ENST00000594116 CC2D1BQ5T0F9 858 aaKnown RBP23.01■■□□□ 1.27
LTBP4-209ENST00000594116 PALLDQ8WX93 1383 aa23.01■■□□□ 1.27
LTBP4-209ENST00000594116 PLEKHG2Q9H7P9 1386 aa23.01■■□□□ 1.27
LTBP4-209ENST00000594116 HMGB2P26583 209 aaKnown RBP23■■□□□ 1.27
LTBP4-209ENST00000594116 NKX1-1Q15270 411 aaPredicted RBP23■■□□□ 1.27
LTBP4-209ENST00000594116 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23■■□□□ 1.27
LTBP4-209ENST00000594116 SPG7Q9UQ90 795 aa23■■□□□ 1.27
LTBP4-209ENST00000594116 MPRIPQ6WCQ1 1025 aa22.99■■□□□ 1.27
LTBP4-209ENST00000594116 POLD1P28340 1107 aa22.98■■□□□ 1.27
LTBP4-209ENST00000594116 DIEXFQ68CQ4 756 aaKnown RBP22.98■■□□□ 1.27
LTBP4-209ENST00000594116 EIF4A2Q14240 407 aaKnown RBP22.97■■□□□ 1.27
LTBP4-209ENST00000594116 MORC1Q86VD1 984 aa22.97■■□□□ 1.27
LTBP4-209ENST00000594116 TNNT2P45379 298 aaPredicted RBP22.96■■□□□ 1.27
LTBP4-209ENST00000594116 SMARCC1Q92922 1105 aaPredicted RBP22.96■■□□□ 1.27
LTBP4-209ENST00000594116 C4BP0C0L5 1744 aa22.95■■□□□ 1.26
LTBP4-209ENST00000594116 CHD4Q14839 1912 aa22.95■■□□□ 1.26
LTBP4-209ENST00000594116 PRKRIP1Q9H875 184 aaPredicted RBP22.95■■□□□ 1.26
LTBP4-209ENST00000594116 IGSF1Q8N6C5 1336 aa22.94■■□□□ 1.26
LTBP4-209ENST00000594116 RALBP1Q15311 655 aa22.94■■□□□ 1.26
LTBP4-209ENST00000594116 COL23A1Q86Y22 540 aaPredicted RBP22.93■■□□□ 1.26
LTBP4-209ENST00000594116 PIGBQ92521 554 aa22.93■■□□□ 1.26
LTBP4-209ENST00000594116 PHKG2P15735 406 aa22.92■■□□□ 1.26
LTBP4-209ENST00000594116 CNGB1Q14028 1251 aaPredicted RBP22.92■■□□□ 1.26
LTBP4-209ENST00000594116 IFNL2Q8IZJ0 200 aa22.92■■□□□ 1.26
LTBP4-209ENST00000594116 ANP32CO43423 234 aa22.91■■□□□ 1.26
LTBP4-209ENST00000594116 UBR3Q6ZT12 1888 aa22.91■■□□□ 1.26
LTBP4-209ENST00000594116 MSH5O43196 834 aa22.9■■□□□ 1.26
LTBP4-209ENST00000594116 FLAD1Q8NFF5 587 aa22.9■■□□□ 1.26
LTBP4-209ENST00000594116 TMOD3Q9NYL9 352 aa22.89■■□□□ 1.25
LTBP4-209ENST00000594116 GOLGB1Q14789 3259 aaKnown RBP22.89■■□□□ 1.25
LTBP4-209ENST00000594116 MYBBP1AQ9BQG0 1328 aaKnown RBP22.87■■□□□ 1.25
LTBP4-209ENST00000594116 PPP2R1AP30153 589 aa22.87■■□□□ 1.25
LTBP4-209ENST00000594116 KLHL34Q8N239 644 aa22.87■■□□□ 1.25
LTBP4-209ENST00000594116 AK7Q96M32 723 aa22.86■■□□□ 1.25
LTBP4-209ENST00000594116 ZNF831Q5JPB2 1677 aa22.85■■□□□ 1.25
LTBP4-209ENST00000594116 LOC102724428A0A0B4J2F2 783 aa22.85■■□□□ 1.25
LTBP4-209ENST00000594116 SIK1P57059 783 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms