RNA–Protein interactions for RNA: ENST00000593818.5

IRF3-206, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 924 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-206ENST00000593818 TFCP2L1Q9NZI6 479 aa17.58■□□□□ 0.4
IRF3-206ENST00000593818 TAF1LQ8IZX4 1826 aa17.57■□□□□ 0.4
IRF3-206ENST00000593818 CD163L1Q9NR16 1453 aa17.56■□□□□ 0.4
IRF3-206ENST00000593818 GPBP1L1Q9HC44 474 aaPredicted RBP17.56■□□□□ 0.4
IRF3-206ENST00000593818 ANKRD24Q8TF21 1146 aa17.55■□□□□ 0.4
IRF3-206ENST00000593818 CICQ96RK0 1608 aaPredicted RBP17.54■□□□□ 0.4
IRF3-206ENST00000593818 SBNO2Q9Y2G9 1366 aa17.54■□□□□ 0.4
IRF3-206ENST00000593818 KCNQ4P56696 695 aa17.53■□□□□ 0.4
IRF3-206ENST00000593818 CD2APQ9Y5K6 639 aa17.53■□□□□ 0.4
IRF3-206ENST00000593818 RGPD2P0DJD1 1756 aa17.52■□□□□ 0.4
IRF3-206ENST00000593818 TOGARAM1Q9Y4F4 1720 aa17.52■□□□□ 0.39
IRF3-206ENST00000593818 COL23A1Q86Y22 540 aaPredicted RBP17.51■□□□□ 0.39
IRF3-206ENST00000593818 ROCK2O75116 1388 aaKnown RBP17.51■□□□□ 0.39
IRF3-206ENST00000593818 PRIM1P49642 420 aaKnown RBP17.49■□□□□ 0.39
IRF3-206ENST00000593818 NME9Q86XW9 330 aa17.49■□□□□ 0.39
IRF3-206ENST00000593818 CCNL1Q9UK58 526 aaPredicted RBP17.49■□□□□ 0.39
IRF3-206ENST00000593818 UBR3Q6ZT12 1888 aa17.48■□□□□ 0.39
IRF3-206ENST00000593818 DDX54Q8TDD1 881 aaKnown RBP17.48■□□□□ 0.39
IRF3-206ENST00000593818 EDC4Q6P2E9 1401 aaKnown RBP17.47■□□□□ 0.39
IRF3-206ENST00000593818 MEGF6O75095 1541 aa17.47■□□□□ 0.39
IRF3-206ENST00000593818 KIF3CO14782 793 aa17.47■□□□□ 0.39
IRF3-206ENST00000593818 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.47■□□□□ 0.39
IRF3-206ENST00000593818 MSL1Q68DK7 614 aa17.46■□□□□ 0.39
IRF3-206ENST00000593818 SYTL4Q96C24 671 aaPredicted RBP17.46■□□□□ 0.39
IRF3-206ENST00000593818 C4BP0C0L5 1744 aa17.46■□□□□ 0.39
IRF3-206ENST00000593818 USP47Q96K76 1375 aa17.45■□□□□ 0.38
IRF3-206ENST00000593818 ZNF526Q8TF50 670 aaPredicted RBP17.45■□□□□ 0.38
IRF3-206ENST00000593818 IP6K1Q92551 441 aa17.45■□□□□ 0.38
IRF3-206ENST00000593818 KIF13BQ9NQT8 1826 aa17.44■□□□□ 0.38
IRF3-206ENST00000593818 WDR90Q96KV7 1748 aa17.44■□□□□ 0.38
IRF3-206ENST00000593818 KIAA1551Q9HCM1 1747 aa17.44■□□□□ 0.38
IRF3-206ENST00000593818 APLP1P51693 650 aa17.43■□□□□ 0.38
IRF3-206ENST00000593818 CARD11Q9BXL7 1154 aa17.43■□□□□ 0.38
IRF3-206ENST00000593818 ITGB4P16144 1822 aa17.42■□□□□ 0.38
IRF3-206ENST00000593818 MSH5O43196 834 aa17.42■□□□□ 0.38
IRF3-206ENST00000593818 DNAJC5GQ8N7S2 189 aa17.42■□□□□ 0.38
IRF3-206ENST00000593818 FLAD1Q8NFF5 587 aa17.42■□□□□ 0.38
IRF3-206ENST00000593818 IGSF1Q8N6C5 1336 aa17.42■□□□□ 0.38
IRF3-206ENST00000593818 MAP2P11137 1827 aaKnown RBP17.41■□□□□ 0.38
IRF3-206ENST00000593818 ZCRB1Q8TBF4 217 aaKnown RBP17.4■□□□□ 0.38
IRF3-206ENST00000593818 A0A1W2PP64 1363 aa17.4■□□□□ 0.38
IRF3-206ENST00000593818 HMGB2P26583 209 aaKnown RBP17.39■□□□□ 0.37
IRF3-206ENST00000593818 CGNL1Q0VF96 1302 aa17.38■□□□□ 0.37
IRF3-206ENST00000593818 PALLDQ8WX93 1383 aa17.38■□□□□ 0.37
IRF3-206ENST00000593818 NSD3Q9BZ95 1437 aa17.38■□□□□ 0.37
IRF3-206ENST00000593818 BRCA1P38398 1863 aaKnown RBP17.37■□□□□ 0.37
IRF3-206ENST00000593818 HDGFL2Q7Z4V5 671 aaPredicted RBP17.37■□□□□ 0.37
IRF3-206ENST00000593818 MAP3K19Q56UN5 1328 aa17.37■□□□□ 0.37
IRF3-206ENST00000593818 RTL1A6NKG5 1358 aa17.37■□□□□ 0.37
IRF3-206ENST00000593818 PCNTO95613 3336 aa17.36■□□□□ 0.37
IRF3-206ENST00000593818 PKD1L3Q7Z443 1732 aa17.36■□□□□ 0.37
IRF3-206ENST00000593818 HOXC9P31274 260 aa17.36■□□□□ 0.37
IRF3-206ENST00000593818 ZEB1P37275 1124 aaPredicted RBP17.36■□□□□ 0.37
IRF3-206ENST00000593818 LTV1Q96GA3 475 aaPredicted RBP17.36■□□□□ 0.37
IRF3-206ENST00000593818 TOMM70O94826 608 aa17.35■□□□□ 0.37
IRF3-206ENST00000593818 AMIGO3Q86WK7 504 aa17.35■□□□□ 0.37
IRF3-206ENST00000593818 N4BP2Q86UW6 1770 aaPredicted RBP17.34■□□□□ 0.37
IRF3-206ENST00000593818 SLC12A5Q9H2X9 1139 aa17.34■□□□□ 0.37
IRF3-206ENST00000593818 PXDNLA1KZ92 1463 aa17.33■□□□□ 0.37
IRF3-206ENST00000593818 TERF2IPQ9NYB0 399 aa17.33■□□□□ 0.36
IRF3-206ENST00000593818 ARFGEF1Q9Y6D6 1849 aa17.32■□□□□ 0.36
IRF3-206ENST00000593818 JMYQ8N9B5 988 aa17.31■□□□□ 0.36
IRF3-206ENST00000593818 TMC1Q8TDI8 760 aa17.31■□□□□ 0.36
IRF3-206ENST00000593818 PUS7Q96PZ0 661 aaKnown RBP17.31■□□□□ 0.36
IRF3-206ENST00000593818 PCDH11XQ9BZA7 1347 aa17.3■□□□□ 0.36
IRF3-206ENST00000593818 PCDH11YQ9BZA8 1340 aa17.3■□□□□ 0.36
IRF3-206ENST00000593818 ST20-MTHFSA0A0A6YYL1 179 aa17.3■□□□□ 0.36
IRF3-206ENST00000593818 SSFA2P28290 1259 aa17.3■□□□□ 0.36
IRF3-206ENST00000593818 NBPF6Q5VWK0 638 aa17.3■□□□□ 0.36
IRF3-206ENST00000593818 AK7Q96M32 723 aa17.3■□□□□ 0.36
IRF3-206ENST00000593818 NBPF4Q96M43 638 aa17.3■□□□□ 0.36
IRF3-206ENST00000593818 WWC3Q9ULE0 1092 aa17.3■□□□□ 0.36
IRF3-206ENST00000593818 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.29■□□□□ 0.36
IRF3-206ENST00000593818 HSPA5P11021 654 aaKnown RBP17.28■□□□□ 0.36
IRF3-206ENST00000593818 AMPHP49418 695 aa17.28■□□□□ 0.36
IRF3-206ENST00000593818 COL13A1Q5TAT6 717 aaPredicted RBP17.28■□□□□ 0.36
IRF3-206ENST00000593818 SMARCC1Q92922 1105 aaPredicted RBP17.28■□□□□ 0.36
IRF3-206ENST00000593818 KLRG1Q96E93 195 aa17.28■□□□□ 0.36
IRF3-206ENST00000593818 C10orf71Q711Q0 1435 aa17.28■□□□□ 0.36
IRF3-206ENST00000593818 TNRC6CQ9HCJ0 1690 aaKnown RBP17.27■□□□□ 0.36
IRF3-206ENST00000593818 EIF4G2P78344 907 aaKnown RBP eCLIP17.27■□□□□ 0.36
IRF3-206ENST00000593818 RBM46Q8TBY0 533 aaKnown RBP17.27■□□□□ 0.36
IRF3-206ENST00000593818 RAPGEF4Q8WZA2 1011 aa17.27■□□□□ 0.36
IRF3-206ENST00000593818 COG3Q96JB2 828 aa17.27■□□□□ 0.36
IRF3-206ENST00000593818 SMG6Q86US8 1419 aaKnown RBP17.27■□□□□ 0.35
IRF3-206ENST00000593818 ZNF831Q5JPB2 1677 aa17.26■□□□□ 0.35
IRF3-206ENST00000593818 TESK2Q96S53 571 aa17.26■□□□□ 0.35
IRF3-206ENST00000593818 NMRK2Q9NPI5 230 aa17.26■□□□□ 0.35
IRF3-206ENST00000593818 NCAPD2Q15021 1401 aa17.26■□□□□ 0.35
IRF3-206ENST00000593818 C4AP0C0L4 1744 aa17.25■□□□□ 0.35
IRF3-206ENST00000593818 CYP27B1O15528 508 aa17.25■□□□□ 0.35
IRF3-206ENST00000593818 PHF14O94880 888 aa17.25■□□□□ 0.35
IRF3-206ENST00000593818 TATP17735 454 aaPredicted RBP17.25■□□□□ 0.35
IRF3-206ENST00000593818 FBLN1P23142 703 aa17.25■□□□□ 0.35
IRF3-206ENST00000593818 MPRIPQ6WCQ1 1025 aa17.25■□□□□ 0.35
IRF3-206ENST00000593818 USHBP1Q8N6Y0 703 aa17.25■□□□□ 0.35
IRF3-206ENST00000593818 PLEKHG2Q9H7P9 1386 aa17.25■□□□□ 0.35
IRF3-206ENST00000593818 KIF20BQ96Q89 1820 aa17.24■□□□□ 0.35
IRF3-206ENST00000593818 SMIM5Q71RC9 77 aa17.24■□□□□ 0.35
IRF3-206ENST00000593818 INSRP06213 1382 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms