RNA–Protein interactions for RNA: ENST00000593132.1

SEC11C-208, Transcript of SEC11 homolog C, signal peptidase complex subunit, humanhuman

TSL 3

Gene SEC11C, Length 586 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11C-208ENST00000593132 PCDH11YQ9BZA8 1340 aa17.11■□□□□ 0.33
SEC11C-208ENST00000593132 USHBP1Q8N6Y0 703 aa17.1■□□□□ 0.33
SEC11C-208ENST00000593132 DDX54Q8TDD1 881 aaKnown RBP17.1■□□□□ 0.33
SEC11C-208ENST00000593132 PLEKHO1Q53GL0 409 aaPredicted RBP17.09■□□□□ 0.33
SEC11C-208ENST00000593132 BCL11BQ9C0K0 894 aaPredicted RBP17.09■□□□□ 0.33
SEC11C-208ENST00000593132 LRRC37A3O60309 1634 aa17.09■□□□□ 0.33
SEC11C-208ENST00000593132 WNK3Q9BYP7 1800 aa17.08■□□□□ 0.33
SEC11C-208ENST00000593132 HMGB2P26583 209 aaKnown RBP17.08■□□□□ 0.32
SEC11C-208ENST00000593132 FAM182BQ5T319 152 aa17.08■□□□□ 0.32
SEC11C-208ENST00000593132 KDRP35968 1356 aa17.07■□□□□ 0.32
SEC11C-208ENST00000593132 TRIM37O94972 964 aa17.07■□□□□ 0.32
SEC11C-208ENST00000593132 HSP90AB1P08238 724 aaKnown RBP17.07■□□□□ 0.32
SEC11C-208ENST00000593132 SULT6B1Q6IMI4 303 aa17.07■□□□□ 0.32
SEC11C-208ENST00000593132 MEGF6O75095 1541 aa17.06■□□□□ 0.32
SEC11C-208ENST00000593132 IFNL2Q8IZJ0 200 aa17.06■□□□□ 0.32
SEC11C-208ENST00000593132 PNNQ9H307 717 aaKnown RBP17.06■□□□□ 0.32
SEC11C-208ENST00000593132 MYBBP1AQ9BQG0 1328 aaKnown RBP17.05■□□□□ 0.32
SEC11C-208ENST00000593132 APBA3O96018 575 aa17.05■□□□□ 0.32
SEC11C-208ENST00000593132 U2SURPO15042 1029 aaKnown RBP17.04■□□□□ 0.32
SEC11C-208ENST00000593132 PLSCR1O15162 318 aa17.04■□□□□ 0.32
SEC11C-208ENST00000593132 NKX1-1Q15270 411 aaPredicted RBP17.04■□□□□ 0.32
SEC11C-208ENST00000593132 EP400Q96L91 3159 aa17.03■□□□□ 0.32
SEC11C-208ENST00000593132 PRKRIP1Q9H875 184 aaPredicted RBP17.03■□□□□ 0.32
SEC11C-208ENST00000593132 RGPD1P0DJD0 1748 aa17.02■□□□□ 0.32
SEC11C-208ENST00000593132 FCHSD2O94868 740 aa17.02■□□□□ 0.32
SEC11C-208ENST00000593132 NEFMP07197 916 aa17.02■□□□□ 0.32
SEC11C-208ENST00000593132 C1orf141Q5JVX7 400 aa17.02■□□□□ 0.32
SEC11C-208ENST00000593132 RGPD2P0DJD1 1756 aa17.02■□□□□ 0.31
SEC11C-208ENST00000593132 COL3A1P02461 1466 aaPredicted RBP17■□□□□ 0.31
SEC11C-208ENST00000593132 CYP27B1O15528 508 aa17■□□□□ 0.31
SEC11C-208ENST00000593132 ANP32CO43423 234 aa17■□□□□ 0.31
SEC11C-208ENST00000593132 U2AF1L5P0DN76 240 aaPredicted RBP17■□□□□ 0.31
SEC11C-208ENST00000593132 PHKG2P15735 406 aa17■□□□□ 0.31
SEC11C-208ENST00000593132 U2AF1Q01081 240 aaKnown RBP eCLIP17■□□□□ 0.31
SEC11C-208ENST00000593132 DCAF5Q96JK2 942 aa17■□□□□ 0.31
SEC11C-208ENST00000593132 AEBP1Q8IUX7 1158 aa16.99■□□□□ 0.31
SEC11C-208ENST00000593132 HMOX1P09601 288 aa16.98■□□□□ 0.31
SEC11C-208ENST00000593132 PRIM1P49642 420 aaKnown RBP16.98■□□□□ 0.31
SEC11C-208ENST00000593132 AKAP4Q5JQC9 854 aa16.98■□□□□ 0.31
SEC11C-208ENST00000593132 ZNF530Q6P9A1 599 aaPredicted RBP16.98■□□□□ 0.31
SEC11C-208ENST00000593132 GAS2L2Q8NHY3 880 aa16.98■□□□□ 0.31
SEC11C-208ENST00000593132 ERVV-2B6SEH9 535 aa16.97■□□□□ 0.31
SEC11C-208ENST00000593132 EN1Q05925 392 aaPredicted RBP16.97■□□□□ 0.31
SEC11C-208ENST00000593132 SYTL4Q96C24 671 aaPredicted RBP16.97■□□□□ 0.31
SEC11C-208ENST00000593132 ACSBG1Q96GR2 724 aa16.97■□□□□ 0.31
SEC11C-208ENST00000593132 CAMKK2Q96RR4 588 aa16.97■□□□□ 0.31
SEC11C-208ENST00000593132 PKD1L3Q7Z443 1732 aa16.96■□□□□ 0.31
SEC11C-208ENST00000593132 DEFB132Q7Z7B7 95 aa16.96■□□□□ 0.31
SEC11C-208ENST00000593132 KCNQ2O43526 872 aa16.95■□□□□ 0.3
SEC11C-208ENST00000593132 NBPF14Q5TI25 921 aa16.95■□□□□ 0.3
SEC11C-208ENST00000593132 SMARCC1Q92922 1105 aaPredicted RBP16.95■□□□□ 0.3
SEC11C-208ENST00000593132 RSPH6AQ9H0K4 717 aa16.94■□□□□ 0.3
SEC11C-208ENST00000593132 PRKAR2BP31323 418 aa16.93■□□□□ 0.3
SEC11C-208ENST00000593132 WDR43Q15061 677 aaKnown RBP eCLIP16.93■□□□□ 0.3
SEC11C-208ENST00000593132 SLC27A3Q5K4L6 730 aa16.93■□□□□ 0.3
SEC11C-208ENST00000593132 TMOD3Q9NYL9 352 aa16.93■□□□□ 0.3
SEC11C-208ENST00000593132 NHSQ6T4R5 1651 aa16.92■□□□□ 0.3
SEC11C-208ENST00000593132 EZH2Q15910 746 aaKnown RBP16.92■□□□□ 0.3
SEC11C-208ENST00000593132 MPRIPQ6WCQ1 1025 aa16.92■□□□□ 0.3
SEC11C-208ENST00000593132 SBF2Q86WG5 1849 aa16.91■□□□□ 0.3
SEC11C-208ENST00000593132 TNS1Q9HBL0 1735 aaKnown RBP16.91■□□□□ 0.3
SEC11C-208ENST00000593132 HTATSF1O43719 755 aaKnown RBP16.91■□□□□ 0.3
SEC11C-208ENST00000593132 CABP4P57796 275 aa16.91■□□□□ 0.3
SEC11C-208ENST00000593132 MTHFSDQ2M296 383 aaKnown RBP16.91■□□□□ 0.3
SEC11C-208ENST00000593132 GNAT3A8MTJ3 354 aa16.9■□□□□ 0.3
SEC11C-208ENST00000593132 TXNRD1Q16881 649 aa16.9■□□□□ 0.3
SEC11C-208ENST00000593132 SHANK3Q9BYB0 1731 aa16.9■□□□□ 0.3
SEC11C-208ENST00000593132 RGPD3A6NKT7 1758 aaPredicted RBP16.89■□□□□ 0.3
SEC11C-208ENST00000593132 RGPD4Q7Z3J3 1758 aa16.89■□□□□ 0.3
SEC11C-208ENST00000593132 RTF1Q92541 710 aaKnown RBP16.89■□□□□ 0.29
SEC11C-208ENST00000593132 MAPK8IP3Q9UPT6 1336 aa16.89■□□□□ 0.29
SEC11C-208ENST00000593132 PTF1AQ7RTS3 328 aa16.88■□□□□ 0.29
SEC11C-208ENST00000593132 PIGBQ92521 554 aa16.88■□□□□ 0.29
SEC11C-208ENST00000593132 MAP3K5Q99683 1374 aa16.87■□□□□ 0.29
SEC11C-208ENST00000593132 RNMTO43148 476 aaKnown RBP16.86■□□□□ 0.29
SEC11C-208ENST00000593132 PHACTR3Q96KR7 559 aa16.86■□□□□ 0.29
SEC11C-208ENST00000593132 PROM2Q8N271 834 aa16.85■□□□□ 0.29
SEC11C-208ENST00000593132 PLEKHF1Q96S99 279 aa16.85■□□□□ 0.29
SEC11C-208ENST00000593132 SLC52A2Q9HAB3 445 aa16.85■□□□□ 0.29
SEC11C-208ENST00000593132 KAT6BQ8WYB5 2073 aa16.84■□□□□ 0.29
SEC11C-208ENST00000593132 TEFQ10587 303 aa16.84■□□□□ 0.29
SEC11C-208ENST00000593132 NFATC2IPQ8NCF5 419 aa16.84■□□□□ 0.29
SEC11C-208ENST00000593132 STK32BQ9NY57 414 aa16.84■□□□□ 0.29
SEC11C-208ENST00000593132 CCNL1Q9UK58 526 aaPredicted RBP16.84■□□□□ 0.29
SEC11C-208ENST00000593132 DOT1LQ8TEK3 1739 aa16.84■□□□□ 0.29
SEC11C-208ENST00000593132 LMOD3Q0VAK6 560 aa16.83■□□□□ 0.28
SEC11C-208ENST00000593132 PALLDQ8WX93 1383 aa16.83■□□□□ 0.28
SEC11C-208ENST00000593132 RUNDC1Q96C34 613 aa16.83■□□□□ 0.28
SEC11C-208ENST00000593132 BTAF1O14981 1849 aa16.82■□□□□ 0.28
SEC11C-208ENST00000593132 KDM6AO15550 1401 aaPredicted RBP16.82■□□□□ 0.28
SEC11C-208ENST00000593132 NFE2L2Q16236 605 aa16.82■□□□□ 0.28
SEC11C-208ENST00000593132 LGR6Q9HBX8 967 aa16.82■□□□□ 0.28
SEC11C-208ENST00000593132 ATG3Q9NT62 314 aa16.81■□□□□ 0.28
SEC11C-208ENST00000593132 ADAMTS8Q9UP79 889 aa16.81■□□□□ 0.28
SEC11C-208ENST00000593132 LOC102724428A0A0B4J2F2 783 aa16.8■□□□□ 0.28
SEC11C-208ENST00000593132 SIK1P57059 783 aa16.8■□□□□ 0.28
SEC11C-208ENST00000593132 IL17REQ8NFR9 667 aa16.8■□□□□ 0.28
SEC11C-208ENST00000593132 MRS2Q9HD23 443 aa16.8■□□□□ 0.28
SEC11C-208ENST00000593132 ASAP1Q9ULH1 1129 aa16.8■□□□□ 0.28
SEC11C-208ENST00000593132 CEMIPQ8WUJ3 1361 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms