RNA–Protein interactions for RNA: ENST00000592674.1

RPRD1A-211, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 4

Gene RPRD1A, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-211ENST00000592674 RGS12O14924 1447 aa20.61■□□□□ 0.89
RPRD1A-211ENST00000592674 WNK3Q9BYP7 1800 aa20.6■□□□□ 0.89
RPRD1A-211ENST00000592674 FCHSD2O94868 740 aa20.6■□□□□ 0.89
RPRD1A-211ENST00000592674 DDB1Q16531 1140 aa20.6■□□□□ 0.89
RPRD1A-211ENST00000592674 RSPH6AQ9H0K4 717 aa20.6■□□□□ 0.89
RPRD1A-211ENST00000592674 PRKAR2BP31323 418 aa20.59■□□□□ 0.89
RPRD1A-211ENST00000592674 ADAMTS8Q9UP79 889 aa20.59■□□□□ 0.89
RPRD1A-211ENST00000592674 PARP4Q9UKK3 1724 aaKnown RBP20.58■□□□□ 0.89
RPRD1A-211ENST00000592674 EXOC5O00471 708 aa20.58■□□□□ 0.89
RPRD1A-211ENST00000592674 PNISRQ8TF01 805 aaKnown RBP20.58■□□□□ 0.89
RPRD1A-211ENST00000592674 TNS2Q63HR2 1409 aa20.57■□□□□ 0.88
RPRD1A-211ENST00000592674 ZCRB1Q8TBF4 217 aaKnown RBP20.57■□□□□ 0.88
RPRD1A-211ENST00000592674 PLEKHG2Q9H7P9 1386 aa20.57■□□□□ 0.88
RPRD1A-211ENST00000592674 LRRC37A3O60309 1634 aa20.56■□□□□ 0.88
RPRD1A-211ENST00000592674 PLEKHO1Q53GL0 409 aaPredicted RBP20.56■□□□□ 0.88
RPRD1A-211ENST00000592674 PNNQ9H307 717 aaKnown RBP20.56■□□□□ 0.88
RPRD1A-211ENST00000592674 SPG7Q9UQ90 795 aa20.56■□□□□ 0.88
RPRD1A-211ENST00000592674 PDE3BQ13370 1112 aa20.55■□□□□ 0.88
RPRD1A-211ENST00000592674 AMOTQ4VCS5 1084 aa20.54■□□□□ 0.88
RPRD1A-211ENST00000592674 FAM9BQ8IZU0 186 aa20.54■□□□□ 0.88
RPRD1A-211ENST00000592674 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.54■□□□□ 0.882e-7■□□□□ 8.6
RPRD1A-211ENST00000592674 NEFMP07197 916 aa20.53■□□□□ 0.88
RPRD1A-211ENST00000592674 KRT27Q7Z3Y8 459 aa20.53■□□□□ 0.88
RPRD1A-211ENST00000592674 CCDC146Q8IYE0 955 aa20.53■□□□□ 0.88
RPRD1A-211ENST00000592674 DDX54Q8TDD1 881 aaKnown RBP20.53■□□□□ 0.88
RPRD1A-211ENST00000592674 PHACTR3Q96KR7 559 aa20.53■□□□□ 0.88
RPRD1A-211ENST00000592674 PLEKHF1Q96S99 279 aa20.53■□□□□ 0.88
RPRD1A-211ENST00000592674 PCDH11XQ9BZA7 1347 aa20.53■□□□□ 0.88
RPRD1A-211ENST00000592674 PCDH11YQ9BZA8 1340 aa20.53■□□□□ 0.88
RPRD1A-211ENST00000592674 MAPK8IP3Q9UPT6 1336 aa20.52■□□□□ 0.87
RPRD1A-211ENST00000592674 PKD1L3Q7Z443 1732 aa20.51■□□□□ 0.87
RPRD1A-211ENST00000592674 MTHFSDQ2M296 383 aaKnown RBP20.51■□□□□ 0.87
RPRD1A-211ENST00000592674 ZNF530Q6P9A1 599 aaPredicted RBP20.51■□□□□ 0.87
RPRD1A-211ENST00000592674 MARCH10Q8NA82 808 aaPredicted RBP20.51■□□□□ 0.87
RPRD1A-211ENST00000592674 RUNDC1Q96C34 613 aa20.5■□□□□ 0.87
RPRD1A-211ENST00000592674 CYP27B1O15528 508 aa20.49■□□□□ 0.87
RPRD1A-211ENST00000592674 GAS2L2Q8NHY3 880 aa20.49■□□□□ 0.87
RPRD1A-211ENST00000592674 C1orf141Q5JVX7 400 aa20.48■□□□□ 0.87
RPRD1A-211ENST00000592674 FAM182BQ5T319 152 aa20.48■□□□□ 0.87
RPRD1A-211ENST00000592674 IFNL2Q8IZJ0 200 aa20.48■□□□□ 0.87
RPRD1A-211ENST00000592674 PHKG2P15735 406 aa20.47■□□□□ 0.87
RPRD1A-211ENST00000592674 SHANK3Q9BYB0 1731 aa20.47■□□□□ 0.87
RPRD1A-211ENST00000592674 BRWD3Q6RI45 1802 aa20.46■□□□□ 0.87
RPRD1A-211ENST00000592674 AKAP4Q5JQC9 854 aa20.45■□□□□ 0.86
RPRD1A-211ENST00000592674 NFE2L2Q16236 605 aa20.44■□□□□ 0.86
RPRD1A-211ENST00000592674 HSP90AB1P08238 724 aaKnown RBP20.43■□□□□ 0.86
RPRD1A-211ENST00000592674 MAP3K5Q99683 1374 aa20.43■□□□□ 0.86
RPRD1A-211ENST00000592674 NKX1-1Q15270 411 aaPredicted RBP20.42■□□□□ 0.86
RPRD1A-211ENST00000592674 FAM196AQ6ZSG2 479 aa20.42■□□□□ 0.86
RPRD1A-211ENST00000592674 RRP7AQ9Y3A4 280 aaKnown RBP20.42■□□□□ 0.86
RPRD1A-211ENST00000592674 GNAT3A8MTJ3 354 aa20.41■□□□□ 0.86
RPRD1A-211ENST00000592674 APAF1O14727 1248 aa20.41■□□□□ 0.86
RPRD1A-211ENST00000592674 TMPOP42166 694 aaKnown RBP20.41■□□□□ 0.86
RPRD1A-211ENST00000592674 MPRIPQ6WCQ1 1025 aa20.41■□□□□ 0.86
RPRD1A-211ENST00000592674 BCL9O00512 1426 aa20.4■□□□□ 0.86
RPRD1A-211ENST00000592674 NEUROD2Q15784 382 aa20.4■□□□□ 0.86
RPRD1A-211ENST00000592674 DCAF5Q96JK2 942 aa20.4■□□□□ 0.86
RPRD1A-211ENST00000592674 KDM6AO15550 1401 aaPredicted RBP20.39■□□□□ 0.85
RPRD1A-211ENST00000592674 RIPK4P57078 832 aa20.39■□□□□ 0.85
RPRD1A-211ENST00000592674 ACSBG1Q96GR2 724 aa20.39■□□□□ 0.85
RPRD1A-211ENST00000592674 SENP3-EIF4A1A0A087X0R7 540 aa20.38■□□□□ 0.85
RPRD1A-211ENST00000592674 RTF1Q92541 710 aaKnown RBP20.38■□□□□ 0.85
RPRD1A-211ENST00000592674 RNMTO43148 476 aaKnown RBP20.37■□□□□ 0.85
RPRD1A-211ENST00000592674 LGR6Q9HBX8 967 aa20.37■□□□□ 0.85
RPRD1A-211ENST00000592674 HTATSF1O43719 755 aaKnown RBP20.36■□□□□ 0.85
RPRD1A-211ENST00000592674 SYTL4Q96C24 671 aaPredicted RBP20.36■□□□□ 0.85
RPRD1A-211ENST00000592674 PRIM1P49642 420 aaKnown RBP20.35■□□□□ 0.85
RPRD1A-211ENST00000592674 LMOD3Q0VAK6 560 aa20.35■□□□□ 0.85
RPRD1A-211ENST00000592674 MCM10Q7L590 875 aa20.35■□□□□ 0.85
RPRD1A-211ENST00000592674 IL17REQ8NFR9 667 aa20.35■□□□□ 0.85
RPRD1A-211ENST00000592674 ERVV-2B6SEH9 535 aa20.34■□□□□ 0.85
RPRD1A-211ENST00000592674 KCNQ2O43526 872 aa20.34■□□□□ 0.85
RPRD1A-211ENST00000592674 TRIM37O94972 964 aa20.34■□□□□ 0.85
RPRD1A-211ENST00000592674 DCTN1Q14203 1278 aa20.34■□□□□ 0.85
RPRD1A-211ENST00000592674 DOT1LQ8TEK3 1739 aa20.33■□□□□ 0.85
RPRD1A-211ENST00000592674 CABP4P57796 275 aa20.33■□□□□ 0.85
RPRD1A-211ENST00000592674 TRIM35Q9UPQ4 493 aa20.33■□□□□ 0.85
RPRD1A-211ENST00000592674 TOGARAM1Q9Y4F4 1720 aa20.33■□□□□ 0.84
RPRD1A-211ENST00000592674 BCL11BQ9C0K0 894 aaPredicted RBP20.32■□□□□ 0.84
RPRD1A-211ENST00000592674 TMOD3Q9NYL9 352 aa20.32■□□□□ 0.84
RPRD1A-211ENST00000592674 SALL2Q9Y467 1007 aaPredicted RBP20.32■□□□□ 0.84
RPRD1A-211ENST00000592674 CEMIPQ8WUJ3 1361 aa20.32■□□□□ 0.84
RPRD1A-211ENST00000592674 TEFQ10587 303 aa20.31■□□□□ 0.84
RPRD1A-211ENST00000592674 PTF1AQ7RTS3 328 aa20.31■□□□□ 0.84
RPRD1A-211ENST00000592674 THUMPD2Q9BTF0 503 aaKnown RBP20.31■□□□□ 0.84
RPRD1A-211ENST00000592674 SLC52A2Q9HAB3 445 aa20.31■□□□□ 0.84
RPRD1A-211ENST00000592674 ADAMTS7Q9UKP4 1686 aa20.31■□□□□ 0.84
RPRD1A-211ENST00000592674 NHSQ6T4R5 1651 aa20.3■□□□□ 0.84
RPRD1A-211ENST00000592674 NFATC2IPQ8NCF5 419 aa20.3■□□□□ 0.84
RPRD1A-211ENST00000592674 PIGBQ92521 554 aa20.29■□□□□ 0.84
RPRD1A-211ENST00000592674 MRC1P22897 1456 aa20.29■□□□□ 0.84
RPRD1A-211ENST00000592674 DLG5Q8TDM6 1919 aa20.29■□□□□ 0.84
RPRD1A-211ENST00000592674 SCN11AQ9UI33 1791 aa20.29■□□□□ 0.84
RPRD1A-211ENST00000592674 CCDC27Q2M243 656 aa20.28■□□□□ 0.84
RPRD1A-211ENST00000592674 NCBP3Q53F19 620 aaKnown RBP20.28■□□□□ 0.84
RPRD1A-211ENST00000592674 NGEFQ8N5V2 710 aa20.27■□□□□ 0.84
RPRD1A-211ENST00000592674 SBF2Q86WG5 1849 aa20.26■□□□□ 0.83
RPRD1A-211ENST00000592674 SF3B2Q13435 895 aaKnown RBP20.26■□□□□ 0.83
RPRD1A-211ENST00000592674 WWC1Q8IX03 1113 aa20.26■□□□□ 0.83
RPRD1A-211ENST00000592674 APBA3O96018 575 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms