RNA–Protein interactions for RNA: ENST00000592354.5

CAPNS1-213, Transcript of calpain small subunit 1, humanhuman

TSL 2

Gene CAPNS1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-213ENST00000592354 NBPF6Q5VWK0 638 aa18.78■□□□□ 0.6
CAPNS1-213ENST00000592354 NBPF4Q96M43 638 aa18.78■□□□□ 0.6
CAPNS1-213ENST00000592354 FLT4P35916 1363 aa18.78■□□□□ 0.6
CAPNS1-213ENST00000592354 QSER1Q2KHR3 1735 aa18.77■□□□□ 0.6
CAPNS1-213ENST00000592354 SYTL4Q96C24 671 aaPredicted RBP18.77■□□□□ 0.6
CAPNS1-213ENST00000592354 POLR3GLQ9BT43 218 aa18.77■□□□□ 0.6
CAPNS1-213ENST00000592354 MAP2P11137 1827 aaKnown RBP18.77■□□□□ 0.59
CAPNS1-213ENST00000592354 HSP90AB2PQ58FF8 381 aa18.76■□□□□ 0.59
CAPNS1-213ENST00000592354 ZCRB1Q8TBF4 217 aaKnown RBP18.76■□□□□ 0.59
CAPNS1-213ENST00000592354 ATF5Q9Y2D1 282 aaPredicted RBP18.76■□□□□ 0.59
CAPNS1-213ENST00000592354 PKD1L3Q7Z443 1732 aa18.76■□□□□ 0.59
CAPNS1-213ENST00000592354 TOGARAM1Q9Y4F4 1720 aa18.76■□□□□ 0.59
CAPNS1-213ENST00000592354 NSD2O96028 1365 aa18.76■□□□□ 0.59
CAPNS1-213ENST00000592354 INSRP06213 1382 aa18.76■□□□□ 0.59
CAPNS1-213ENST00000592354 ZNF827Q17R98 1081 aa18.75■□□□□ 0.59
CAPNS1-213ENST00000592354 LRRC4BQ9NT99 713 aa18.75■□□□□ 0.59
CAPNS1-213ENST00000592354 PRIM1P49642 420 aaKnown RBP18.74■□□□□ 0.59
CAPNS1-213ENST00000592354 EMILIN1Q9Y6C2 1016 aa18.74■□□□□ 0.59
CAPNS1-213ENST00000592354 KIF24Q5T7B8 1368 aa18.73■□□□□ 0.59
CAPNS1-213ENST00000592354 RAPGEF4Q8WZA2 1011 aa18.73■□□□□ 0.59
CAPNS1-213ENST00000592354 PTGER2P43116 358 aa18.72■□□□□ 0.59
CAPNS1-213ENST00000592354 KCNQ4P56696 695 aa18.72■□□□□ 0.59
CAPNS1-213ENST00000592354 C5P01031 1676 aa18.72■□□□□ 0.59
CAPNS1-213ENST00000592354 PPM1GO15355 546 aaPredicted RBP18.71■□□□□ 0.59
CAPNS1-213ENST00000592354 CCER1Q8TC90 406 aaPredicted RBP18.71■□□□□ 0.59
CAPNS1-213ENST00000592354 ITGB4P16144 1822 aa18.7■□□□□ 0.58
CAPNS1-213ENST00000592354 MTFR1LQ9H019 292 aa18.7■□□□□ 0.58
CAPNS1-213ENST00000592354 CGNL1Q0VF96 1302 aa18.7■□□□□ 0.58
CAPNS1-213ENST00000592354 TATP17735 454 aaPredicted RBP18.69■□□□□ 0.58
CAPNS1-213ENST00000592354 HSPA5P11021 654 aaKnown RBP18.68■□□□□ 0.58
CAPNS1-213ENST00000592354 SLC27A3Q5K4L6 730 aa18.68■□□□□ 0.58
CAPNS1-213ENST00000592354 PCDH11XQ9BZA7 1347 aa18.68■□□□□ 0.58
CAPNS1-213ENST00000592354 PCDH11YQ9BZA8 1340 aa18.68■□□□□ 0.58
CAPNS1-213ENST00000592354 NCAPD2Q15021 1401 aa18.67■□□□□ 0.58
CAPNS1-213ENST00000592354 EIF4G2P78344 907 aaKnown RBP eCLIP18.67■□□□□ 0.58
CAPNS1-213ENST00000592354 AKT1S1Q96B36 256 aa18.67■□□□□ 0.58
CAPNS1-213ENST00000592354 COL24A1Q17RW2 1714 aa18.66■□□□□ 0.58
CAPNS1-213ENST00000592354 TAF1LQ8IZX4 1826 aa18.66■□□□□ 0.58
CAPNS1-213ENST00000592354 SGIP1Q9BQI5 828 aa18.66■□□□□ 0.58
CAPNS1-213ENST00000592354 TNNT2P45379 298 aaPredicted RBP18.65■□□□□ 0.58
CAPNS1-213ENST00000592354 FHDC1Q9C0D6 1143 aaPredicted RBP18.65■□□□□ 0.58
CAPNS1-213ENST00000592354 CCNL1Q9UK58 526 aaPredicted RBP18.64■□□□□ 0.57
CAPNS1-213ENST00000592354 PNPLA7Q6ZV29 1317 aa18.64■□□□□ 0.57
CAPNS1-213ENST00000592354 DCAF8L1A6NGE4 600 aa18.63■□□□□ 0.57
CAPNS1-213ENST00000592354 YY1P25490 414 aa18.63■□□□□ 0.57
CAPNS1-213ENST00000592354 TFCP2L1Q9NZI6 479 aa18.63■□□□□ 0.57
CAPNS1-213ENST00000592354 CYP27B1O15528 508 aa18.62■□□□□ 0.57
CAPNS1-213ENST00000592354 POLKQ9UBT6 870 aa18.62■□□□□ 0.57
CAPNS1-213ENST00000592354 WASHC2AQ641Q2 1341 aa18.62■□□□□ 0.57
CAPNS1-213ENST00000592354 PALLDQ8WX93 1383 aa18.61■□□□□ 0.57
CAPNS1-213ENST00000592354 ARXQ96QS3 562 aa18.61■□□□□ 0.57
CAPNS1-213ENST00000592354 SYT17Q9BSW7 474 aa18.61■□□□□ 0.57
CAPNS1-213ENST00000592354 MPRIPQ6WCQ1 1025 aa18.6■□□□□ 0.57
CAPNS1-213ENST00000592354 EYA1Q99502 592 aa18.6■□□□□ 0.57
CAPNS1-213ENST00000592354 C4BP0C0L5 1744 aa18.6■□□□□ 0.57
CAPNS1-213ENST00000592354 PANK3Q9H999 370 aa18.59■□□□□ 0.57
CAPNS1-213ENST00000592354 KLHL34Q8N239 644 aa18.58■□□□□ 0.56
CAPNS1-213ENST00000592354 EIF4A2Q14240 407 aaKnown RBP18.57■□□□□ 0.56
CAPNS1-213ENST00000592354 MSH5O43196 834 aa18.56■□□□□ 0.56
CAPNS1-213ENST00000592354 SLC16A10Q8TF71 515 aa18.56■□□□□ 0.56
CAPNS1-213ENST00000592354 SPG7Q9UQ90 795 aa18.56■□□□□ 0.56
CAPNS1-213ENST00000592354 UBR3Q6ZT12 1888 aa18.56■□□□□ 0.56
CAPNS1-213ENST00000592354 MAP3K5Q99683 1374 aa18.55■□□□□ 0.56
CAPNS1-213ENST00000592354 POLD1P28340 1107 aa18.54■□□□□ 0.56
CAPNS1-213ENST00000592354 COL23A1Q86Y22 540 aaPredicted RBP18.54■□□□□ 0.56
CAPNS1-213ENST00000592354 UTRNP46939 3433 aa18.54■□□□□ 0.56
CAPNS1-213ENST00000592354 CHD4Q14839 1912 aa18.53■□□□□ 0.56
CAPNS1-213ENST00000592354 MSL1Q68DK7 614 aa18.53■□□□□ 0.56
CAPNS1-213ENST00000592354 PIGBQ92521 554 aa18.53■□□□□ 0.56
CAPNS1-213ENST00000592354 NKX1-1Q15270 411 aaPredicted RBP18.52■□□□□ 0.56
CAPNS1-213ENST00000592354 IGSF1Q8N6C5 1336 aa18.51■□□□□ 0.55
CAPNS1-213ENST00000592354 PHKG2P15735 406 aa18.51■□□□□ 0.55
CAPNS1-213ENST00000592354 MORC1Q86VD1 984 aa18.5■□□□□ 0.55
CAPNS1-213ENST00000592354 SMARCC1Q92922 1105 aaPredicted RBP18.5■□□□□ 0.55
CAPNS1-213ENST00000592354 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.5■□□□□ 0.55
CAPNS1-213ENST00000592354 TMOD3Q9NYL9 352 aa18.5■□□□□ 0.55
CAPNS1-213ENST00000592354 AMIGO3Q86WK7 504 aa18.49■□□□□ 0.55
CAPNS1-213ENST00000592354 IFNL2Q8IZJ0 200 aa18.49■□□□□ 0.55
CAPNS1-213ENST00000592354 PHF14O94880 888 aa18.48■□□□□ 0.55
CAPNS1-213ENST00000592354 SMIM5Q71RC9 77 aa18.48■□□□□ 0.55
CAPNS1-213ENST00000592354 PELP1Q8IZL8 1130 aaKnown RBP18.48■□□□□ 0.55
CAPNS1-213ENST00000592354 NLGN2Q8NFZ4 835 aa18.48■□□□□ 0.55
CAPNS1-213ENST00000592354 AK7Q96M32 723 aa18.48■□□□□ 0.55
CAPNS1-213ENST00000592354 KIF7Q2M1P5 1343 aa18.48■□□□□ 0.55
CAPNS1-213ENST00000592354 COL5A3P25940 1745 aaPredicted RBP18.47■□□□□ 0.55
CAPNS1-213ENST00000592354 ASAP1Q9ULH1 1129 aa18.47■□□□□ 0.55
CAPNS1-213ENST00000592354 KNSTRNQ9Y448 316 aa18.47■□□□□ 0.55
CAPNS1-213ENST00000592354 PLEKHG2Q9H7P9 1386 aa18.46■□□□□ 0.55
CAPNS1-213ENST00000592354 LOC102724428A0A0B4J2F2 783 aa18.46■□□□□ 0.55
CAPNS1-213ENST00000592354 SIK1P57059 783 aa18.46■□□□□ 0.55
CAPNS1-213ENST00000592354 AEBP1Q8IUX7 1158 aa18.46■□□□□ 0.55
CAPNS1-213ENST00000592354 KDM6AO15550 1401 aaPredicted RBP18.46■□□□□ 0.55
CAPNS1-213ENST00000592354 ZNF831Q5JPB2 1677 aa18.45■□□□□ 0.54
CAPNS1-213ENST00000592354 GPR162Q16538 588 aa18.45■□□□□ 0.54
CAPNS1-213ENST00000592354 LINC00116Q8NCU8 138 aa18.45■□□□□ 0.54
CAPNS1-213ENST00000592354 VIRMAQ69YN4 1812 aaKnown RBP18.44■□□□□ 0.54
CAPNS1-213ENST00000592354 KDRP35968 1356 aa18.43■□□□□ 0.54
CAPNS1-213ENST00000592354 SCN11AQ9UI33 1791 aa18.43■□□□□ 0.54
CAPNS1-213ENST00000592354 ITPK1Q13572 414 aa18.43■□□□□ 0.54
CAPNS1-213ENST00000592354 ZNF530Q6P9A1 599 aaPredicted RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms