RNA–Protein interactions for RNA: ENST00000592266.1

RANBP3-227, Transcript of RAN binding protein 3, humanhuman

TSL 4

Gene RANBP3, Length 589 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-227ENST00000592266 ZBTB7AO95365 584 aa23.85■■□□□ 1.41
RANBP3-227ENST00000592266 TATP17735 454 aaPredicted RBP23.85■■□□□ 1.41
RANBP3-227ENST00000592266 SLC27A3Q5K4L6 730 aa23.85■■□□□ 1.41
RANBP3-227ENST00000592266 CCER1Q8TC90 406 aaPredicted RBP23.85■■□□□ 1.41
RANBP3-227ENST00000592266 RGPD2P0DJD1 1756 aa23.84■■□□□ 1.41
RANBP3-227ENST00000592266 DCAF8L1A6NGE4 600 aa23.84■■□□□ 1.41
RANBP3-227ENST00000592266 EIF4G2P78344 907 aaKnown RBP eCLIP23.84■■□□□ 1.41
RANBP3-227ENST00000592266 USHBP1Q8N6Y0 703 aa23.83■■□□□ 1.41
RANBP3-227ENST00000592266 POLR3GLQ9BT43 218 aa23.83■■□□□ 1.41
RANBP3-227ENST00000592266 PDGFDQ9GZP0 370 aaPredicted RBP23.83■■□□□ 1.41
RANBP3-227ENST00000592266 MTFR1LQ9H019 292 aa23.83■■□□□ 1.41
RANBP3-227ENST00000592266 PAPPAQ13219 1627 aa23.82■■□□□ 1.4
RANBP3-227ENST00000592266 PRIM1P49642 420 aaKnown RBP23.82■■□□□ 1.4
RANBP3-227ENST00000592266 EMILIN1Q9Y6C2 1016 aa23.81■■□□□ 1.4
RANBP3-227ENST00000592266 LRRC4BQ9NT99 713 aa23.8■■□□□ 1.4
RANBP3-227ENST00000592266 ATF5Q9Y2D1 282 aaPredicted RBP23.8■■□□□ 1.4
RANBP3-227ENST00000592266 PCDH11XQ9BZA7 1347 aa23.8■■□□□ 1.4
RANBP3-227ENST00000592266 PCDH11YQ9BZA8 1340 aa23.8■■□□□ 1.4
RANBP3-227ENST00000592266 DOT1LQ8TEK3 1739 aa23.79■■□□□ 1.4
RANBP3-227ENST00000592266 SHANK3Q9BYB0 1731 aa23.79■■□□□ 1.4
RANBP3-227ENST00000592266 PPM1GO15355 546 aaPredicted RBP23.78■■□□□ 1.4
RANBP3-227ENST00000592266 PTGER2P43116 358 aa23.78■■□□□ 1.4
RANBP3-227ENST00000592266 HSPA5P11021 654 aaKnown RBP23.77■■□□□ 1.4
RANBP3-227ENST00000592266 NSD2O96028 1365 aa23.77■■□□□ 1.4
RANBP3-227ENST00000592266 ZNF827Q17R98 1081 aa23.76■■□□□ 1.39
RANBP3-227ENST00000592266 WASHC2AQ641Q2 1341 aa23.76■■□□□ 1.39
RANBP3-227ENST00000592266 HMGB2P26583 209 aaKnown RBP23.74■■□□□ 1.39
RANBP3-227ENST00000592266 AKT1S1Q96B36 256 aa23.74■■□□□ 1.39
RANBP3-227ENST00000592266 ANKRD26Q9UPS8 1709 aa23.73■■□□□ 1.39
RANBP3-227ENST00000592266 SLC16A10Q8TF71 515 aa23.73■■□□□ 1.39
RANBP3-227ENST00000592266 CCNL1Q9UK58 526 aaPredicted RBP23.72■■□□□ 1.39
RANBP3-227ENST00000592266 NCAPD2Q15021 1401 aa23.72■■□□□ 1.39
RANBP3-227ENST00000592266 SGIP1Q9BQI5 828 aa23.71■■□□□ 1.39
RANBP3-227ENST00000592266 TFCP2L1Q9NZI6 479 aa23.71■■□□□ 1.39
RANBP3-227ENST00000592266 POLKQ9UBT6 870 aa23.71■■□□□ 1.39
RANBP3-227ENST00000592266 SPG7Q9UQ90 795 aa23.7■■□□□ 1.38
RANBP3-227ENST00000592266 LY75O60449 1722 aa23.7■■□□□ 1.38
RANBP3-227ENST00000592266 CYP27B1O15528 508 aa23.69■■□□□ 1.38
RANBP3-227ENST00000592266 ARXQ96QS3 562 aa23.69■■□□□ 1.38
RANBP3-227ENST00000592266 PANK3Q9H999 370 aa23.69■■□□□ 1.38
RANBP3-227ENST00000592266 QSER1Q2KHR3 1735 aa23.68■■□□□ 1.38
RANBP3-227ENST00000592266 FHDC1Q9C0D6 1143 aaPredicted RBP23.68■■□□□ 1.38
RANBP3-227ENST00000592266 MAP2P11137 1827 aaKnown RBP23.68■■□□□ 1.38
RANBP3-227ENST00000592266 PNPLA7Q6ZV29 1317 aa23.67■■□□□ 1.38
RANBP3-227ENST00000592266 YY1P25490 414 aa23.67■■□□□ 1.38
RANBP3-227ENST00000592266 TNNT2P45379 298 aaPredicted RBP23.67■■□□□ 1.38
RANBP3-227ENST00000592266 KCNQ4P56696 695 aa23.67■■□□□ 1.38
RANBP3-227ENST00000592266 EYA1Q99502 592 aa23.67■■□□□ 1.38
RANBP3-227ENST00000592266 SYT17Q9BSW7 474 aa23.67■■□□□ 1.38
RANBP3-227ENST00000592266 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.67■■□□□ 1.383e-6■□□□□ 10.5
RANBP3-227ENST00000592266 PKD1L3Q7Z443 1732 aa23.67■■□□□ 1.38
RANBP3-227ENST00000592266 POLD1P28340 1107 aa23.66■■□□□ 1.38
RANBP3-227ENST00000592266 MPRIPQ6WCQ1 1025 aa23.66■■□□□ 1.38
RANBP3-227ENST00000592266 SMARCC1Q92922 1105 aaPredicted RBP23.65■■□□□ 1.38
RANBP3-227ENST00000592266 PALLDQ8WX93 1383 aa23.65■■□□□ 1.38
RANBP3-227ENST00000592266 PLEKHG2Q9H7P9 1386 aa23.65■■□□□ 1.38
RANBP3-227ENST00000592266 MAP3K5Q99683 1374 aa23.64■■□□□ 1.37
RANBP3-227ENST00000592266 EIF4A2Q14240 407 aaKnown RBP23.63■■□□□ 1.37
RANBP3-227ENST00000592266 NKX1-1Q15270 411 aaPredicted RBP23.63■■□□□ 1.37
RANBP3-227ENST00000592266 MORC1Q86VD1 984 aa23.6■■□□□ 1.37
RANBP3-227ENST00000592266 IFNL2Q8IZJ0 200 aa23.6■■□□□ 1.37
RANBP3-227ENST00000592266 KNSTRNQ9Y448 316 aa23.6■■□□□ 1.37
RANBP3-227ENST00000592266 MSH5O43196 834 aa23.59■■□□□ 1.37
RANBP3-227ENST00000592266 FLAD1Q8NFF5 587 aa23.58■■□□□ 1.37
RANBP3-227ENST00000592266 TUBGCP6Q96RT7 1819 aa23.58■■□□□ 1.37
RANBP3-227ENST00000592266 TOGARAM1Q9Y4F4 1720 aa23.58■■□□□ 1.37
RANBP3-227ENST00000592266 IGSF1Q8N6C5 1336 aa23.58■■□□□ 1.36
RANBP3-227ENST00000592266 PHKG2P15735 406 aa23.57■■□□□ 1.36
RANBP3-227ENST00000592266 PIGBQ92521 554 aa23.57■■□□□ 1.36
RANBP3-227ENST00000592266 TMOD3Q9NYL9 352 aa23.57■■□□□ 1.36
RANBP3-227ENST00000592266 C5P01031 1676 aa23.56■■□□□ 1.36
RANBP3-227ENST00000592266 ITGB4P16144 1822 aa23.55■■□□□ 1.36
RANBP3-227ENST00000592266 COL23A1Q86Y22 540 aaPredicted RBP23.55■■□□□ 1.36
RANBP3-227ENST00000592266 COL24A1Q17RW2 1714 aa23.54■■□□□ 1.36
RANBP3-227ENST00000592266 KLHL34Q8N239 644 aa23.54■■□□□ 1.36
RANBP3-227ENST00000592266 AK7Q96M32 723 aa23.54■■□□□ 1.36
RANBP3-227ENST00000592266 HSP90AB1P08238 724 aaKnown RBP23.53■■□□□ 1.36
RANBP3-227ENST00000592266 PLEKHO1Q53GL0 409 aaPredicted RBP23.52■■□□□ 1.36
RANBP3-227ENST00000592266 AMOTQ4VCS5 1084 aa23.51■■□□□ 1.35
RANBP3-227ENST00000592266 KIF7Q2M1P5 1343 aa23.51■■□□□ 1.35
RANBP3-227ENST00000592266 LOC102724428A0A0B4J2F2 783 aa23.5■■□□□ 1.35
RANBP3-227ENST00000592266 SIK1P57059 783 aa23.5■■□□□ 1.35
RANBP3-227ENST00000592266 UTRNP46939 3433 aa23.5■■□□□ 1.35
RANBP3-227ENST00000592266 TAF1LQ8IZX4 1826 aa23.49■■□□□ 1.35
RANBP3-227ENST00000592266 C4BP0C0L5 1744 aa23.49■■□□□ 1.35
RANBP3-227ENST00000592266 ERVV-2B6SEH9 535 aa23.48■■□□□ 1.35
RANBP3-227ENST00000592266 GPR162Q16538 588 aa23.48■■□□□ 1.35
RANBP3-227ENST00000592266 DCAF5Q96JK2 942 aa23.48■■□□□ 1.35
RANBP3-227ENST00000592266 AMER1Q5JTC6 1135 aaPredicted RBP23.47■■□□□ 1.35
RANBP3-227ENST00000592266 ASAP1Q9ULH1 1129 aa23.47■■□□□ 1.35
RANBP3-227ENST00000592266 SSFA2P28290 1259 aa23.46■■□□□ 1.35
RANBP3-227ENST00000592266 MSL1Q68DK7 614 aa23.46■■□□□ 1.35
RANBP3-227ENST00000592266 ZNF530Q6P9A1 599 aaPredicted RBP23.46■■□□□ 1.35
RANBP3-227ENST00000592266 ATP6V1AP38606 617 aa23.45■■□□□ 1.34
RANBP3-227ENST00000592266 C1orf141Q5JVX7 400 aa23.44■■□□□ 1.34
RANBP3-227ENST00000592266 ATG3Q9NT62 314 aa23.44■■□□□ 1.34
RANBP3-227ENST00000592266 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.43■■□□□ 1.34
RANBP3-227ENST00000592266 PHF14O94880 888 aa23.43■■□□□ 1.34
RANBP3-227ENST00000592266 SULT6B1Q6IMI4 303 aa23.43■■□□□ 1.34
RANBP3-227ENST00000592266 LINC00116Q8NCU8 138 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms