RNA–Protein interactions for RNA: ENST00000590746.5

RTN2-209, Transcript of reticulon 2, humanhuman

TSL 3

Gene RTN2, Length 228 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN2-209ENST00000590746 FAM208AQ9UK61 1670 aaKnown RBP12.86□□□□□ -0.35
RTN2-209ENST00000590746 U2SURPO15042 1029 aaKnown RBP12.86□□□□□ -0.35
RTN2-209ENST00000590746 APBA3O96018 575 aa12.86□□□□□ -0.35
RTN2-209ENST00000590746 HMOX1P09601 288 aa12.86□□□□□ -0.35
RTN2-209ENST00000590746 PTF1AQ7RTS3 328 aa12.86□□□□□ -0.35
RTN2-209ENST00000590746 SPG7Q9UQ90 795 aa12.86□□□□□ -0.35
RTN2-209ENST00000590746 LRRC37A3O60309 1634 aa12.86□□□□□ -0.35
RTN2-209ENST00000590746 PARD3Q8TEW0 1356 aa12.85□□□□□ -0.35
RTN2-209ENST00000590746 KCNQ2O43526 872 aa12.85□□□□□ -0.35
RTN2-209ENST00000590746 CYP27B1O15528 508 aa12.84□□□□□ -0.35
RTN2-209ENST00000590746 BAG6P46379 1132 aa12.84□□□□□ -0.35
RTN2-209ENST00000590746 EN1Q05925 392 aaPredicted RBP12.84□□□□□ -0.35
RTN2-209ENST00000590746 PLEKHO1Q53GL0 409 aaPredicted RBP12.84□□□□□ -0.35
RTN2-209ENST00000590746 BCL11BQ9C0K0 894 aaPredicted RBP12.84□□□□□ -0.35
RTN2-209ENST00000590746 NCAPD2Q15021 1401 aa12.84□□□□□ -0.35
RTN2-209ENST00000590746 SYTL4Q96C24 671 aaPredicted RBP12.83□□□□□ -0.36
RTN2-209ENST00000590746 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.83□□□□□ -0.36
RTN2-209ENST00000590746 NUDCQ9Y266 331 aa12.83□□□□□ -0.36
RTN2-209ENST00000590746 PCDH11XQ9BZA7 1347 aa12.83□□□□□ -0.36
RTN2-209ENST00000590746 PCDH11YQ9BZA8 1340 aa12.83□□□□□ -0.36
RTN2-209ENST00000590746 WNK3Q9BYP7 1800 aa12.83□□□□□ -0.36
RTN2-209ENST00000590746 PRIM1P49642 420 aaKnown RBP12.82□□□□□ -0.36
RTN2-209ENST00000590746 KAT6BQ8WYB5 2073 aa12.82□□□□□ -0.36
RTN2-209ENST00000590746 BCL9O00512 1426 aa12.81□□□□□ -0.36
RTN2-209ENST00000590746 U2AF1L5P0DN76 240 aaPredicted RBP12.81□□□□□ -0.36
RTN2-209ENST00000590746 U2AF1Q01081 240 aaKnown RBP eCLIP12.81□□□□□ -0.36
RTN2-209ENST00000590746 EZH2Q15910 746 aaKnown RBP12.81□□□□□ -0.36
RTN2-209ENST00000590746 AMOTQ4VCS5 1084 aa12.81□□□□□ -0.36
RTN2-209ENST00000590746 ZNF530Q6P9A1 599 aaPredicted RBP12.81□□□□□ -0.36
RTN2-209ENST00000590746 IFNL2Q8IZJ0 200 aa12.81□□□□□ -0.36
RTN2-209ENST00000590746 PRKRIP1Q9H875 184 aaPredicted RBP12.81□□□□□ -0.36
RTN2-209ENST00000590746 COL3A1P02461 1466 aaPredicted RBP12.8□□□□□ -0.36
RTN2-209ENST00000590746 PHKG2P15735 406 aa12.8□□□□□ -0.36
RTN2-209ENST00000590746 CAMKK2Q96RR4 588 aa12.8□□□□□ -0.36
RTN2-209ENST00000590746 MYBBP1AQ9BQG0 1328 aaKnown RBP12.8□□□□□ -0.36
RTN2-209ENST00000590746 KDRP35968 1356 aa12.8□□□□□ -0.36
RTN2-209ENST00000590746 NKX1-1Q15270 411 aaPredicted RBP12.78□□□□□ -0.36
RTN2-209ENST00000590746 C1orf141Q5JVX7 400 aa12.78□□□□□ -0.36
RTN2-209ENST00000590746 MPRIPQ6WCQ1 1025 aa12.78□□□□□ -0.36
RTN2-209ENST00000590746 PLSCR1O15162 318 aa12.77□□□□□ -0.37
RTN2-209ENST00000590746 PRKAR2BP31323 418 aa12.77□□□□□ -0.37
RTN2-209ENST00000590746 MTHFSDQ2M296 383 aaKnown RBP12.77□□□□□ -0.37
RTN2-209ENST00000590746 HSP90AB1P08238 724 aaKnown RBP12.76□□□□□ -0.37
RTN2-209ENST00000590746 PHACTR3Q96KR7 559 aa12.76□□□□□ -0.37
RTN2-209ENST00000590746 RSPH6AQ9H0K4 717 aa12.76□□□□□ -0.37
RTN2-209ENST00000590746 ANP32CO43423 234 aa12.75□□□□□ -0.37
RTN2-209ENST00000590746 FCHSD2O94868 740 aa12.75□□□□□ -0.37
RTN2-209ENST00000590746 RGPD1P0DJD0 1748 aa12.75□□□□□ -0.37
RTN2-209ENST00000590746 PROM2Q8N271 834 aa12.75□□□□□ -0.37
RTN2-209ENST00000590746 DCAF5Q96JK2 942 aa12.75□□□□□ -0.37
RTN2-209ENST00000590746 PLEKHG2Q9H7P9 1386 aa12.74□□□□□ -0.37
RTN2-209ENST00000590746 TXNRD1Q16881 649 aa12.74□□□□□ -0.37
RTN2-209ENST00000590746 AKAP4Q5JQC9 854 aa12.74□□□□□ -0.37
RTN2-209ENST00000590746 PIGBQ92521 554 aa12.74□□□□□ -0.37
RTN2-209ENST00000590746 TMOD3Q9NYL9 352 aa12.74□□□□□ -0.37
RTN2-209ENST00000590746 SBF2Q86WG5 1849 aa12.74□□□□□ -0.37
RTN2-209ENST00000590746 SHANK3Q9BYB0 1731 aa12.74□□□□□ -0.37
RTN2-209ENST00000590746 LGR6Q9HBX8 967 aa12.73□□□□□ -0.37
RTN2-209ENST00000590746 PKD1L3Q7Z443 1732 aa12.73□□□□□ -0.37
RTN2-209ENST00000590746 TNS1Q9HBL0 1735 aaKnown RBP12.73□□□□□ -0.37
RTN2-209ENST00000590746 ERVV-2B6SEH9 535 aa12.72□□□□□ -0.37
RTN2-209ENST00000590746 CABP4P57796 275 aa12.72□□□□□ -0.37
RTN2-209ENST00000590746 GAS2L2Q8NHY3 880 aa12.72□□□□□ -0.37
RTN2-209ENST00000590746 RNMTO43148 476 aaKnown RBP12.71□□□□□ -0.37
RTN2-209ENST00000590746 NEFMP07197 916 aa12.71□□□□□ -0.37
RTN2-209ENST00000590746 KCNQ4P56696 695 aa12.71□□□□□ -0.37
RTN2-209ENST00000590746 WDR43Q15061 677 aaKnown RBP eCLIP12.71□□□□□ -0.37
RTN2-209ENST00000590746 NBPF14Q5TI25 921 aa12.71□□□□□ -0.37
RTN2-209ENST00000590746 NFATC2IPQ8NCF5 419 aa12.71□□□□□ -0.37
RTN2-209ENST00000590746 PSDA5PKW4 1024 aaPredicted RBP12.7□□□□□ -0.38
RTN2-209ENST00000590746 CCDC184Q52MB2 194 aa12.7□□□□□ -0.38
RTN2-209ENST00000590746 PNNQ9H307 717 aaKnown RBP12.7□□□□□ -0.38
RTN2-209ENST00000590746 ASAP1Q9ULH1 1129 aa12.7□□□□□ -0.38
RTN2-209ENST00000590746 NHSQ6T4R5 1651 aa12.7□□□□□ -0.38
RTN2-209ENST00000590746 KDM6AO15550 1401 aaPredicted RBP12.7□□□□□ -0.38
RTN2-209ENST00000590746 GNAT3A8MTJ3 354 aa12.69□□□□□ -0.38
RTN2-209ENST00000590746 R3HDM1Q15032 1099 aaKnown RBP12.69□□□□□ -0.38
RTN2-209ENST00000590746 SMARCC1Q92922 1105 aaPredicted RBP12.69□□□□□ -0.38
RTN2-209ENST00000590746 PLEKHF1Q96S99 279 aa12.69□□□□□ -0.38
RTN2-209ENST00000590746 ATG3Q9NT62 314 aa12.69□□□□□ -0.38
RTN2-209ENST00000590746 LRRC4BQ9NT99 713 aa12.69□□□□□ -0.38
RTN2-209ENST00000590746 ADAMTS8Q9UP79 889 aa12.69□□□□□ -0.38
RTN2-209ENST00000590746 DOT1LQ8TEK3 1739 aa12.68□□□□□ -0.38
RTN2-209ENST00000590746 CCDC146Q8IYE0 955 aa12.68□□□□□ -0.38
RTN2-209ENST00000590746 IL17REQ8NFR9 667 aa12.68□□□□□ -0.38
RTN2-209ENST00000590746 CCNL1Q9UK58 526 aaPredicted RBP12.68□□□□□ -0.38
RTN2-209ENST00000590746 BTAF1O14981 1849 aa12.67□□□□□ -0.38
RTN2-209ENST00000590746 MAPK8IP3Q9UPT6 1336 aa12.67□□□□□ -0.38
RTN2-209ENST00000590746 SLC27A3Q5K4L6 730 aa12.67□□□□□ -0.38
RTN2-209ENST00000590746 RTF1Q92541 710 aaKnown RBP12.67□□□□□ -0.38
RTN2-209ENST00000590746 SLC52A2Q9HAB3 445 aa12.67□□□□□ -0.38
RTN2-209ENST00000590746 ANO8Q9HCE9 1232 aaPredicted RBP12.67□□□□□ -0.38
RTN2-209ENST00000590746 PALLDQ8WX93 1383 aa12.67□□□□□ -0.38
RTN2-209ENST00000590746 MAP3K5Q99683 1374 aa12.67□□□□□ -0.38
RTN2-209ENST00000590746 DCTN1Q14203 1278 aa12.66□□□□□ -0.38
RTN2-209ENST00000590746 MCM10Q7L590 875 aa12.66□□□□□ -0.38
RTN2-209ENST00000590746 RBM42Q9BTD8 480 aaKnown RBP12.66□□□□□ -0.38
RTN2-209ENST00000590746 MRS2Q9HD23 443 aa12.66□□□□□ -0.38
RTN2-209ENST00000590746 STK32BQ9NY57 414 aa12.66□□□□□ -0.38
RTN2-209ENST00000590746 TOGARAM1Q9Y4F4 1720 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms