RNA–Protein interactions for RNA: ENST00000590638.5

NEDD4L-230, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 2

Gene NEDD4L, Length 862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-230	ENST00000590638	VARS	P26640	1264 aa	Known RBP	12.01	□□□□□ -0.49
NEDD4L-230	ENST00000590638	SRPK2	P78362	688 aa	Known RBP	12.01	□□□□□ -0.49
NEDD4L-230	ENST00000590638	PLA2G2C	Q5R387	149 aa		12.01	□□□□□ -0.49
NEDD4L-230	ENST00000590638	EHBP1	Q8NDI1	1231 aa		12.01	□□□□□ -0.49
NEDD4L-230	ENST00000590638	LARP1	Q6PKG0	1096 aa	Known RBP	12	□□□□□ -0.49
NEDD4L-230	ENST00000590638	PHTF2	Q8N3S3	785 aa		12	□□□□□ -0.49
NEDD4L-230	ENST00000590638	MKRN1	Q9UHC7	482 aa	Known RBP	12	□□□□□ -0.49
NEDD4L-230	ENST00000590638	UST	Q9Y2C2	406 aa		12	□□□□□ -0.49
NEDD4L-230	ENST00000590638	RANGAP1	P46060	587 aa	Predicted RBP	11.99	□□□□□ -0.49
NEDD4L-230	ENST00000590638	KANK4	Q5T7N3	995 aa	Predicted RBP	11.99	□□□□□ -0.49
NEDD4L-230	ENST00000590638	C1QTNF2	Q9BXJ5	285 aa		11.99	□□□□□ -0.49
NEDD4L-230	ENST00000590638	SYNJ2	O15056	1496 aa		11.99	□□□□□ -0.49
NEDD4L-230	ENST00000590638	GRIN2A	Q12879	1464 aa		11.98	□□□□□ -0.49
NEDD4L-230	ENST00000590638	ATP5J2-PTCD1	G3V325	749 aa		11.98	□□□□□ -0.49
NEDD4L-230	ENST00000590638	RAB15	P59190	212 aa		11.98	□□□□□ -0.49
NEDD4L-230	ENST00000590638	OXLD1	Q5BKU9	147 aa		11.98	□□□□□ -0.49
NEDD4L-230	ENST00000590638	AEBP1	Q8IUX7	1158 aa		11.98	□□□□□ -0.49
NEDD4L-230	ENST00000590638	TRMT44	Q8IYL2	757 aa	Known RBP	11.98	□□□□□ -0.49
NEDD4L-230	ENST00000590638	KCTD17	Q8N5Z5	321 aa		11.98	□□□□□ -0.49
NEDD4L-230	ENST00000590638	NOD1	Q9Y239	953 aa		11.98	□□□□□ -0.49
NEDD4L-230	ENST00000590638	RASA1	P20936	1047 aa		11.97	□□□□□ -0.49
NEDD4L-230	ENST00000590638	TRIM26	Q12899	539 aa	Predicted RBP	11.97	□□□□□ -0.49
NEDD4L-230	ENST00000590638	ARID5B	Q14865	1188 aa		11.97	□□□□□ -0.49
NEDD4L-230	ENST00000590638	VASH1	Q7L8A9	365 aa	Predicted RBP	11.97	□□□□□ -0.49
NEDD4L-230	ENST00000590638	TRIM50	Q86XT4	487 aa		11.97	□□□□□ -0.49
NEDD4L-230	ENST00000590638	CHMP7	Q8WUX9	453 aa	Predicted RBP	11.97	□□□□□ -0.49
NEDD4L-230	ENST00000590638	SKOR1	P84550	965 aa		11.96	□□□□□ -0.49
NEDD4L-230	ENST00000590638	KCTD15	Q96SI1	283 aa	Predicted RBP	11.96	□□□□□ -0.49
NEDD4L-230	ENST00000590638	ARHGAP35	Q9NRY4	1499 aa		11.95	□□□□□ -0.5
NEDD4L-230	ENST00000590638	VPS8	Q8N3P4	1428 aa		11.95	□□□□□ -0.5
NEDD4L-230	ENST00000590638	CCDC125	Q86Z20	511 aa		11.95	□□□□□ -0.5
NEDD4L-230	ENST00000590638	SEPT12	Q8IYM1	358 aa		11.95	□□□□□ -0.5
NEDD4L-230	ENST00000590638	SIRT1	Q96EB6	747 aa		11.95	□□□□□ -0.5
NEDD4L-230	ENST00000590638	CCDC85A	Q96PX6	553 aa	Predicted RBP	11.95	□□□□□ -0.5
NEDD4L-230	ENST00000590638	ESF1	Q9H501	851 aa	Known RBP	11.95	□□□□□ -0.5
NEDD4L-230	ENST00000590638	PCDHB11	Q9Y5F2	797 aa		11.95	□□□□□ -0.5
NEDD4L-230	ENST00000590638	EFCAB5	A4FU69	1503 aa		11.95	□□□□□ -0.5
NEDD4L-230	ENST00000590638	IQGAP2	Q13576	1575 aa		11.94	□□□□□ -0.5
NEDD4L-230	ENST00000590638	ATP1A2	P50993	1020 aa		11.94	□□□□□ -0.5
NEDD4L-230	ENST00000590638	RC3H1	Q5TC82	1133 aa	Known RBP	11.94	□□□□□ -0.5
NEDD4L-230	ENST00000590638	PODXL2	Q9NZ53	605 aa		11.94	□□□□□ -0.5
NEDD4L-230	ENST00000590638	NOVA2	Q9UNW9	492 aa	Known RBP	11.94	□□□□□ -0.5
NEDD4L-230	ENST00000590638	RBM19	Q9Y4C8	960 aa	Known RBP	11.94	□□□□□ -0.5
NEDD4L-230	ENST00000590638	ARAP1	Q96P48	1450 aa		11.94	□□□□□ -0.5
NEDD4L-230	ENST00000590638	RIMBP3C	A6NJZ7	1639 aa		11.93	□□□□□ -0.5
NEDD4L-230	ENST00000590638	RIMBP3B	A6NNM3	1639 aa		11.93	□□□□□ -0.5
NEDD4L-230	ENST00000590638	RIMBP3	Q9UFD9	1639 aa		11.93	□□□□□ -0.5
NEDD4L-230	ENST00000590638	KIAA0586	Q9BVV6	1533 aa		11.93	□□□□□ -0.5
NEDD4L-230	ENST00000590638	FAM196B	A6NMK8	535 aa		11.93	□□□□□ -0.5
NEDD4L-230	ENST00000590638	TRAF7	Q6Q0C0	670 aa		11.93	□□□□□ -0.5
NEDD4L-230	ENST00000590638	CHIC2	Q9UKJ5	165 aa		11.93	□□□□□ -0.5
NEDD4L-230	ENST00000590638	USP17L15	C9J2P7	530 aa		11.92	□□□□□ -0.5
NEDD4L-230	ENST00000590638	USP17L10	C9JJH3	530 aa		11.92	□□□□□ -0.5
NEDD4L-230	ENST00000590638	USP17L13	C9JLJ4	530 aa		11.92	□□□□□ -0.5
NEDD4L-230	ENST00000590638	USP17L12	C9JPN9	530 aa		11.92	□□□□□ -0.5
NEDD4L-230	ENST00000590638	USP17L11	C9JVI0	530 aa		11.92	□□□□□ -0.5
NEDD4L-230	ENST00000590638	USP17L21	D6R901	530 aa		11.92	□□□□□ -0.5
NEDD4L-230	ENST00000590638	USP17L18	D6R9N7	530 aa		11.92	□□□□□ -0.5
NEDD4L-230	ENST00000590638	USP17L22	D6RA61	530 aa		11.92	□□□□□ -0.5
NEDD4L-230	ENST00000590638	USP17L17	D6RBQ6	530 aa		11.92	□□□□□ -0.5
NEDD4L-230	ENST00000590638	USP17L19	D6RCP7	530 aa		11.92	□□□□□ -0.5
NEDD4L-230	ENST00000590638	USP17L20	D6RJB6	530 aa		11.92	□□□□□ -0.5
NEDD4L-230	ENST00000590638	USP17L24	Q0WX57	530 aa		11.92	□□□□□ -0.5
NEDD4L-230	ENST00000590638	ELOA	Q14241	798 aa	Known RBP	11.92	□□□□□ -0.5
NEDD4L-230	ENST00000590638	TSGA10IP	Q3SY00	556 aa		11.92	□□□□□ -0.5
NEDD4L-230	ENST00000590638	TRIM52	Q96A61	297 aa		11.92	□□□□□ -0.5
NEDD4L-230	ENST00000590638	ESPN	B1AK53	854 aa		11.91	□□□□□ -0.5
NEDD4L-230	ENST00000590638	MYC	P01106	439 aa	Predicted RBP	11.91	□□□□□ -0.5
NEDD4L-230	ENST00000590638	SLC19A1	P41440	591 aa		11.91	□□□□□ -0.5
NEDD4L-230	ENST00000590638	USP4	Q13107	963 aa		11.91	□□□□□ -0.5
NEDD4L-230	ENST00000590638	LIAT1	Q6ZQX7	453 aa		11.91	□□□□□ -0.5
NEDD4L-230	ENST00000590638	OGFOD1	Q8N543	542 aa		11.91	□□□□□ -0.5
NEDD4L-230	ENST00000590638	MAP4K5	Q9Y4K4	846 aa		11.91	□□□□□ -0.5
NEDD4L-230	ENST00000590638	PSME1	Q06323	249 aa		11.9	□□□□□ -0.5
NEDD4L-230	ENST00000590638	NUP160	Q12769	1436 aa		11.9	□□□□□ -0.5
NEDD4L-230	ENST00000590638	CRTC2	Q53ET0	693 aa	Predicted RBP	11.9	□□□□□ -0.5
NEDD4L-230	ENST00000590638	FAM200A	Q8TCP9	573 aa		11.9	□□□□□ -0.5
NEDD4L-230	ENST00000590638	DNAAF2	Q9NVR5	837 aa	Known RBP	11.9	□□□□□ -0.5
NEDD4L-230	ENST00000590638	SAMD9	Q5K651	1589 aa		11.89	□□□□□ -0.51
NEDD4L-230	ENST00000590638	ZNF594	Q96JF6	807 aa	Predicted RBP	11.89	□□□□□ -0.51
NEDD4L-230	ENST00000590638	CHD1	O14646	1710 aa		11.89	□□□□□ -0.51
NEDD4L-230	ENST00000590638	CEP170	Q5SW79	1584 aa		11.88	□□□□□ -0.51
NEDD4L-230	ENST00000590638	UGGT2	Q9NYU1	1516 aa		11.88	□□□□□ -0.51
NEDD4L-230	ENST00000590638	PATL2	C9JE40	543 aa	Known RBP	11.88	□□□□□ -0.51
NEDD4L-230	ENST00000590638	GTF2I	P78347	998 aa		11.88	□□□□□ -0.51
NEDD4L-230	ENST00000590638	IFFO2	Q5TF58	517 aa		11.88	□□□□□ -0.51
NEDD4L-230	ENST00000590638	ARHGEF11	O15085	1522 aa		11.87	□□□□□ -0.51
NEDD4L-230	ENST00000590638	CARNS1	A5YM72	827 aa		11.87	□□□□□ -0.51
NEDD4L-230	ENST00000590638	FSHR	P23945	695 aa		11.87	□□□□□ -0.51
NEDD4L-230	ENST00000590638	PTK7	Q13308	1070 aa		11.87	□□□□□ -0.51
NEDD4L-230	ENST00000590638	INTS6L	Q5JSJ4	861 aa	Known RBP	11.87	□□□□□ -0.51
NEDD4L-230	ENST00000590638	B4GALNT3	Q6L9W6	998 aa		11.87	□□□□□ -0.51
NEDD4L-230	ENST00000590638	STK32A	Q8WU08	396 aa		11.87	□□□□□ -0.51
NEDD4L-230	ENST00000590638	CDCA7	Q9BWT1	371 aa	Predicted RBP	11.87	□□□□□ -0.51
NEDD4L-230	ENST00000590638	BRD1	O95696	1058 aa		11.86	□□□□□ -0.51
NEDD4L-230	ENST00000590638	DHX9	Q08211	1270 aa	Known RBP	11.86	□□□□□ -0.51
NEDD4L-230	ENST00000590638	TMEM164	Q5U3C3	297 aa		11.86	□□□□□ -0.51
NEDD4L-230	ENST00000590638	ANKMY2	Q8IV38	441 aa		11.86	□□□□□ -0.51
NEDD4L-230	ENST00000590638	LARGE2	Q8N3Y3	721 aa		11.86	□□□□□ -0.51
NEDD4L-230	ENST00000590638	PLA2G2E	Q9NZK7	142 aa		11.86	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 78 ms