RNA–Protein interactions for RNA: ENST00000590188.5

CIRBP-227, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-227ENST00000590188 TATP17735 454 aaPredicted RBP24.68■■□□□ 1.54
CIRBP-227ENST00000590188 NHSQ6T4R5 1651 aa24.67■■□□□ 1.54
CIRBP-227ENST00000590188 PLSCR1O15162 318 aa24.67■■□□□ 1.54
CIRBP-227ENST00000590188 CNGB1Q14028 1251 aaPredicted RBP24.66■■□□□ 1.54
CIRBP-227ENST00000590188 SHANK3Q9BYB0 1731 aa24.65■■□□□ 1.54
CIRBP-227ENST00000590188 NBPF14Q5TI25 921 aa24.64■■□□□ 1.54
CIRBP-227ENST00000590188 EIF4A2Q14240 407 aaKnown RBP24.63■■□□□ 1.53
CIRBP-227ENST00000590188 AMER1Q5JTC6 1135 aaPredicted RBP24.63■■□□□ 1.53
CIRBP-227ENST00000590188 SYTL4Q96C24 671 aaPredicted RBP24.63■■□□□ 1.53
CIRBP-227ENST00000590188 EYA1Q99502 592 aa24.63■■□□□ 1.53
CIRBP-227ENST00000590188 KAT6BQ8WYB5 2073 aa24.63■■□□□ 1.53
CIRBP-227ENST00000590188 PROM2Q8N271 834 aa24.62■■□□□ 1.53
CIRBP-227ENST00000590188 RGPD3A6NKT7 1758 aaPredicted RBP24.62■■□□□ 1.53
CIRBP-227ENST00000590188 RGPD4Q7Z3J3 1758 aa24.62■■□□□ 1.53
CIRBP-227ENST00000590188 CC2D1BQ5T0F9 858 aaKnown RBP24.61■■□□□ 1.53
CIRBP-227ENST00000590188 TXNRD1Q16881 649 aa24.6■■□□□ 1.53
CIRBP-227ENST00000590188 DOT1LQ8TEK3 1739 aa24.6■■□□□ 1.53
CIRBP-227ENST00000590188 BTAF1O14981 1849 aa24.59■■□□□ 1.53
CIRBP-227ENST00000590188 PRIM1P49642 420 aaKnown RBP24.59■■□□□ 1.53
CIRBP-227ENST00000590188 ANO8Q9HCE9 1232 aaPredicted RBP24.59■■□□□ 1.53
CIRBP-227ENST00000590188 PER1O15534 1290 aaPredicted RBP24.58■■□□□ 1.53
CIRBP-227ENST00000590188 PCDH11XQ9BZA7 1347 aa24.57■■□□□ 1.52
CIRBP-227ENST00000590188 PCDH11YQ9BZA8 1340 aa24.57■■□□□ 1.52
CIRBP-227ENST00000590188 NCAPD2Q15021 1401 aa24.56■■□□□ 1.52
CIRBP-227ENST00000590188 CYP27B1O15528 508 aa24.54■■□□□ 1.52
CIRBP-227ENST00000590188 SRCAPQ6ZRS2 3230 aa24.53■■□□□ 1.52
CIRBP-227ENST00000590188 PKD1L3Q7Z443 1732 aa24.52■■□□□ 1.52
CIRBP-227ENST00000590188 SPG7Q9UQ90 795 aa24.51■■□□□ 1.51
CIRBP-227ENST00000590188 IGSF1Q8N6C5 1336 aa24.51■■□□□ 1.51
CIRBP-227ENST00000590188 LRP5O75197 1615 aa24.5■■□□□ 1.51
CIRBP-227ENST00000590188 STK32BQ9NY57 414 aa24.5■■□□□ 1.51
CIRBP-227ENST00000590188 MTHFSP49914 203 aa24.49■■□□□ 1.51
CIRBP-227ENST00000590188 KCNQ4P56696 695 aa24.49■■□□□ 1.51
CIRBP-227ENST00000590188 AEBP1Q8IUX7 1158 aa24.48■■□□□ 1.51
CIRBP-227ENST00000590188 LRRC4BQ9NT99 713 aa24.48■■□□□ 1.51
CIRBP-227ENST00000590188 PDGFDQ9GZP0 370 aaPredicted RBP24.47■■□□□ 1.51
CIRBP-227ENST00000590188 SLC15A2Q16348 729 aa24.46■■□□□ 1.51
CIRBP-227ENST00000590188 MPRIPQ6WCQ1 1025 aa24.46■■□□□ 1.51
CIRBP-227ENST00000590188 TOGARAM1Q9Y4F4 1720 aa24.45■■□□□ 1.5
CIRBP-227ENST00000590188 IL13P35225 146 aa24.45■■□□□ 1.5
CIRBP-227ENST00000590188 SULT6B1Q6IMI4 303 aa24.44■■□□□ 1.5
CIRBP-227ENST00000590188 PHKG2P15735 406 aa24.43■■□□□ 1.5
CIRBP-227ENST00000590188 ZNF827Q17R98 1081 aa24.43■■□□□ 1.5
CIRBP-227ENST00000590188 IFNL2Q8IZJ0 200 aa24.43■■□□□ 1.5
CIRBP-227ENST00000590188 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.43■■□□□ 1.5
CIRBP-227ENST00000590188 PAPPAQ13219 1627 aa24.43■■□□□ 1.5
CIRBP-227ENST00000590188 NPC1L1Q9UHC9 1359 aa24.42■■□□□ 1.5
CIRBP-227ENST00000590188 SLC27A3Q5K4L6 730 aa24.41■■□□□ 1.5
CIRBP-227ENST00000590188 CCNL1Q9UK58 526 aaPredicted RBP24.41■■□□□ 1.5
CIRBP-227ENST00000590188 ZBTB7AO95365 584 aa24.4■■□□□ 1.5
CIRBP-227ENST00000590188 NKX1-1Q15270 411 aaPredicted RBP24.4■■□□□ 1.5
CIRBP-227ENST00000590188 CASZ1Q86V15 1759 aa24.39■■□□□ 1.5
CIRBP-227ENST00000590188 PLEKHO1Q53GL0 409 aaPredicted RBP24.39■■□□□ 1.49
CIRBP-227ENST00000590188 ZNF530Q6P9A1 599 aaPredicted RBP24.39■■□□□ 1.49
CIRBP-227ENST00000590188 ITGB4P16144 1822 aa24.39■■□□□ 1.49
CIRBP-227ENST00000590188 LY75O60449 1722 aa24.38■■□□□ 1.49
CIRBP-227ENST00000590188 HMOX1P09601 288 aa24.38■■□□□ 1.49
CIRBP-227ENST00000590188 PIGBQ92521 554 aa24.38■■□□□ 1.49
CIRBP-227ENST00000590188 SPON1Q9HCB6 807 aa24.38■■□□□ 1.49
CIRBP-227ENST00000590188 DIAPH1O60610 1272 aaKnown RBP24.37■■□□□ 1.49
CIRBP-227ENST00000590188 PALLDQ8WX93 1383 aa24.37■■□□□ 1.49
CIRBP-227ENST00000590188 TMOD3Q9NYL9 352 aa24.36■■□□□ 1.49
CIRBP-227ENST00000590188 ATF5Q9Y2D1 282 aaPredicted RBP24.36■■□□□ 1.49
CIRBP-227ENST00000590188 AKT1S1Q96B36 256 aa24.35■■□□□ 1.49
CIRBP-227ENST00000590188 KDRP35968 1356 aa24.34■■□□□ 1.49
CIRBP-227ENST00000590188 AMOTQ4VCS5 1084 aa24.34■■□□□ 1.49
CIRBP-227ENST00000590188 PPP1R1BQ9UD71 204 aaPredicted RBP24.34■■□□□ 1.49
CIRBP-227ENST00000590188 PLEKHG2Q9H7P9 1386 aa24.32■■□□□ 1.48
CIRBP-227ENST00000590188 U2SURPO15042 1029 aaKnown RBP24.32■■□□□ 1.48
CIRBP-227ENST00000590188 C1orf141Q5JVX7 400 aa24.32■■□□□ 1.48
CIRBP-227ENST00000590188 TFCP2L1Q9NZI6 479 aa24.32■■□□□ 1.48
CIRBP-227ENST00000590188 COL3A1P02461 1466 aaPredicted RBP24.32■■□□□ 1.48
CIRBP-227ENST00000590188 SMARCC1Q92922 1105 aaPredicted RBP24.31■■□□□ 1.48
CIRBP-227ENST00000590188 KDM6AO15550 1401 aaPredicted RBP24.3■■□□□ 1.48
CIRBP-227ENST00000590188 HSP90AB1P08238 724 aaKnown RBP24.3■■□□□ 1.48
CIRBP-227ENST00000590188 ASAP1Q9ULH1 1129 aa24.3■■□□□ 1.48
CIRBP-227ENST00000590188 DCAF5Q96JK2 942 aa24.29■■□□□ 1.48
CIRBP-227ENST00000590188 PNPLA7Q6ZV29 1317 aa24.29■■□□□ 1.48
CIRBP-227ENST00000590188 PPP2R1AP30153 589 aa24.28■■□□□ 1.48
CIRBP-227ENST00000590188 TUBGCP6Q96RT7 1819 aa24.28■■□□□ 1.48
CIRBP-227ENST00000590188 MTFR1LQ9H019 292 aa24.27■■□□□ 1.48
CIRBP-227ENST00000590188 C5P01031 1676 aa24.27■■□□□ 1.48
CIRBP-227ENST00000590188 MSH5O43196 834 aa24.26■■□□□ 1.47
CIRBP-227ENST00000590188 CABP4P57796 275 aa24.26■■□□□ 1.47
CIRBP-227ENST00000590188 CFAP53Q96M91 514 aa24.26■■□□□ 1.47
CIRBP-227ENST00000590188 ATG3Q9NT62 314 aa24.26■■□□□ 1.47
CIRBP-227ENST00000590188 ERVV-2B6SEH9 535 aa24.25■■□□□ 1.47
CIRBP-227ENST00000590188 PTGER2P43116 358 aa24.25■■□□□ 1.47
CIRBP-227ENST00000590188 LOC102724428A0A0B4J2F2 783 aa24.24■■□□□ 1.47
CIRBP-227ENST00000590188 SIK1P57059 783 aa24.24■■□□□ 1.47
CIRBP-227ENST00000590188 MTHFSDQ2M296 383 aaKnown RBP24.23■■□□□ 1.47
CIRBP-227ENST00000590188 AKAP4Q5JQC9 854 aa24.23■■□□□ 1.47
CIRBP-227ENST00000590188 TAF1LQ8IZX4 1826 aa24.22■■□□□ 1.47
CIRBP-227ENST00000590188 RBM42Q9BTD8 480 aaKnown RBP24.22■■□□□ 1.47
CIRBP-227ENST00000590188 QSER1Q2KHR3 1735 aa24.21■■□□□ 1.47
CIRBP-227ENST00000590188 ATP6V1AP38606 617 aa24.21■■□□□ 1.47
CIRBP-227ENST00000590188 SMIM5Q71RC9 77 aa24.21■■□□□ 1.47
CIRBP-227ENST00000590188 LINC00116Q8NCU8 138 aa24.21■■□□□ 1.47
CIRBP-227ENST00000590188 AK7Q96M32 723 aa24.21■■□□□ 1.47
CIRBP-227ENST00000590188 DDX10Q13206 875 aaKnown RBP24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms