RNA–Protein interactions for RNA: ENST00000589964.1

CROCCP3-203, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 3 BASIC

Gene CROCCP3, Length 255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-203ENST00000589964 NBPF14Q5TI25 921 aa23.4■■□□□ 1.34
CROCCP3-203ENST00000589964 FLT4P35916 1363 aa23.4■■□□□ 1.34
CROCCP3-203ENST00000589964 KCNQ4P56696 695 aa23.39■■□□□ 1.33
CROCCP3-203ENST00000589964 LRRC4BQ9NT99 713 aa23.39■■□□□ 1.33
CROCCP3-203ENST00000589964 KAT6BQ8WYB5 2073 aa23.37■■□□□ 1.33
CROCCP3-203ENST00000589964 TNNT2P45379 298 aaPredicted RBP23.37■■□□□ 1.33
CROCCP3-203ENST00000589964 PPM1GO15355 546 aaPredicted RBP23.36■■□□□ 1.33
CROCCP3-203ENST00000589964 ZCRB1Q8TBF4 217 aaKnown RBP23.36■■□□□ 1.33
CROCCP3-203ENST00000589964 PANK3Q9H999 370 aa23.36■■□□□ 1.33
CROCCP3-203ENST00000589964 PRIM1P49642 420 aaKnown RBP23.35■■□□□ 1.33
CROCCP3-203ENST00000589964 ZNF827Q17R98 1081 aa23.35■■□□□ 1.33
CROCCP3-203ENST00000589964 ZBTB7AO95365 584 aa23.34■■□□□ 1.33
CROCCP3-203ENST00000589964 POLKQ9UBT6 870 aa23.34■■□□□ 1.33
CROCCP3-203ENST00000589964 CGNL1Q0VF96 1302 aa23.33■■□□□ 1.33
CROCCP3-203ENST00000589964 NCAPD2Q15021 1401 aa23.33■■□□□ 1.32
CROCCP3-203ENST00000589964 MAP2P11137 1827 aaKnown RBP23.32■■□□□ 1.32
CROCCP3-203ENST00000589964 SMG6Q86US8 1419 aaKnown RBP23.32■■□□□ 1.32
CROCCP3-203ENST00000589964 TOGARAM1Q9Y4F4 1720 aa23.31■■□□□ 1.32
CROCCP3-203ENST00000589964 SLC15A2Q16348 729 aa23.31■■□□□ 1.32
CROCCP3-203ENST00000589964 SYTL4Q96C24 671 aaPredicted RBP23.31■■□□□ 1.32
CROCCP3-203ENST00000589964 CYP27B1O15528 508 aa23.3■■□□□ 1.32
CROCCP3-203ENST00000589964 KIF24Q5T7B8 1368 aa23.29■■□□□ 1.32
CROCCP3-203ENST00000589964 PTGER2P43116 358 aa23.28■■□□□ 1.32
CROCCP3-203ENST00000589964 RAPGEF4Q8WZA2 1011 aa23.28■■□□□ 1.32
CROCCP3-203ENST00000589964 EYA1Q99502 592 aa23.28■■□□□ 1.32
CROCCP3-203ENST00000589964 SPON1Q9HCB6 807 aa23.28■■□□□ 1.32
CROCCP3-203ENST00000589964 STK32BQ9NY57 414 aa23.28■■□□□ 1.32
CROCCP3-203ENST00000589964 ATF5Q9Y2D1 282 aaPredicted RBP23.28■■□□□ 1.32
CROCCP3-203ENST00000589964 WASHC2AQ641Q2 1341 aa23.28■■□□□ 1.32
CROCCP3-203ENST00000589964 PKD1L3Q7Z443 1732 aa23.27■■□□□ 1.32
CROCCP3-203ENST00000589964 KIF7Q2M1P5 1343 aa23.27■■□□□ 1.32
CROCCP3-203ENST00000589964 TATP17735 454 aaPredicted RBP23.26■■□□□ 1.31
CROCCP3-203ENST00000589964 EIF4A2Q14240 407 aaKnown RBP23.26■■□□□ 1.31
CROCCP3-203ENST00000589964 TUBGCP6Q96RT7 1819 aa23.26■■□□□ 1.31
CROCCP3-203ENST00000589964 LY75O60449 1722 aa23.25■■□□□ 1.31
CROCCP3-203ENST00000589964 AKT1S1Q96B36 256 aa23.24■■□□□ 1.31
CROCCP3-203ENST00000589964 SGIP1Q9BQI5 828 aa23.21■■□□□ 1.31
CROCCP3-203ENST00000589964 PCDH11XQ9BZA7 1347 aa23.2■■□□□ 1.3
CROCCP3-203ENST00000589964 PCDH11YQ9BZA8 1340 aa23.2■■□□□ 1.3
CROCCP3-203ENST00000589964 PNPLA7Q6ZV29 1317 aa23.18■■□□□ 1.3
CROCCP3-203ENST00000589964 AMER1Q5JTC6 1135 aaPredicted RBP23.18■■□□□ 1.3
CROCCP3-203ENST00000589964 PPP1R1BQ9UD71 204 aaPredicted RBP23.18■■□□□ 1.3
CROCCP3-203ENST00000589964 ITGB4P16144 1822 aa23.17■■□□□ 1.3
CROCCP3-203ENST00000589964 AEBP1Q8IUX7 1158 aa23.17■■□□□ 1.3
CROCCP3-203ENST00000589964 SMIM5Q71RC9 77 aa23.16■■□□□ 1.3
CROCCP3-203ENST00000589964 IGSF1Q8N6C5 1336 aa23.15■■□□□ 1.3
CROCCP3-203ENST00000589964 SLC27A3Q5K4L6 730 aa23.15■■□□□ 1.3
CROCCP3-203ENST00000589964 MPRIPQ6WCQ1 1025 aa23.15■■□□□ 1.3
CROCCP3-203ENST00000589964 MORC1Q86VD1 984 aa23.15■■□□□ 1.3
CROCCP3-203ENST00000589964 AMIGO3Q86WK7 504 aa23.15■■□□□ 1.3
CROCCP3-203ENST00000589964 CCNL1Q9UK58 526 aaPredicted RBP23.15■■□□□ 1.3
CROCCP3-203ENST00000589964 PIGBQ92521 554 aa23.14■■□□□ 1.29
CROCCP3-203ENST00000589964 MTFR1LQ9H019 292 aa23.14■■□□□ 1.29
CROCCP3-203ENST00000589964 PALLDQ8WX93 1383 aa23.13■■□□□ 1.29
CROCCP3-203ENST00000589964 QSER1Q2KHR3 1735 aa23.12■■□□□ 1.29
CROCCP3-203ENST00000589964 PHKG2P15735 406 aa23.11■■□□□ 1.29
CROCCP3-203ENST00000589964 NKX1-1Q15270 411 aaPredicted RBP23.11■■□□□ 1.29
CROCCP3-203ENST00000589964 FHDC1Q9C0D6 1143 aaPredicted RBP23.11■■□□□ 1.29
CROCCP3-203ENST00000589964 C5P01031 1676 aa23.1■■□□□ 1.29
CROCCP3-203ENST00000589964 PER1O15534 1290 aaPredicted RBP23.1■■□□□ 1.29
CROCCP3-203ENST00000589964 KNSTRNQ9Y448 316 aa23.1■■□□□ 1.29
CROCCP3-203ENST00000589964 TFCP2L1Q9NZI6 479 aa23.09■■□□□ 1.29
CROCCP3-203ENST00000589964 TAF1LQ8IZX4 1826 aa23.08■■□□□ 1.29
CROCCP3-203ENST00000589964 CNGB1Q14028 1251 aaPredicted RBP23.08■■□□□ 1.29
CROCCP3-203ENST00000589964 ASAP1Q9ULH1 1129 aa23.08■■□□□ 1.29
CROCCP3-203ENST00000589964 SPG7Q9UQ90 795 aa23.08■■□□□ 1.29
CROCCP3-203ENST00000589964 COL23A1Q86Y22 540 aaPredicted RBP23.07■■□□□ 1.28
CROCCP3-203ENST00000589964 COL24A1Q17RW2 1714 aa23.07■■□□□ 1.28
CROCCP3-203ENST00000589964 KDM6AO15550 1401 aaPredicted RBP23.07■■□□□ 1.28
CROCCP3-203ENST00000589964 IL13P35225 146 aa23.05■■□□□ 1.28
CROCCP3-203ENST00000589964 CC2D1BQ5T0F9 858 aaKnown RBP23.05■■□□□ 1.28
CROCCP3-203ENST00000589964 MSL1Q68DK7 614 aa23.05■■□□□ 1.28
CROCCP3-203ENST00000589964 SYT17Q9BSW7 474 aa23.05■■□□□ 1.28
CROCCP3-203ENST00000589964 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.05■■□□□ 1.28
CROCCP3-203ENST00000589964 ITPK1Q13572 414 aa23.04■■□□□ 1.28
CROCCP3-203ENST00000589964 ARXQ96QS3 562 aa23.04■■□□□ 1.28
CROCCP3-203ENST00000589964 C4BP0C0L5 1744 aa23.04■■□□□ 1.28
CROCCP3-203ENST00000589964 MTHFSP49914 203 aa23.02■■□□□ 1.28
CROCCP3-203ENST00000589964 IFNL2Q8IZJ0 200 aa23.02■■□□□ 1.28
CROCCP3-203ENST00000589964 LINC00116Q8NCU8 138 aa23.02■■□□□ 1.28
CROCCP3-203ENST00000589964 SLC4A9Q96Q91 983 aa23.02■■□□□ 1.28
CROCCP3-203ENST00000589964 ATG3Q9NT62 314 aa23.02■■□□□ 1.28
CROCCP3-203ENST00000589964 SULT6B1Q6IMI4 303 aa23.01■■□□□ 1.27
CROCCP3-203ENST00000589964 ZNF530Q6P9A1 599 aaPredicted RBP23.01■■□□□ 1.27
CROCCP3-203ENST00000589964 TMOD3Q9NYL9 352 aa23■■□□□ 1.27
CROCCP3-203ENST00000589964 MSH5O43196 834 aa22.99■■□□□ 1.27
CROCCP3-203ENST00000589964 KDRP35968 1356 aa22.99■■□□□ 1.27
CROCCP3-203ENST00000589964 LOC102724428A0A0B4J2F2 783 aa22.98■■□□□ 1.27
CROCCP3-203ENST00000589964 SIK1P57059 783 aa22.98■■□□□ 1.27
CROCCP3-203ENST00000589964 NLGN2Q8NFZ4 835 aa22.98■■□□□ 1.27
CROCCP3-203ENST00000589964 UBR3Q6ZT12 1888 aa22.98■■□□□ 1.27
CROCCP3-203ENST00000589964 COL3A1P02461 1466 aaPredicted RBP22.98■■□□□ 1.27
CROCCP3-203ENST00000589964 KLHL34Q8N239 644 aa22.97■■□□□ 1.27
CROCCP3-203ENST00000589964 PHF14O94880 888 aa22.96■■□□□ 1.27
CROCCP3-203ENST00000589964 HMOX1P09601 288 aa22.96■■□□□ 1.27
CROCCP3-203ENST00000589964 SLC16A10Q8TF71 515 aa22.96■■□□□ 1.27
CROCCP3-203ENST00000589964 SMARCC1Q92922 1105 aaPredicted RBP22.96■■□□□ 1.27
CROCCP3-203ENST00000589964 PLEKHO1Q53GL0 409 aaPredicted RBP22.95■■□□□ 1.26
CROCCP3-203ENST00000589964 MAP3K5Q99683 1374 aa22.94■■□□□ 1.26
CROCCP3-203ENST00000589964 PLEKHG2Q9H7P9 1386 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms