RNA–Protein interactions for RNA: ENST00000589480.5

PRKAR1A-219, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, humanhuman

TSL 2

Gene PRKAR1A, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1A-219ENST00000589480 COL23A1Q86Y22 540 aaPredicted RBP14.08□□□□□ -0.16
PRKAR1A-219ENST00000589480 USHBP1Q8N6Y0 703 aa14.08□□□□□ -0.16
PRKAR1A-219ENST00000589480 USP47Q96K76 1375 aa14.08□□□□□ -0.16
PRKAR1A-219ENST00000589480 BTAF1O14981 1849 aa14.07□□□□□ -0.16
PRKAR1A-219ENST00000589480 YBX3P16989 372 aaKnown RBP eCLIP14.07□□□□□ -0.162e-6■■□□□ 11.4
PRKAR1A-219ENST00000589480 RRS1Q15050 365 aaKnown RBP14.07□□□□□ -0.16
PRKAR1A-219ENST00000589480 RAPGEF4Q8WZA2 1011 aa14.07□□□□□ -0.16
PRKAR1A-219ENST00000589480 PAPPAQ13219 1627 aa14.06□□□□□ -0.16
PRKAR1A-219ENST00000589480 TATP17735 454 aaPredicted RBP14.06□□□□□ -0.16
PRKAR1A-219ENST00000589480 TONSLQ96HA7 1378 aa14.06□□□□□ -0.16
PRKAR1A-219ENST00000589480 MON2Q7Z3U7 1717 aa14.05□□□□□ -0.16
PRKAR1A-219ENST00000589480 NBPF6Q5VWK0 638 aa14.05□□□□□ -0.16
PRKAR1A-219ENST00000589480 NBPF4Q96M43 638 aa14.05□□□□□ -0.16
PRKAR1A-219ENST00000589480 PUS7Q96PZ0 661 aaKnown RBP14.05□□□□□ -0.16
PRKAR1A-219ENST00000589480 ST20-MTHFSA0A0A6YYL1 179 aa14.04□□□□□ -0.16
PRKAR1A-219ENST00000589480 MPRIPQ6WCQ1 1025 aa14.04□□□□□ -0.16
PRKAR1A-219ENST00000589480 GGNBP2Q9H3C7 697 aa14.04□□□□□ -0.16
PRKAR1A-219ENST00000589480 ZNF526Q8TF50 670 aaPredicted RBP14.03□□□□□ -0.16
PRKAR1A-219ENST00000589480 WWC3Q9ULE0 1092 aa14.03□□□□□ -0.16
PRKAR1A-219ENST00000589480 LTN1O94822 1766 aa14.03□□□□□ -0.16
PRKAR1A-219ENST00000589480 CHD4Q14839 1912 aa14.02□□□□□ -0.16
PRKAR1A-219ENST00000589480 NSD2O96028 1365 aa14.02□□□□□ -0.17
PRKAR1A-219ENST00000589480 FLAD1Q8NFF5 587 aa14.02□□□□□ -0.17
PRKAR1A-219ENST00000589480 GPBP1L1Q9HC44 474 aaPredicted RBP14.02□□□□□ -0.17
PRKAR1A-219ENST00000589480 MEGF6O75095 1541 aa14.01□□□□□ -0.17
PRKAR1A-219ENST00000589480 PHF14O94880 888 aa14.01□□□□□ -0.17
PRKAR1A-219ENST00000589480 HMGB2P26583 209 aaKnown RBP14.01□□□□□ -0.17
PRKAR1A-219ENST00000589480 AK7Q96M32 723 aa14.01□□□□□ -0.17
PRKAR1A-219ENST00000589480 SMG6Q86US8 1419 aaKnown RBP14□□□□□ -0.17
PRKAR1A-219ENST00000589480 CGNL1Q0VF96 1302 aa14□□□□□ -0.17
PRKAR1A-219ENST00000589480 FYB1O15117 783 aa14□□□□□ -0.17
PRKAR1A-219ENST00000589480 SLC24A1O60721 1099 aa14□□□□□ -0.17
PRKAR1A-219ENST00000589480 HSP90AB2PQ58FF8 381 aa14□□□□□ -0.17
PRKAR1A-219ENST00000589480 TESK2Q96S53 571 aa14□□□□□ -0.17
PRKAR1A-219ENST00000589480 CD2APQ9Y5K6 639 aa14□□□□□ -0.17
PRKAR1A-219ENST00000589480 PCDH11XQ9BZA7 1347 aa13.99□□□□□ -0.17
PRKAR1A-219ENST00000589480 PCDH11YQ9BZA8 1340 aa13.99□□□□□ -0.17
PRKAR1A-219ENST00000589480 ATP10DQ9P241 1426 aa13.98□□□□□ -0.17
PRKAR1A-219ENST00000589480 PALLDQ8WX93 1383 aa13.98□□□□□ -0.17
PRKAR1A-219ENST00000589480 PPM1GO15355 546 aaPredicted RBP13.98□□□□□ -0.17
PRKAR1A-219ENST00000589480 TMF1P82094 1093 aa13.98□□□□□ -0.17
PRKAR1A-219ENST00000589480 IFFO2Q5TF58 517 aa13.98□□□□□ -0.17
PRKAR1A-219ENST00000589480 SMIM5Q71RC9 77 aa13.98□□□□□ -0.17
PRKAR1A-219ENST00000589480 SMARCC1Q92922 1105 aaPredicted RBP13.98□□□□□ -0.17
PRKAR1A-219ENST00000589480 USP54Q70EL1 1684 aa13.98□□□□□ -0.17
PRKAR1A-219ENST00000589480 RTL1A6NKG5 1358 aa13.96□□□□□ -0.17
PRKAR1A-219ENST00000589480 UTRNP46939 3433 aa13.96□□□□□ -0.17
PRKAR1A-219ENST00000589480 CYP27B1O15528 508 aa13.95□□□□□ -0.18
PRKAR1A-219ENST00000589480 DOT1LQ8TEK3 1739 aa13.95□□□□□ -0.18
PRKAR1A-219ENST00000589480 IGSF1Q8N6C5 1336 aa13.94□□□□□ -0.18
PRKAR1A-219ENST00000589480 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.94□□□□□ -0.18
PRKAR1A-219ENST00000589480 PIGBQ92521 554 aa13.94□□□□□ -0.18
PRKAR1A-219ENST00000589480 SPG7Q9UQ90 795 aa13.93□□□□□ -0.18
PRKAR1A-219ENST00000589480 EMILIN1Q9Y6C2 1016 aa13.93□□□□□ -0.18
PRKAR1A-219ENST00000589480 INSRP06213 1382 aa13.93□□□□□ -0.18
PRKAR1A-219ENST00000589480 FAM208AQ9UK61 1670 aaKnown RBP13.92□□□□□ -0.18
PRKAR1A-219ENST00000589480 HSPA6P17066 643 aa13.92□□□□□ -0.18
PRKAR1A-219ENST00000589480 AMIGO3Q86WK7 504 aa13.92□□□□□ -0.18
PRKAR1A-219ENST00000589480 TMOD3Q9NYL9 352 aa13.92□□□□□ -0.18
PRKAR1A-219ENST00000589480 FLT4P35916 1363 aa13.92□□□□□ -0.18
PRKAR1A-219ENST00000589480 SHANK3Q9BYB0 1731 aa13.92□□□□□ -0.18
PRKAR1A-219ENST00000589480 QSER1Q2KHR3 1735 aa13.91□□□□□ -0.18
PRKAR1A-219ENST00000589480 LOC102724428A0A0B4J2F2 783 aa13.91□□□□□ -0.18
PRKAR1A-219ENST00000589480 GNPATO15228 680 aa13.91□□□□□ -0.18
PRKAR1A-219ENST00000589480 ATP6V1AP38606 617 aa13.91□□□□□ -0.18
PRKAR1A-219ENST00000589480 SIK1P57059 783 aa13.91□□□□□ -0.18
PRKAR1A-219ENST00000589480 CDCA8Q53HL2 280 aa13.91□□□□□ -0.18
PRKAR1A-219ENST00000589480 LINC00116Q8NCU8 138 aa13.91□□□□□ -0.18
PRKAR1A-219ENST00000589480 LY75O60449 1722 aa13.9□□□□□ -0.18
PRKAR1A-219ENST00000589480 SSFA2P28290 1259 aa13.9□□□□□ -0.18
PRKAR1A-219ENST00000589480 TUBGCP6Q96RT7 1819 aa13.9□□□□□ -0.18
PRKAR1A-219ENST00000589480 RGPD2P0DJD1 1756 aa13.89□□□□□ -0.19
PRKAR1A-219ENST00000589480 POLR3GLQ9BT43 218 aa13.89□□□□□ -0.19
PRKAR1A-219ENST00000589480 ASAP1Q9ULH1 1129 aa13.89□□□□□ -0.19
PRKAR1A-219ENST00000589480 BCS1LQ9Y276 419 aa13.88□□□□□ -0.19
PRKAR1A-219ENST00000589480 NSD3Q9BZ95 1437 aa13.88□□□□□ -0.19
PRKAR1A-219ENST00000589480 MMP10P09238 476 aa13.87□□□□□ -0.19
PRKAR1A-219ENST00000589480 ITPK1Q13572 414 aa13.87□□□□□ -0.19
PRKAR1A-219ENST00000589480 NKX1-1Q15270 411 aaPredicted RBP13.87□□□□□ -0.19
PRKAR1A-219ENST00000589480 TRAPPC3LQ5T215 181 aa13.87□□□□□ -0.19
PRKAR1A-219ENST00000589480 IFNL2Q8IZJ0 200 aa13.87□□□□□ -0.19
PRKAR1A-219ENST00000589480 RBM42Q9BTD8 480 aaKnown RBP13.87□□□□□ -0.19
PRKAR1A-219ENST00000589480 CARD14Q9BXL6 1004 aa13.87□□□□□ -0.19
PRKAR1A-219ENST00000589480 COL24A1Q17RW2 1714 aa13.87□□□□□ -0.19
PRKAR1A-219ENST00000589480 TNNT2P45379 298 aaPredicted RBP13.86□□□□□ -0.19
PRKAR1A-219ENST00000589480 ARHGAP27Q6ZUM4 889 aa13.86□□□□□ -0.19
PRKAR1A-219ENST00000589480 EYA1Q99502 592 aa13.86□□□□□ -0.19
PRKAR1A-219ENST00000589480 KIF24Q5T7B8 1368 aa13.85□□□□□ -0.19
PRKAR1A-219ENST00000589480 A0A0G2JLW4 131 aa13.85□□□□□ -0.19
PRKAR1A-219ENST00000589480 ATG3Q9NT62 314 aa13.85□□□□□ -0.19
PRKAR1A-219ENST00000589480 RTCBQ9Y3I0 505 aaKnown RBP13.85□□□□□ -0.19
PRKAR1A-219ENST00000589480 ADCY9O60503 1353 aa13.84□□□□□ -0.19
PRKAR1A-219ENST00000589480 KIF3CO14782 793 aa13.84□□□□□ -0.19
PRKAR1A-219ENST00000589480 PHKG2P15735 406 aa13.84□□□□□ -0.19
PRKAR1A-219ENST00000589480 C5P01031 1676 aa13.84□□□□□ -0.19
PRKAR1A-219ENST00000589480 NLGN1Q8N2Q7 840 aa13.83□□□□□ -0.2
PRKAR1A-219ENST00000589480 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.83□□□□□ -0.2
PRKAR1A-219ENST00000589480 C4BP0C0L5 1744 aa13.83□□□□□ -0.2
PRKAR1A-219ENST00000589480 WASHC2AQ641Q2 1341 aa13.83□□□□□ -0.2
PRKAR1A-219ENST00000589480 FCHSD2O94868 740 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms