RNA–Protein interactions for RNA: ENST00000589381.5

ERCC1-210, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-210ENST00000589381 MARCH10Q8NA82 808 aaPredicted RBP24.77■■□□□ 1.56
ERCC1-210ENST00000589381 ZCRB1Q8TBF4 217 aaKnown RBP24.77■■□□□ 1.56
ERCC1-210ENST00000589381 PKD1L3Q7Z443 1732 aa24.77■■□□□ 1.56
ERCC1-210ENST00000589381 CCDC125Q86Z20 511 aa24.75■■□□□ 1.55
ERCC1-210ENST00000589381 DDX54Q8TDD1 881 aaKnown RBP24.75■■□□□ 1.55
ERCC1-210ENST00000589381 SF3B2Q13435 895 aaKnown RBP24.74■■□□□ 1.55
ERCC1-210ENST00000589381 SULT6B1Q6IMI4 303 aa24.73■■□□□ 1.55
ERCC1-210ENST00000589381 U2SURPO15042 1029 aaKnown RBP24.72■■□□□ 1.55
ERCC1-210ENST00000589381 MYBBP1AQ9BQG0 1328 aaKnown RBP24.71■■□□□ 1.55
ERCC1-210ENST00000589381 AEBP1Q8IUX7 1158 aa24.71■■□□□ 1.55
ERCC1-210ENST00000589381 SPG7Q9UQ90 795 aa24.71■■□□□ 1.55
ERCC1-210ENST00000589381 NUDCQ9Y266 331 aa24.71■■□□□ 1.55
ERCC1-210ENST00000589381 TNS1Q9HBL0 1735 aaKnown RBP24.71■■□□□ 1.55
ERCC1-210ENST00000589381 KDRP35968 1356 aa24.7■■□□□ 1.55
ERCC1-210ENST00000589381 PCDH11XQ9BZA7 1347 aa24.7■■□□□ 1.54
ERCC1-210ENST00000589381 PCDH11YQ9BZA8 1340 aa24.7■■□□□ 1.54
ERCC1-210ENST00000589381 TRIM37O94972 964 aa24.7■■□□□ 1.54
ERCC1-210ENST00000589381 PRKRIP1Q9H875 184 aaPredicted RBP24.7■■□□□ 1.54
ERCC1-210ENST00000589381 BCL9O00512 1426 aa24.69■■□□□ 1.54
ERCC1-210ENST00000589381 PLEKHG2Q9H7P9 1386 aa24.69■■□□□ 1.54
ERCC1-210ENST00000589381 HMOX1P09601 288 aa24.68■■□□□ 1.54
ERCC1-210ENST00000589381 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.68■■□□□ 1.54
ERCC1-210ENST00000589381 DOT1LQ8TEK3 1739 aa24.66■■□□□ 1.54
ERCC1-210ENST00000589381 NHSQ6T4R5 1651 aa24.66■■□□□ 1.54
ERCC1-210ENST00000589381 PLEKHO1Q53GL0 409 aaPredicted RBP24.66■■□□□ 1.54
ERCC1-210ENST00000589381 AMOTQ4VCS5 1084 aa24.64■■□□□ 1.54
ERCC1-210ENST00000589381 CYP27B1O15528 508 aa24.63■■□□□ 1.53
ERCC1-210ENST00000589381 U2AF1L5P0DN76 240 aaPredicted RBP24.63■■□□□ 1.53
ERCC1-210ENST00000589381 BAG6P46379 1132 aa24.63■■□□□ 1.53
ERCC1-210ENST00000589381 U2AF1Q01081 240 aaKnown RBP eCLIP24.63■■□□□ 1.53
ERCC1-210ENST00000589381 ACSBG1Q96GR2 724 aa24.63■■□□□ 1.53
ERCC1-210ENST00000589381 ANP32CO43423 234 aa24.62■■□□□ 1.53
ERCC1-210ENST00000589381 BCL11BQ9C0K0 894 aaPredicted RBP24.62■■□□□ 1.53
ERCC1-210ENST00000589381 BTAF1O14981 1849 aa24.61■■□□□ 1.53
ERCC1-210ENST00000589381 APBA3O96018 575 aa24.61■■□□□ 1.53
ERCC1-210ENST00000589381 IFNL2Q8IZJ0 200 aa24.61■■□□□ 1.53
ERCC1-210ENST00000589381 ITGB4P16144 1822 aa24.61■■□□□ 1.53
ERCC1-210ENST00000589381 ZNF530Q6P9A1 599 aaPredicted RBP24.6■■□□□ 1.53
ERCC1-210ENST00000589381 VIRMAQ69YN4 1812 aaKnown RBP24.6■■□□□ 1.53
ERCC1-210ENST00000589381 DEFB132Q7Z7B7 95 aa24.59■■□□□ 1.53
ERCC1-210ENST00000589381 KCNQ2O43526 872 aa24.58■■□□□ 1.53
ERCC1-210ENST00000589381 PHKG2P15735 406 aa24.58■■□□□ 1.53
ERCC1-210ENST00000589381 C1orf141Q5JVX7 400 aa24.58■■□□□ 1.53
ERCC1-210ENST00000589381 SYTL4Q96C24 671 aaPredicted RBP24.58■■□□□ 1.53
ERCC1-210ENST00000589381 TOGARAM1Q9Y4F4 1720 aa24.57■■□□□ 1.52
ERCC1-210ENST00000589381 HSP90AB1P08238 724 aaKnown RBP24.56■■□□□ 1.52
ERCC1-210ENST00000589381 RGPD3A6NKT7 1758 aaPredicted RBP24.56■■□□□ 1.52
ERCC1-210ENST00000589381 RGPD4Q7Z3J3 1758 aa24.56■■□□□ 1.52
ERCC1-210ENST00000589381 FCHSD2O94868 740 aa24.55■■□□□ 1.52
ERCC1-210ENST00000589381 PRKAR2BP31323 418 aa24.55■■□□□ 1.52
ERCC1-210ENST00000589381 PRIM1P49642 420 aaKnown RBP24.55■■□□□ 1.52
ERCC1-210ENST00000589381 EN1Q05925 392 aaPredicted RBP24.55■■□□□ 1.52
ERCC1-210ENST00000589381 NKX1-1Q15270 411 aaPredicted RBP24.55■■□□□ 1.52
ERCC1-210ENST00000589381 PTF1AQ7RTS3 328 aa24.55■■□□□ 1.52
ERCC1-210ENST00000589381 RSPH6AQ9H0K4 717 aa24.55■■□□□ 1.52
ERCC1-210ENST00000589381 SCN11AQ9UI33 1791 aa24.53■■□□□ 1.52
ERCC1-210ENST00000589381 NEFMP07197 916 aa24.52■■□□□ 1.52
ERCC1-210ENST00000589381 DCAF5Q96JK2 942 aa24.51■■□□□ 1.51
ERCC1-210ENST00000589381 PNNQ9H307 717 aaKnown RBP24.51■■□□□ 1.51
ERCC1-210ENST00000589381 WDR43Q15061 677 aaKnown RBP eCLIP24.5■■□□□ 1.51
ERCC1-210ENST00000589381 MTHFSDQ2M296 383 aaKnown RBP24.5■■□□□ 1.51
ERCC1-210ENST00000589381 AKAP4Q5JQC9 854 aa24.5■■□□□ 1.51
ERCC1-210ENST00000589381 GAS2L2Q8NHY3 880 aa24.5■■□□□ 1.51
ERCC1-210ENST00000589381 PLSCR1O15162 318 aa24.49■■□□□ 1.51
ERCC1-210ENST00000589381 EZH2Q15910 746 aaKnown RBP24.49■■□□□ 1.51
ERCC1-210ENST00000589381 MPRIPQ6WCQ1 1025 aa24.49■■□□□ 1.51
ERCC1-210ENST00000589381 CAMKK2Q96RR4 588 aa24.49■■□□□ 1.51
ERCC1-210ENST00000589381 RREB1Q92766 1687 aa24.49■■□□□ 1.51
ERCC1-210ENST00000589381 PHACTR3Q96KR7 559 aa24.47■■□□□ 1.51
ERCC1-210ENST00000589381 DLG5Q8TDM6 1919 aa24.47■■□□□ 1.51
ERCC1-210ENST00000589381 TMOD3Q9NYL9 352 aa24.46■■□□□ 1.51
ERCC1-210ENST00000589381 KDM6AO15550 1401 aaPredicted RBP24.45■■□□□ 1.51
ERCC1-210ENST00000589381 ERVV-2B6SEH9 535 aa24.45■■□□□ 1.5
ERCC1-210ENST00000589381 NUP188Q5SRE5 1749 aa24.44■■□□□ 1.5
ERCC1-210ENST00000589381 MAPK8IP3Q9UPT6 1336 aa24.44■■□□□ 1.5
ERCC1-210ENST00000589381 LY75O60449 1722 aa24.44■■□□□ 1.5
ERCC1-210ENST00000589381 MAP3K5Q99683 1374 aa24.43■■□□□ 1.5
ERCC1-210ENST00000589381 CABP4P57796 275 aa24.43■■□□□ 1.5
ERCC1-210ENST00000589381 GNAT3A8MTJ3 354 aa24.42■■□□□ 1.5
ERCC1-210ENST00000589381 PIGBQ92521 554 aa24.42■■□□□ 1.5
ERCC1-210ENST00000589381 ADAMTS7Q9UKP4 1686 aa24.41■■□□□ 1.5
ERCC1-210ENST00000589381 RNMTO43148 476 aaKnown RBP24.4■■□□□ 1.5
ERCC1-210ENST00000589381 TXNRD1Q16881 649 aa24.4■■□□□ 1.5
ERCC1-210ENST00000589381 PLEKHF1Q96S99 279 aa24.4■■□□□ 1.5
ERCC1-210ENST00000589381 MRS2Q9HD23 443 aa24.4■■□□□ 1.5
ERCC1-210ENST00000589381 SMARCC1Q92922 1105 aaPredicted RBP24.39■■□□□ 1.49
ERCC1-210ENST00000589381 LGR6Q9HBX8 967 aa24.39■■□□□ 1.49
ERCC1-210ENST00000589381 CCDC184Q52MB2 194 aa24.38■■□□□ 1.49
ERCC1-210ENST00000589381 ADAMTS8Q9UP79 889 aa24.38■■□□□ 1.49
ERCC1-210ENST00000589381 PROM2Q8N271 834 aa24.37■■□□□ 1.49
ERCC1-210ENST00000589381 NFATC2IPQ8NCF5 419 aa24.37■■□□□ 1.49
ERCC1-210ENST00000589381 RTF1Q92541 710 aaKnown RBP24.37■■□□□ 1.49
ERCC1-210ENST00000589381 PALLDQ8WX93 1383 aa24.37■■□□□ 1.49
ERCC1-210ENST00000589381 SLC52A2Q9HAB3 445 aa24.36■■□□□ 1.49
ERCC1-210ENST00000589381 SIPA1L3O60292 1781 aaPredicted RBP24.35■■□□□ 1.49
ERCC1-210ENST00000589381 MRC1P22897 1456 aa24.35■■□□□ 1.49
ERCC1-210ENST00000589381 NFE2L2Q16236 605 aa24.35■■□□□ 1.49
ERCC1-210ENST00000589381 SLC27A3Q5K4L6 730 aa24.35■■□□□ 1.49
ERCC1-210ENST00000589381 NBPF14Q5TI25 921 aa24.35■■□□□ 1.49
ERCC1-210ENST00000589381 CCDC146Q8IYE0 955 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms