RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 COL23A1Q86Y22 540 aaPredicted RBP30.96■■■□□ 2.55
CAPNS1-205ENST00000588780 SLC12A5Q9H2X9 1139 aa30.96■■■□□ 2.55
CAPNS1-205ENST00000588780 COL24A1Q17RW2 1714 aa30.95■■■□□ 2.55
CAPNS1-205ENST00000588780 ZNF526Q8TF50 670 aaPredicted RBP30.95■■■□□ 2.55
CAPNS1-205ENST00000588780 SIN3AQ96ST3 1273 aa30.95■■■□□ 2.55
CAPNS1-205ENST00000588780 TERF2IPQ9NYB0 399 aa30.95■■■□□ 2.55
CAPNS1-205ENST00000588780 USP54Q70EL1 1684 aa30.94■■■□□ 2.54
CAPNS1-205ENST00000588780 ZCRB1Q8TBF4 217 aaKnown RBP30.94■■■□□ 2.54
CAPNS1-205ENST00000588780 GOLGB1Q14789 3259 aaKnown RBP30.94■■■□□ 2.54
CAPNS1-205ENST00000588780 USP47Q96K76 1375 aa30.93■■■□□ 2.54
CAPNS1-205ENST00000588780 EDC4Q6P2E9 1401 aaKnown RBP30.93■■■□□ 2.54
CAPNS1-205ENST00000588780 CD163L1Q9NR16 1453 aa30.92■■■□□ 2.54
CAPNS1-205ENST00000588780 DOT1LQ8TEK3 1739 aa30.92■■■□□ 2.54
CAPNS1-205ENST00000588780 AMPHP49418 695 aa30.91■■■□□ 2.54
CAPNS1-205ENST00000588780 CEP350Q5VT06 3117 aa30.91■■■□□ 2.54
CAPNS1-205ENST00000588780 NSD2O96028 1365 aa30.89■■■□□ 2.54
CAPNS1-205ENST00000588780 LY75O60449 1722 aa30.88■■■□□ 2.53
CAPNS1-205ENST00000588780 FAM208AQ9UK61 1670 aaKnown RBP30.87■■■□□ 2.53
CAPNS1-205ENST00000588780 CARD11Q9BXL7 1154 aa30.87■■■□□ 2.53
CAPNS1-205ENST00000588780 HSPA6P17066 643 aa30.86■■■□□ 2.53
CAPNS1-205ENST00000588780 COG3Q96JB2 828 aa30.86■■■□□ 2.53
CAPNS1-205ENST00000588780 CD2APQ9Y5K6 639 aa30.86■■■□□ 2.53
CAPNS1-205ENST00000588780 A0A1W2PP64 1363 aa30.85■■■□□ 2.53
CAPNS1-205ENST00000588780 HOXC9P31274 260 aa30.84■■■□□ 2.53
CAPNS1-205ENST00000588780 MAP3K19Q56UN5 1328 aa30.83■■■□□ 2.53
CAPNS1-205ENST00000588780 FLAD1Q8NFF5 587 aa30.82■■■□□ 2.52
CAPNS1-205ENST00000588780 WWC3Q9ULE0 1092 aa30.82■■■□□ 2.52
CAPNS1-205ENST00000588780 MEGF6O75095 1541 aa30.8■■■□□ 2.52
CAPNS1-205ENST00000588780 FBLN1P23142 703 aa30.8■■■□□ 2.52
CAPNS1-205ENST00000588780 HMGB2P26583 209 aaKnown RBP30.8■■■□□ 2.52
CAPNS1-205ENST00000588780 RAPGEF4Q8WZA2 1011 aa30.79■■■□□ 2.52
CAPNS1-205ENST00000588780 USHBP1Q8N6Y0 703 aa30.78■■■□□ 2.52
CAPNS1-205ENST00000588780 AK7Q96M32 723 aa30.75■■■□□ 2.51
CAPNS1-205ENST00000588780 RGPD2P0DJD1 1756 aa30.74■■■□□ 2.51
CAPNS1-205ENST00000588780 TATP17735 454 aaPredicted RBP30.74■■■□□ 2.51
CAPNS1-205ENST00000588780 MPRIPQ6WCQ1 1025 aa30.74■■■□□ 2.51
CAPNS1-205ENST00000588780 PHF14O94880 888 aa30.73■■■□□ 2.51
CAPNS1-205ENST00000588780 NBPF6Q5VWK0 638 aa30.73■■■□□ 2.51
CAPNS1-205ENST00000588780 NBPF4Q96M43 638 aa30.73■■■□□ 2.51
CAPNS1-205ENST00000588780 ADCY9O60503 1353 aa30.73■■■□□ 2.51
CAPNS1-205ENST00000588780 PALLDQ8WX93 1383 aa30.73■■■□□ 2.51
CAPNS1-205ENST00000588780 C5P01031 1676 aa30.73■■■□□ 2.51
CAPNS1-205ENST00000588780 CGNL1Q0VF96 1302 aa30.73■■■□□ 2.51
CAPNS1-205ENST00000588780 IGSF1Q8N6C5 1336 aa30.73■■■□□ 2.51
CAPNS1-205ENST00000588780 SMG6Q86US8 1419 aaKnown RBP30.71■■■□□ 2.51
CAPNS1-205ENST00000588780 RRS1Q15050 365 aaKnown RBP30.7■■■□□ 2.51
CAPNS1-205ENST00000588780 PCDH11XQ9BZA7 1347 aa30.69■■■□□ 2.5
CAPNS1-205ENST00000588780 PCDH11YQ9BZA8 1340 aa30.69■■■□□ 2.5
CAPNS1-205ENST00000588780 PUS7Q96PZ0 661 aaKnown RBP30.68■■■□□ 2.5
CAPNS1-205ENST00000588780 SMARCC1Q92922 1105 aaPredicted RBP30.66■■■□□ 2.5
CAPNS1-205ENST00000588780 RTL1A6NKG5 1358 aa30.66■■■□□ 2.5
CAPNS1-205ENST00000588780 SMIM5Q71RC9 77 aa30.64■■■□□ 2.5
CAPNS1-205ENST00000588780 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.63■■■□□ 2.49
CAPNS1-205ENST00000588780 KIF3CO14782 793 aa30.61■■■□□ 2.49
CAPNS1-205ENST00000588780 C4BP0C0L5 1744 aa30.6■■■□□ 2.49
CAPNS1-205ENST00000588780 APLP1P51693 650 aa30.6■■■□□ 2.49
CAPNS1-205ENST00000588780 AMIGO3Q86WK7 504 aa30.6■■■□□ 2.49
CAPNS1-205ENST00000588780 TAF1LQ8IZX4 1826 aa30.6■■■□□ 2.49
CAPNS1-205ENST00000588780 NSD3Q9BZ95 1437 aa30.6■■■□□ 2.49
CAPNS1-205ENST00000588780 GGNBP2Q9H3C7 697 aa30.6■■■□□ 2.49
CAPNS1-205ENST00000588780 CYP27B1O15528 508 aa30.56■■■□□ 2.48
CAPNS1-205ENST00000588780 HSP90AB2PQ58FF8 381 aa30.56■■■□□ 2.48
CAPNS1-205ENST00000588780 SSFA2P28290 1259 aa30.55■■■□□ 2.48
CAPNS1-205ENST00000588780 PIGBQ92521 554 aa30.54■■■□□ 2.48
CAPNS1-205ENST00000588780 ST20-MTHFSA0A0A6YYL1 179 aa30.53■■■□□ 2.48
CAPNS1-205ENST00000588780 FYB1O15117 783 aa30.52■■■□□ 2.48
CAPNS1-205ENST00000588780 GNPATO15228 680 aa30.52■■■□□ 2.48
CAPNS1-205ENST00000588780 LOC102724428A0A0B4J2F2 783 aa30.51■■■□□ 2.47
CAPNS1-205ENST00000588780 SIK1P57059 783 aa30.51■■■□□ 2.47
CAPNS1-205ENST00000588780 LINC00116Q8NCU8 138 aa30.51■■■□□ 2.47
CAPNS1-205ENST00000588780 BCS1LQ9Y276 419 aa30.51■■■□□ 2.47
CAPNS1-205ENST00000588780 INSRP06213 1382 aa30.51■■■□□ 2.47
CAPNS1-205ENST00000588780 TONSLQ96HA7 1378 aa30.51■■■□□ 2.47
CAPNS1-205ENST00000588780 SLC24A1O60721 1099 aa30.5■■■□□ 2.47
CAPNS1-205ENST00000588780 TOMM70O94826 608 aa30.5■■■□□ 2.47
CAPNS1-205ENST00000588780 TESK2Q96S53 571 aa30.5■■■□□ 2.47
CAPNS1-205ENST00000588780 UBR3Q6ZT12 1888 aa30.5■■■□□ 2.47
CAPNS1-205ENST00000588780 MMP10P09238 476 aa30.49■■■□□ 2.47
CAPNS1-205ENST00000588780 TOGARAM1Q9Y4F4 1720 aa30.49■■■□□ 2.47
CAPNS1-205ENST00000588780 FLT4P35916 1363 aa30.49■■■□□ 2.47
CAPNS1-205ENST00000588780 ITGB4P16144 1822 aa30.48■■■□□ 2.47
CAPNS1-205ENST00000588780 TMOD3Q9NYL9 352 aa30.48■■■□□ 2.47
CAPNS1-205ENST00000588780 ARHGAP27Q6ZUM4 889 aa30.47■■■□□ 2.47
CAPNS1-205ENST00000588780 SPG7Q9UQ90 795 aa30.47■■■□□ 2.47
CAPNS1-205ENST00000588780 ATP6V1AP38606 617 aa30.46■■■□□ 2.47
CAPNS1-205ENST00000588780 PPM1GO15355 546 aaPredicted RBP30.44■■■□□ 2.46
CAPNS1-205ENST00000588780 C16orf71Q8IYS4 520 aaPredicted RBP30.44■■■□□ 2.46
CAPNS1-205ENST00000588780 A0A0G2JLW4 131 aa30.43■■■□□ 2.46
CAPNS1-205ENST00000588780 DNAJC5GQ8N7S2 189 aa30.42■■■□□ 2.46
CAPNS1-205ENST00000588780 NMRK2Q9NPI5 230 aa30.42■■■□□ 2.46
CAPNS1-205ENST00000588780 ASAP1Q9ULH1 1129 aa30.42■■■□□ 2.46
CAPNS1-205ENST00000588780 TGFB2P61812 414 aa30.41■■■□□ 2.46
CAPNS1-205ENST00000588780 ITPK1Q13572 414 aa30.41■■■□□ 2.46
CAPNS1-205ENST00000588780 PXDNLA1KZ92 1463 aa30.4■■■□□ 2.46
CAPNS1-205ENST00000588780 NKX1-1Q15270 411 aaPredicted RBP30.4■■■□□ 2.46
CAPNS1-205ENST00000588780 CICQ96RK0 1608 aaPredicted RBP30.4■■■□□ 2.46
CAPNS1-205ENST00000588780 FCHSD2O94868 740 aa30.39■■■□□ 2.46
CAPNS1-205ENST00000588780 TRAPPC3LQ5T215 181 aa30.39■■■□□ 2.46
CAPNS1-205ENST00000588780 EMILIN1Q9Y6C2 1016 aa30.39■■■□□ 2.46
CAPNS1-205ENST00000588780 KIF24Q5T7B8 1368 aa30.39■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms