RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 GNAI1P63096 354 aa17.73■□□□□ 0.43
NEDD4L-223ENST00000588516 R3HDM1Q15032 1099 aaKnown RBP17.73■□□□□ 0.43
NEDD4L-223ENST00000588516 NFKBIBQ15653 356 aa17.73■□□□□ 0.43
NEDD4L-223ENST00000588516 WASLO00401 505 aaPredicted RBP17.72■□□□□ 0.43
NEDD4L-223ENST00000588516 NFE2L2Q16236 605 aa17.72■□□□□ 0.43
NEDD4L-223ENST00000588516 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.72■□□□□ 0.43
NEDD4L-223ENST00000588516 SLIT2O94813 1529 aa17.72■□□□□ 0.43
NEDD4L-223ENST00000588516 SSH1Q8WYL5 1049 aa17.72■□□□□ 0.43
NEDD4L-223ENST00000588516 CFAP44Q96MT7 982 aa17.72■□□□□ 0.43
NEDD4L-223ENST00000588516 TECPR2O15040 1411 aa17.71■□□□□ 0.43
NEDD4L-223ENST00000588516 CPSF1Q10570 1443 aaKnown RBP17.71■□□□□ 0.43
NEDD4L-223ENST00000588516 EN1Q05925 392 aaPredicted RBP17.71■□□□□ 0.42
NEDD4L-223ENST00000588516 ITPRIPQ8IWB1 547 aa17.71■□□□□ 0.42
NEDD4L-223ENST00000588516 BCL2L13Q9BXK5 485 aa17.71■□□□□ 0.42
NEDD4L-223ENST00000588516 IFT57Q9NWB7 429 aa17.71■□□□□ 0.42
NEDD4L-223ENST00000588516 PXDNQ92626 1479 aa17.7■□□□□ 0.42
NEDD4L-223ENST00000588516 TRIM27P14373 513 aa17.7■□□□□ 0.42
NEDD4L-223ENST00000588516 GSE1Q14687 1217 aa17.7■□□□□ 0.42
NEDD4L-223ENST00000588516 VPS72Q15906 364 aa17.7■□□□□ 0.42
NEDD4L-223ENST00000588516 TSR2Q969E8 191 aaKnown RBP17.7■□□□□ 0.42
NEDD4L-223ENST00000588516 RSPH6AQ9H0K4 717 aa17.7■□□□□ 0.42
NEDD4L-223ENST00000588516 POLKQ9UBT6 870 aa17.7■□□□□ 0.42
NEDD4L-223ENST00000588516 MAP2P11137 1827 aaKnown RBP17.69■□□□□ 0.42
NEDD4L-223ENST00000588516 NUTM2FA1L443 756 aa17.69■□□□□ 0.42
NEDD4L-223ENST00000588516 PLEKHG5O94827 1062 aa17.69■□□□□ 0.42
NEDD4L-223ENST00000588516 SMC5Q8IY18 1101 aa17.69■□□□□ 0.42
NEDD4L-223ENST00000588516 COG3Q96JB2 828 aa17.69■□□□□ 0.42
NEDD4L-223ENST00000588516 TBC1D32Q96NH3 1257 aa17.69■□□□□ 0.42
NEDD4L-223ENST00000588516 NOB1Q9ULX3 412 aaKnown RBP17.69■□□□□ 0.42
NEDD4L-223ENST00000588516 PRKAR2BP31323 418 aa17.68■□□□□ 0.42
NEDD4L-223ENST00000588516 CCDC61Q9Y6R9 512 aa17.68■□□□□ 0.42
NEDD4L-223ENST00000588516 ONECUT3O60422 494 aaPredicted RBP17.67■□□□□ 0.42
NEDD4L-223ENST00000588516 USP19O94966 1318 aa17.67■□□□□ 0.42
NEDD4L-223ENST00000588516 ITSN1Q15811 1721 aa17.67■□□□□ 0.42
NEDD4L-223ENST00000588516 KIF24Q5T7B8 1368 aa17.67■□□□□ 0.42
NEDD4L-223ENST00000588516 ZBTB40Q9NUA8 1239 aa17.67■□□□□ 0.42
NEDD4L-223ENST00000588516 MON2Q7Z3U7 1717 aa17.66■□□□□ 0.42
NEDD4L-223ENST00000588516 GCC1Q96CN9 775 aa17.66■□□□□ 0.42
NEDD4L-223ENST00000588516 SPATA31A3Q5VYP0 1347 aa17.65■□□□□ 0.42
NEDD4L-223ENST00000588516 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.65■□□□□ 0.422e-6■■■□□ 18.1
NEDD4L-223ENST00000588516 API5Q9BZZ5 524 aaKnown RBP17.65■□□□□ 0.42
NEDD4L-223ENST00000588516 AKAP12Q02952 1782 aa17.65■□□□□ 0.42
NEDD4L-223ENST00000588516 NUDT16Q96DE0 195 aaKnown RBP17.64■□□□□ 0.41
NEDD4L-223ENST00000588516 DCAF8L1A6NGE4 600 aa17.63■□□□□ 0.41
NEDD4L-223ENST00000588516 IL13P35225 146 aa17.63■□□□□ 0.41
NEDD4L-223ENST00000588516 WAPLQ7Z5K2 1190 aa17.63■□□□□ 0.41
NEDD4L-223ENST00000588516 TMEM57Q8N5G2 664 aa17.63■□□□□ 0.41
NEDD4L-223ENST00000588516 SLC4A3P48751 1232 aa17.62■□□□□ 0.41
NEDD4L-223ENST00000588516 FAM98CQ17RN3 349 aaKnown RBP17.62■□□□□ 0.41
NEDD4L-223ENST00000588516 CABLES1Q8TDN4 633 aa17.62■□□□□ 0.41
NEDD4L-223ENST00000588516 NUCB1Q02818 461 aa17.61■□□□□ 0.41
NEDD4L-223ENST00000588516 KRT28Q7Z3Y7 464 aa17.61■□□□□ 0.41
NEDD4L-223ENST00000588516 TNNQ9UQP3 1299 aa17.61■□□□□ 0.41
NEDD4L-223ENST00000588516 ZNF853P0CG23 659 aa17.6■□□□□ 0.41
NEDD4L-223ENST00000588516 EZH2Q15910 746 aaKnown RBP17.6■□□□□ 0.41
NEDD4L-223ENST00000588516 FAM182BQ5T319 152 aa17.6■□□□□ 0.41
NEDD4L-223ENST00000588516 C22orf23Q9BZE7 217 aa17.6■□□□□ 0.41
NEDD4L-223ENST00000588516 VAMP4O75379 141 aa17.59■□□□□ 0.41
NEDD4L-223ENST00000588516 LMOD2Q6P5Q4 547 aa17.59■□□□□ 0.41
NEDD4L-223ENST00000588516 MRPL50Q8N5N7 158 aaKnown RBP17.59■□□□□ 0.41
NEDD4L-223ENST00000588516 SEC24BO95487 1268 aa17.57■□□□□ 0.4
NEDD4L-223ENST00000588516 PPP1R1BQ9UD71 204 aaPredicted RBP17.57■□□□□ 0.4
NEDD4L-223ENST00000588516 NRKQ7Z2Y5 1582 aa17.57■□□□□ 0.4
NEDD4L-223ENST00000588516 PSME1Q06323 249 aa17.56■□□□□ 0.4
NEDD4L-223ENST00000588516 CHD1LQ86WJ1 897 aa17.56■□□□□ 0.4
NEDD4L-223ENST00000588516 TTC21BQ7Z4L5 1316 aa17.56■□□□□ 0.4
NEDD4L-223ENST00000588516 PLEKHG3A1L390 1219 aa17.55■□□□□ 0.4
NEDD4L-223ENST00000588516 FAM83GA6ND36 823 aa17.55■□□□□ 0.4
NEDD4L-223ENST00000588516 TWISTNBQ3B726 338 aaPredicted RBP17.55■□□□□ 0.4
NEDD4L-223ENST00000588516 BMP2KLQ5H9B9 411 aa17.55■□□□□ 0.4
NEDD4L-223ENST00000588516 HSCBQ8IWL3 235 aa17.55■□□□□ 0.4
NEDD4L-223ENST00000588516 ABCC4O15439 1325 aa17.55■□□□□ 0.4
NEDD4L-223ENST00000588516 ZBTB7BO15156 539 aaPredicted RBP17.54■□□□□ 0.4
NEDD4L-223ENST00000588516 PTMSP20962 102 aa17.54■□□□□ 0.4
NEDD4L-223ENST00000588516 NME9Q86XW9 330 aa17.54■□□□□ 0.4
NEDD4L-223ENST00000588516 RGPD1P0DJD0 1748 aa17.54■□□□□ 0.4
NEDD4L-223ENST00000588516 PLCH1Q4KWH8 1693 aa17.54■□□□□ 0.4
NEDD4L-223ENST00000588516 FRAT2O75474 233 aaPredicted RBP17.53■□□□□ 0.4
NEDD4L-223ENST00000588516 HMOX1P09601 288 aa17.53■□□□□ 0.4
NEDD4L-223ENST00000588516 CHMP5Q9NZZ3 219 aa17.53■□□□□ 0.4
NEDD4L-223ENST00000588516 EMILIN1Q9Y6C2 1016 aa17.53■□□□□ 0.4
NEDD4L-223ENST00000588516 TTC21AQ8NDW8 1320 aa17.53■□□□□ 0.4
NEDD4L-223ENST00000588516 NWD2Q9ULI1 1742 aa17.52■□□□□ 0.4
NEDD4L-223ENST00000588516 KIAA0232Q92628 1395 aa17.52■□□□□ 0.4
NEDD4L-223ENST00000588516 L1TD1Q5T7N2 865 aaKnown RBP17.52■□□□□ 0.4
NEDD4L-223ENST00000588516 PHACTR3Q96KR7 559 aa17.52■□□□□ 0.4
NEDD4L-223ENST00000588516 TBC1D2Q9BYX2 928 aa17.52■□□□□ 0.4
NEDD4L-223ENST00000588516 MBIPQ9NS73 344 aa17.52■□□□□ 0.4
NEDD4L-223ENST00000588516 BTG4Q9NY30 223 aa17.52■□□□□ 0.4
NEDD4L-223ENST00000588516 DISP2A7MBM2 1401 aa17.52■□□□□ 0.4
NEDD4L-223ENST00000588516 TNS3Q68CZ2 1445 aa17.52■□□□□ 0.4
NEDD4L-223ENST00000588516 DLG5Q8TDM6 1919 aa17.52■□□□□ 0.4
NEDD4L-223ENST00000588516 TRIM37O94972 964 aa17.51■□□□□ 0.39
NEDD4L-223ENST00000588516 RBM25P49756 843 aaKnown RBP17.51■□□□□ 0.39
NEDD4L-223ENST00000588516 SNX21Q969T3 373 aa17.51■□□□□ 0.39
NEDD4L-223ENST00000588516 CAMKK2Q96RR4 588 aa17.51■□□□□ 0.39
NEDD4L-223ENST00000588516 TOPAZ1Q8N9V7 1692 aa17.51■□□□□ 0.39
NEDD4L-223ENST00000588516 ANTXR1Q9H6X2 564 aa17.5■□□□□ 0.39
NEDD4L-223ENST00000588516 PHF8Q9UPP1 1060 aa17.5■□□□□ 0.39
NEDD4L-223ENST00000588516 PTPRCP08575 1304 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms