RNA–Protein interactions for RNA: ENST00000588200.1

PKN1-211, Transcript of protein kinase N1, humanhuman

TSL 3

Gene PKN1, Length 548 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-211ENST00000588200 RRS1Q15050 365 aaKnown RBP18.58■□□□□ 0.56
PKN1-211ENST00000588200 DDX54Q8TDD1 881 aaKnown RBP18.58■□□□□ 0.56
PKN1-211ENST00000588200 SGIP1Q9BQI5 828 aa18.58■□□□□ 0.56
PKN1-211ENST00000588200 MTFR1LQ9H019 292 aa18.58■□□□□ 0.56
PKN1-211ENST00000588200 SMG6Q86US8 1419 aaKnown RBP18.57■□□□□ 0.56
PKN1-211ENST00000588200 LRRC4BQ9NT99 713 aa18.57■□□□□ 0.56
PKN1-211ENST00000588200 LY75O60449 1722 aa18.57■□□□□ 0.56
PKN1-211ENST00000588200 NCAPD2Q15021 1401 aa18.57■□□□□ 0.56
PKN1-211ENST00000588200 ANKRD26Q9UPS8 1709 aa18.56■□□□□ 0.56
PKN1-211ENST00000588200 NSD2O96028 1365 aa18.55■□□□□ 0.56
PKN1-211ENST00000588200 COL24A1Q17RW2 1714 aa18.55■□□□□ 0.56
PKN1-211ENST00000588200 DOT1LQ8TEK3 1739 aa18.55■□□□□ 0.56
PKN1-211ENST00000588200 HSP90AB2PQ58FF8 381 aa18.55■□□□□ 0.56
PKN1-211ENST00000588200 AKT1S1Q96B36 256 aa18.55■□□□□ 0.56
PKN1-211ENST00000588200 ZBTB7AO95365 584 aa18.54■□□□□ 0.56
PKN1-211ENST00000588200 SLC16A10Q8TF71 515 aa18.54■□□□□ 0.56
PKN1-211ENST00000588200 NSD3Q9BZ95 1437 aa18.54■□□□□ 0.56
PKN1-211ENST00000588200 PRIM1P49642 420 aaKnown RBP18.53■□□□□ 0.56
PKN1-211ENST00000588200 RAPGEF4Q8WZA2 1011 aa18.53■□□□□ 0.56
PKN1-211ENST00000588200 MAP3K5Q99683 1374 aa18.53■□□□□ 0.56
PKN1-211ENST00000588200 HMGB2P26583 209 aaKnown RBP18.52■□□□□ 0.56
PKN1-211ENST00000588200 WASHC2AQ641Q2 1341 aa18.51■□□□□ 0.55
PKN1-211ENST00000588200 DCAF8L1A6NGE4 600 aa18.51■□□□□ 0.55
PKN1-211ENST00000588200 TATP17735 454 aaPredicted RBP18.51■□□□□ 0.55
PKN1-211ENST00000588200 ZNF827Q17R98 1081 aa18.51■□□□□ 0.55
PKN1-211ENST00000588200 ATF5Q9Y2D1 282 aaPredicted RBP18.51■□□□□ 0.55
PKN1-211ENST00000588200 MAP2P11137 1827 aaKnown RBP18.5■□□□□ 0.55
PKN1-211ENST00000588200 PLEKHG2Q9H7P9 1386 aa18.5■□□□□ 0.55
PKN1-211ENST00000588200 PCDH11XQ9BZA7 1347 aa18.49■□□□□ 0.55
PKN1-211ENST00000588200 PCDH11YQ9BZA8 1340 aa18.49■□□□□ 0.55
PKN1-211ENST00000588200 PKD1L3Q7Z443 1732 aa18.49■□□□□ 0.55
PKN1-211ENST00000588200 GOLGB1Q14789 3259 aaKnown RBP18.49■□□□□ 0.55
PKN1-211ENST00000588200 SYT17Q9BSW7 474 aa18.48■□□□□ 0.55
PKN1-211ENST00000588200 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.48■□□□□ 0.55
PKN1-211ENST00000588200 EMILIN1Q9Y6C2 1016 aa18.48■□□□□ 0.55
PKN1-211ENST00000588200 NKX1-1Q15270 411 aaPredicted RBP18.47■□□□□ 0.55
PKN1-211ENST00000588200 USHBP1Q8N6Y0 703 aa18.47■□□□□ 0.55
PKN1-211ENST00000588200 SYTL4Q96C24 671 aaPredicted RBP18.47■□□□□ 0.55
PKN1-211ENST00000588200 PCGF6Q9BYE7 350 aa18.47■□□□□ 0.55
PKN1-211ENST00000588200 TUBGCP6Q96RT7 1819 aa18.46■□□□□ 0.55
PKN1-211ENST00000588200 CYP27B1O15528 508 aa18.46■□□□□ 0.55
PKN1-211ENST00000588200 EIF4G2P78344 907 aaKnown RBP eCLIP18.46■□□□□ 0.55
PKN1-211ENST00000588200 ARXQ96QS3 562 aa18.46■□□□□ 0.55
PKN1-211ENST00000588200 FHDC1Q9C0D6 1143 aaPredicted RBP18.46■□□□□ 0.55
PKN1-211ENST00000588200 PNPLA7Q6ZV29 1317 aa18.46■□□□□ 0.55
PKN1-211ENST00000588200 POLKQ9UBT6 870 aa18.45■□□□□ 0.54
PKN1-211ENST00000588200 YY1P25490 414 aa18.44■□□□□ 0.54
PKN1-211ENST00000588200 TFCP2L1Q9NZI6 479 aa18.43■□□□□ 0.54
PKN1-211ENST00000588200 CCNL1Q9UK58 526 aaPredicted RBP18.43■□□□□ 0.54
PKN1-211ENST00000588200 ITGB4P16144 1822 aa18.43■□□□□ 0.54
PKN1-211ENST00000588200 TAF1LQ8IZX4 1826 aa18.42■□□□□ 0.54
PKN1-211ENST00000588200 TOGARAM1Q9Y4F4 1720 aa18.41■□□□□ 0.54
PKN1-211ENST00000588200 EYA1Q99502 592 aa18.41■□□□□ 0.54
PKN1-211ENST00000588200 SPG7Q9UQ90 795 aa18.41■□□□□ 0.54
PKN1-211ENST00000588200 HSPA5P11021 654 aaKnown RBP18.4■□□□□ 0.54
PKN1-211ENST00000588200 SMARCC1Q92922 1105 aaPredicted RBP18.4■□□□□ 0.54
PKN1-211ENST00000588200 C5P01031 1676 aa18.4■□□□□ 0.54
PKN1-211ENST00000588200 POLD1P28340 1107 aa18.39■□□□□ 0.53
PKN1-211ENST00000588200 CHD4Q14839 1912 aa18.39■□□□□ 0.53
PKN1-211ENST00000588200 KCNQ4P56696 695 aa18.38■□□□□ 0.53
PKN1-211ENST00000588200 FLAD1Q8NFF5 587 aa18.38■□□□□ 0.53
PKN1-211ENST00000588200 PALLDQ8WX93 1383 aa18.38■□□□□ 0.53
PKN1-211ENST00000588200 PPM1GO15355 546 aaPredicted RBP18.37■□□□□ 0.53
PKN1-211ENST00000588200 PANK3Q9H999 370 aa18.37■□□□□ 0.53
PKN1-211ENST00000588200 EIF4A2Q14240 407 aaKnown RBP18.36■□□□□ 0.53
PKN1-211ENST00000588200 MPRIPQ6WCQ1 1025 aa18.36■□□□□ 0.53
PKN1-211ENST00000588200 IGSF1Q8N6C5 1336 aa18.35■□□□□ 0.53
PKN1-211ENST00000588200 COL23A1Q86Y22 540 aaPredicted RBP18.35■□□□□ 0.53
PKN1-211ENST00000588200 IFNL2Q8IZJ0 200 aa18.35■□□□□ 0.53
PKN1-211ENST00000588200 PIGBQ92521 554 aa18.35■□□□□ 0.53
PKN1-211ENST00000588200 PHKG2P15735 406 aa18.34■□□□□ 0.53
PKN1-211ENST00000588200 CCER1Q8TC90 406 aaPredicted RBP18.34■□□□□ 0.53
PKN1-211ENST00000588200 C4BP0C0L5 1744 aa18.33■□□□□ 0.52
PKN1-211ENST00000588200 ZNF831Q5JPB2 1677 aa18.32■□□□□ 0.52
PKN1-211ENST00000588200 UBR3Q6ZT12 1888 aa18.32■□□□□ 0.52
PKN1-211ENST00000588200 POLR3GLQ9BT43 218 aa18.3■□□□□ 0.52
PKN1-211ENST00000588200 LOC102724428A0A0B4J2F2 783 aa18.29■□□□□ 0.52
PKN1-211ENST00000588200 ERVV-2B6SEH9 535 aa18.29■□□□□ 0.52
PKN1-211ENST00000588200 SIK1P57059 783 aa18.29■□□□□ 0.52
PKN1-211ENST00000588200 TMOD3Q9NYL9 352 aa18.29■□□□□ 0.52
PKN1-211ENST00000588200 HSP90AB1P08238 724 aaKnown RBP18.28■□□□□ 0.52
PKN1-211ENST00000588200 SSFA2P28290 1259 aa18.28■□□□□ 0.52
PKN1-211ENST00000588200 AMOTQ4VCS5 1084 aa18.28■□□□□ 0.52
PKN1-211ENST00000588200 KDRP35968 1356 aa18.28■□□□□ 0.52
PKN1-211ENST00000588200 TNNT2P45379 298 aaPredicted RBP18.27■□□□□ 0.52
PKN1-211ENST00000588200 AMER1Q5JTC6 1135 aaPredicted RBP18.27■□□□□ 0.52
PKN1-211ENST00000588200 MORC1Q86VD1 984 aa18.27■□□□□ 0.52
PKN1-211ENST00000588200 DCAF5Q96JK2 942 aa18.27■□□□□ 0.52
PKN1-211ENST00000588200 KNSTRNQ9Y448 316 aa18.27■□□□□ 0.52
PKN1-211ENST00000588200 CD2APQ9Y5K6 639 aa18.27■□□□□ 0.52
PKN1-211ENST00000588200 PLEKHO1Q53GL0 409 aaPredicted RBP18.26■□□□□ 0.51
PKN1-211ENST00000588200 ZNF784Q8NCA9 323 aaPredicted RBP18.26■□□□□ 0.51
PKN1-211ENST00000588200 AK7Q96M32 723 aa18.26■□□□□ 0.51
PKN1-211ENST00000588200 ATG3Q9NT62 314 aa18.26■□□□□ 0.51
PKN1-211ENST00000588200 ASAP1Q9ULH1 1129 aa18.26■□□□□ 0.51
PKN1-211ENST00000588200 MSH5O43196 834 aa18.24■□□□□ 0.51
PKN1-211ENST00000588200 GPR162Q16538 588 aa18.24■□□□□ 0.51
PKN1-211ENST00000588200 NLGN2Q8NFZ4 835 aa18.24■□□□□ 0.51
PKN1-211ENST00000588200 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.23■□□□□ 0.51
PKN1-211ENST00000588200 PER1O15534 1290 aaPredicted RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms