RNA–Protein interactions for RNA: ENST00000588161.5

RBM42-203, Transcript of RNA binding motif protein 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBM42, Length 1,609 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM42-203ENST00000588161 TATP17735 454 aaPredicted RBP28.78■■■□□ 2.2
RBM42-203ENST00000588161 NUTM2AQ8IVF1 878 aaPredicted RBP28.78■■■□□ 2.2
RBM42-203ENST00000588161 STRN4Q9NRL3 753 aa28.78■■■□□ 2.2
RBM42-203ENST00000588161 MAP3K5Q99683 1374 aa28.77■■■□□ 2.2
RBM42-203ENST00000588161 THUMPD2Q9BTF0 503 aaKnown RBP28.77■■■□□ 2.2
RBM42-203ENST00000588161 DCTN1Q14203 1278 aa28.76■■■□□ 2.2
RBM42-203ENST00000588161 LARP1Q6PKG0 1096 aaKnown RBP28.76■■■□□ 2.2
RBM42-203ENST00000588161 IFT57Q9NWB7 429 aa28.76■■■□□ 2.2
RBM42-203ENST00000588161 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.76■■■□□ 2.2
RBM42-203ENST00000588161 RCAN3Q9UKA8 241 aa28.76■■■□□ 2.2
RBM42-203ENST00000588161 SPATA31A6Q5VVP1 1343 aa28.76■■■□□ 2.19
RBM42-203ENST00000588161 GNAI1P63096 354 aa28.76■■■□□ 2.19
RBM42-203ENST00000588161 HSPA1LP34931 641 aa28.75■■■□□ 2.19
RBM42-203ENST00000588161 CRB1P82279 1406 aa28.75■■■□□ 2.19
RBM42-203ENST00000588161 ZNF853P0CG23 659 aa28.74■■■□□ 2.19
RBM42-203ENST00000588161 MCM10Q7L590 875 aa28.74■■■□□ 2.19
RBM42-203ENST00000588161 FANCIQ9NVI1 1328 aa28.74■■■□□ 2.19
RBM42-203ENST00000588161 AKAP4Q5JQC9 854 aa28.73■■■□□ 2.19
RBM42-203ENST00000588161 ZNF530Q6P9A1 599 aaPredicted RBP28.73■■■□□ 2.19
RBM42-203ENST00000588161 CFAP44Q96MT7 982 aa28.73■■■□□ 2.19
RBM42-203ENST00000588161 MEGF6O75095 1541 aa28.73■■■□□ 2.19
RBM42-203ENST00000588161 SPG7Q9UQ90 795 aa28.72■■■□□ 2.19
RBM42-203ENST00000588161 TSR2Q969E8 191 aaKnown RBP28.71■■■□□ 2.19
RBM42-203ENST00000588161 PLCH1Q4KWH8 1693 aa28.7■■■□□ 2.19
RBM42-203ENST00000588161 C1orf141Q5JVX7 400 aa28.7■■■□□ 2.19
RBM42-203ENST00000588161 RNF123Q5XPI4 1314 aa28.7■■■□□ 2.18
RBM42-203ENST00000588161 LAS1LQ9Y4W2 734 aaKnown RBP28.69■■■□□ 2.18
RBM42-203ENST00000588161 GTF3C3Q9Y5Q9 886 aa28.69■■■□□ 2.18
RBM42-203ENST00000588161 OVOS2A0A0G2JMS6 1433 aa28.68■■■□□ 2.18
RBM42-203ENST00000588161 CT47B1P0C2W7 299 aaPredicted RBP28.68■■■□□ 2.18
RBM42-203ENST00000588161 IL17REQ8NFR9 667 aa28.68■■■□□ 2.18
RBM42-203ENST00000588161 IL2RBP14784 551 aa28.67■■■□□ 2.18
RBM42-203ENST00000588161 SLIT2O94813 1529 aa28.67■■■□□ 2.18
RBM42-203ENST00000588161 CHL1O00533 1208 aa28.66■■■□□ 2.18
RBM42-203ENST00000588161 NEFLP07196 543 aa28.66■■■□□ 2.18
RBM42-203ENST00000588161 PARP4Q9UKK3 1724 aaKnown RBP28.66■■■□□ 2.18
RBM42-203ENST00000588161 NWD2Q9ULI1 1742 aa28.66■■■□□ 2.18
RBM42-203ENST00000588161 CEMIPQ8WUJ3 1361 aa28.66■■■□□ 2.18
RBM42-203ENST00000588161 LRRC37A3O60309 1634 aa28.66■■■□□ 2.18
RBM42-203ENST00000588161 MBIPQ9NS73 344 aa28.65■■■□□ 2.18
RBM42-203ENST00000588161 PKD1L3Q7Z443 1732 aa28.65■■■□□ 2.18
RBM42-203ENST00000588161 NRAPQ86VF7 1730 aa28.64■■■□□ 2.18
RBM42-203ENST00000588161 EXOSC9Q06265 439 aaKnown RBP28.64■■■□□ 2.18
RBM42-203ENST00000588161 IFNL2Q8IZJ0 200 aa28.62■■■□□ 2.17
RBM42-203ENST00000588161 BABAM1Q9NWV8 329 aa28.62■■■□□ 2.17
RBM42-203ENST00000588161 PHKG2P15735 406 aa28.61■■■□□ 2.17
RBM42-203ENST00000588161 ZCRB1Q8TBF4 217 aaKnown RBP28.61■■■□□ 2.17
RBM42-203ENST00000588161 USP35Q9P2H5 1018 aa28.61■■■□□ 2.17
RBM42-203ENST00000588161 LRP6O75581 1613 aa28.6■■■□□ 2.17
RBM42-203ENST00000588161 RNMTO43148 476 aaKnown RBP28.6■■■□□ 2.17
RBM42-203ENST00000588161 LGR6Q9HBX8 967 aa28.6■■■□□ 2.17
RBM42-203ENST00000588161 TAF7Q15545 349 aaPredicted RBP28.59■■■□□ 2.17
RBM42-203ENST00000588161 MPRIPQ6WCQ1 1025 aa28.59■■■□□ 2.17
RBM42-203ENST00000588161 NGLY1Q96IV0 654 aa28.59■■■□□ 2.17
RBM42-203ENST00000588161 C8orf37Q96NL8 207 aa28.59■■■□□ 2.17
RBM42-203ENST00000588161 RRP1P56182 461 aaKnown RBP28.58■■■□□ 2.17
RBM42-203ENST00000588161 THRAP3Q9Y2W1 955 aaKnown RBP28.58■■■□□ 2.17
RBM42-203ENST00000588161 PCDH11XQ9BZA7 1347 aa28.58■■■□□ 2.17
RBM42-203ENST00000588161 PCDH11YQ9BZA8 1340 aa28.58■■■□□ 2.17
RBM42-203ENST00000588161 HSP90AB1P08238 724 aaKnown RBP28.58■■■□□ 2.17
RBM42-203ENST00000588161 UNC5CLQ8IV45 518 aa28.58■■■□□ 2.17
RBM42-203ENST00000588161 FNBP4Q8N3X1 1017 aaPredicted RBP28.58■■■□□ 2.17
RBM42-203ENST00000588161 ADAMTS7Q9UKP4 1686 aa28.57■■■□□ 2.16
RBM42-203ENST00000588161 SPATA31A1Q5TZJ5 1347 aa28.57■■■□□ 2.16
RBM42-203ENST00000588161 CYP27B1O15528 508 aa28.57■■■□□ 2.16
RBM42-203ENST00000588161 TSPYL4Q9UJ04 414 aa28.57■■■□□ 2.16
RBM42-203ENST00000588161 DISP2A7MBM2 1401 aa28.57■■■□□ 2.16
RBM42-203ENST00000588161 RARSP54136 660 aaKnown RBP28.55■■■□□ 2.16
RBM42-203ENST00000588161 TEFQ10587 303 aa28.55■■■□□ 2.16
RBM42-203ENST00000588161 ZNF428Q96B54 188 aa28.55■■■□□ 2.16
RBM42-203ENST00000588161 CDCA7Q9BWT1 371 aaPredicted RBP28.54■■■□□ 2.16
RBM42-203ENST00000588161 SPATA31A5Q5VU36 1347 aa28.54■■■□□ 2.16
RBM42-203ENST00000588161 SPATA31A7Q8IWB4 1347 aa28.54■■■□□ 2.16
RBM42-203ENST00000588161 FKBP8Q14318 412 aa28.54■■■□□ 2.16
RBM42-203ENST00000588161 DCAF5Q96JK2 942 aa28.54■■■□□ 2.16
RBM42-203ENST00000588161 BCL9LQ86UU0 1499 aa28.53■■■□□ 2.16
RBM42-203ENST00000588161 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.52■■■□□ 2.16
RBM42-203ENST00000588161 MIS18AQ9NYP9 233 aa28.52■■■□□ 2.16
RBM42-203ENST00000588161 MEX3CQ5U5Q3 659 aaKnown RBP28.51■■■□□ 2.15
RBM42-203ENST00000588161 KDM6AO15550 1401 aaPredicted RBP28.51■■■□□ 2.15
RBM42-203ENST00000588161 VAMP4O75379 141 aa28.51■■■□□ 2.15
RBM42-203ENST00000588161 BCAR3O75815 825 aa28.51■■■□□ 2.15
RBM42-203ENST00000588161 VPS72Q15906 364 aa28.51■■■□□ 2.15
RBM42-203ENST00000588161 VIRMAQ69YN4 1812 aaKnown RBP28.5■■■□□ 2.15
RBM42-203ENST00000588161 NKX1-1Q15270 411 aaPredicted RBP28.5■■■□□ 2.15
RBM42-203ENST00000588161 C8orf58Q8NAV2 365 aa28.5■■■□□ 2.15
RBM42-203ENST00000588161 SCN11AQ9UI33 1791 aa28.49■■■□□ 2.15
RBM42-203ENST00000588161 TWISTNBQ3B726 338 aaPredicted RBP28.49■■■□□ 2.15
RBM42-203ENST00000588161 TSPYL6Q8N831 410 aa28.49■■■□□ 2.15
RBM42-203ENST00000588161 WNK3Q9BYP7 1800 aa28.48■■■□□ 2.15
RBM42-203ENST00000588161 ALDH1L2Q3SY69 923 aa28.48■■■□□ 2.15
RBM42-203ENST00000588161 BARGINQ6ZT62 677 aa28.48■■■□□ 2.15
RBM42-203ENST00000588161 SHANK3Q9BYB0 1731 aa28.47■■■□□ 2.15
RBM42-203ENST00000588161 USP21Q9UK80 565 aa28.47■■■□□ 2.15
RBM42-203ENST00000588161 CCDC9Q9Y3X0 531 aaKnown RBP28.47■■■□□ 2.15
RBM42-203ENST00000588161 ERICH6BQ5W0A0 696 aa28.47■■■□□ 2.15
RBM42-203ENST00000588161 SLC52A2Q9HAB3 445 aa28.47■■■□□ 2.15
RBM42-203ENST00000588161 BTBD11A6QL63 1104 aa28.46■■■□□ 2.15
RBM42-203ENST00000588161 EXOC5O00471 708 aa28.46■■■□□ 2.15
RBM42-203ENST00000588161 IRX6P78412 446 aaPredicted RBP28.46■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 221.2 ms