RNA–Protein interactions for RNA: ENST00000587637.2

SF3A2-203, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-203ENST00000587637 TOGARAM1Q9Y4F4 1720 aa23.64■■□□□ 1.38
SF3A2-203ENST00000587637 SYTL4Q96C24 671 aaPredicted RBP23.64■■□□□ 1.37
SF3A2-203ENST00000587637 FYB1O15117 783 aa23.63■■□□□ 1.37
SF3A2-203ENST00000587637 COL24A1Q17RW2 1714 aa23.62■■□□□ 1.37
SF3A2-203ENST00000587637 NBPF6Q5VWK0 638 aa23.62■■□□□ 1.37
SF3A2-203ENST00000587637 NBPF4Q96M43 638 aa23.62■■□□□ 1.37
SF3A2-203ENST00000587637 PRIM1P49642 420 aaKnown RBP23.61■■□□□ 1.37
SF3A2-203ENST00000587637 AKT1S1Q96B36 256 aa23.61■■□□□ 1.37
SF3A2-203ENST00000587637 TMF1P82094 1093 aa23.6■■□□□ 1.37
SF3A2-203ENST00000587637 SYT17Q9BSW7 474 aa23.6■■□□□ 1.37
SF3A2-203ENST00000587637 PNPLA7Q6ZV29 1317 aa23.59■■□□□ 1.37
SF3A2-203ENST00000587637 NSD3Q9BZ95 1437 aa23.59■■□□□ 1.37
SF3A2-203ENST00000587637 ANKRD26Q9UPS8 1709 aa23.59■■□□□ 1.37
SF3A2-203ENST00000587637 TRIM26Q12899 539 aaPredicted RBP23.58■■□□□ 1.37
SF3A2-203ENST00000587637 ZCRB1Q8TBF4 217 aaKnown RBP23.58■■□□□ 1.37
SF3A2-203ENST00000587637 C5P01031 1676 aa23.57■■□□□ 1.36
SF3A2-203ENST00000587637 HSP90AB2PQ58FF8 381 aa23.57■■□□□ 1.36
SF3A2-203ENST00000587637 CHD4Q14839 1912 aa23.57■■□□□ 1.36
SF3A2-203ENST00000587637 PKD1L3Q7Z443 1732 aa23.56■■□□□ 1.36
SF3A2-203ENST00000587637 ARXQ96QS3 562 aa23.56■■□□□ 1.36
SF3A2-203ENST00000587637 SMG6Q86US8 1419 aaKnown RBP23.56■■□□□ 1.36
SF3A2-203ENST00000587637 ITGB4P16144 1822 aa23.56■■□□□ 1.36
SF3A2-203ENST00000587637 DCAF8L1A6NGE4 600 aa23.55■■□□□ 1.36
SF3A2-203ENST00000587637 KLHL34Q8N239 644 aa23.55■■□□□ 1.36
SF3A2-203ENST00000587637 CARD14Q9BXL6 1004 aa23.55■■□□□ 1.36
SF3A2-203ENST00000587637 TAF1LQ8IZX4 1826 aa23.54■■□□□ 1.36
SF3A2-203ENST00000587637 EMILIN1Q9Y6C2 1016 aa23.54■■□□□ 1.36
SF3A2-203ENST00000587637 FLT4P35916 1363 aa23.53■■□□□ 1.36
SF3A2-203ENST00000587637 GOLGB1Q14789 3259 aaKnown RBP23.53■■□□□ 1.36
SF3A2-203ENST00000587637 SLC27A3Q5K4L6 730 aa23.53■■□□□ 1.36
SF3A2-203ENST00000587637 INSRP06213 1382 aa23.52■■□□□ 1.36
SF3A2-203ENST00000587637 CCNL1Q9UK58 526 aaPredicted RBP23.51■■□□□ 1.35
SF3A2-203ENST00000587637 MAP2P11137 1827 aaKnown RBP23.51■■□□□ 1.35
SF3A2-203ENST00000587637 TFCP2L1Q9NZI6 479 aa23.5■■□□□ 1.35
SF3A2-203ENST00000587637 MAP3K5Q99683 1374 aa23.5■■□□□ 1.35
SF3A2-203ENST00000587637 RAPGEF4Q8WZA2 1011 aa23.49■■□□□ 1.35
SF3A2-203ENST00000587637 TATP17735 454 aaPredicted RBP23.47■■□□□ 1.35
SF3A2-203ENST00000587637 MSL1Q68DK7 614 aa23.47■■□□□ 1.35
SF3A2-203ENST00000587637 NLGN2Q8NFZ4 835 aa23.47■■□□□ 1.35
SF3A2-203ENST00000587637 NCAPD2Q15021 1401 aa23.46■■□□□ 1.35
SF3A2-203ENST00000587637 ZNF784Q8NCA9 323 aaPredicted RBP23.46■■□□□ 1.35
SF3A2-203ENST00000587637 PCDH11XQ9BZA7 1347 aa23.46■■□□□ 1.35
SF3A2-203ENST00000587637 PCDH11YQ9BZA8 1340 aa23.46■■□□□ 1.35
SF3A2-203ENST00000587637 C4BP0C0L5 1744 aa23.45■■□□□ 1.34
SF3A2-203ENST00000587637 CYP27B1O15528 508 aa23.45■■□□□ 1.34
SF3A2-203ENST00000587637 SLC24A1O60721 1099 aa23.45■■□□□ 1.34
SF3A2-203ENST00000587637 PALLDQ8WX93 1383 aa23.44■■□□□ 1.34
SF3A2-203ENST00000587637 PPM1GO15355 546 aaPredicted RBP23.44■■□□□ 1.34
SF3A2-203ENST00000587637 COL23A1Q86Y22 540 aaPredicted RBP23.44■■□□□ 1.34
SF3A2-203ENST00000587637 POLR3GLQ9BT43 218 aa23.44■■□□□ 1.34
SF3A2-203ENST00000587637 AMIGO3Q86WK7 504 aa23.43■■□□□ 1.34
SF3A2-203ENST00000587637 UBR3Q6ZT12 1888 aa23.43■■□□□ 1.34
SF3A2-203ENST00000587637 CGNL1Q0VF96 1302 aa23.42■■□□□ 1.34
SF3A2-203ENST00000587637 MSH5O43196 834 aa23.42■■□□□ 1.34
SF3A2-203ENST00000587637 CDCA8Q53HL2 280 aa23.42■■□□□ 1.34
SF3A2-203ENST00000587637 SMIM5Q71RC9 77 aa23.42■■□□□ 1.34
SF3A2-203ENST00000587637 PELP1Q8IZL8 1130 aaKnown RBP23.42■■□□□ 1.34
SF3A2-203ENST00000587637 KIF24Q5T7B8 1368 aa23.41■■□□□ 1.34
SF3A2-203ENST00000587637 POLD1P28340 1107 aa23.41■■□□□ 1.34
SF3A2-203ENST00000587637 MPRIPQ6WCQ1 1025 aa23.41■■□□□ 1.34
SF3A2-203ENST00000587637 SLC16A10Q8TF71 515 aa23.41■■□□□ 1.34
SF3A2-203ENST00000587637 PCGF6Q9BYE7 350 aa23.4■■□□□ 1.34
SF3A2-203ENST00000587637 GPR162Q16538 588 aa23.38■■□□□ 1.33
SF3A2-203ENST00000587637 TNNT2P45379 298 aaPredicted RBP23.37■■□□□ 1.33
SF3A2-203ENST00000587637 EYA1Q99502 592 aa23.36■■□□□ 1.33
SF3A2-203ENST00000587637 YBX3P16989 372 aaKnown RBP eCLIP23.34■■□□□ 1.332e-14■□□□□ 10.5
SF3A2-203ENST00000587637 PIGBQ92521 554 aa23.34■■□□□ 1.33
SF3A2-203ENST00000587637 POLKQ9UBT6 870 aa23.34■■□□□ 1.33
SF3A2-203ENST00000587637 WASHC2AQ641Q2 1341 aa23.33■■□□□ 1.32
SF3A2-203ENST00000587637 PHF14O94880 888 aa23.32■■□□□ 1.32
SF3A2-203ENST00000587637 EIF4A2Q14240 407 aaKnown RBP23.3■■□□□ 1.32
SF3A2-203ENST00000587637 LINC00116Q8NCU8 138 aa23.3■■□□□ 1.32
SF3A2-203ENST00000587637 HSPA5P11021 654 aaKnown RBP23.29■■□□□ 1.32
SF3A2-203ENST00000587637 AK7Q96M32 723 aa23.28■■□□□ 1.32
SF3A2-203ENST00000587637 WWC3Q9ULE0 1092 aa23.28■■□□□ 1.32
SF3A2-203ENST00000587637 ITPK1Q13572 414 aa23.27■■□□□ 1.32
SF3A2-203ENST00000587637 NKX1-1Q15270 411 aaPredicted RBP23.27■■□□□ 1.32
SF3A2-203ENST00000587637 ASAP1Q9ULH1 1129 aa23.27■■□□□ 1.32
SF3A2-203ENST00000587637 SPG7Q9UQ90 795 aa23.27■■□□□ 1.32
SF3A2-203ENST00000587637 PHKG2P15735 406 aa23.26■■□□□ 1.31
SF3A2-203ENST00000587637 COL5A3P25940 1745 aaPredicted RBP23.25■■□□□ 1.31
SF3A2-203ENST00000587637 LOC102724428A0A0B4J2F2 783 aa23.24■■□□□ 1.31
SF3A2-203ENST00000587637 SIK1P57059 783 aa23.24■■□□□ 1.31
SF3A2-203ENST00000587637 SMARCC1Q92922 1105 aaPredicted RBP23.24■■□□□ 1.31
SF3A2-203ENST00000587637 TMOD3Q9NYL9 352 aa23.24■■□□□ 1.31
SF3A2-203ENST00000587637 KDRP35968 1356 aa23.24■■□□□ 1.31
SF3A2-203ENST00000587637 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.23■■□□□ 1.31
SF3A2-203ENST00000587637 PANK3Q9H999 370 aa23.23■■□□□ 1.31
SF3A2-203ENST00000587637 TIMELESSQ9UNS1 1208 aa23.23■■□□□ 1.31
SF3A2-203ENST00000587637 KDM6AO15550 1401 aaPredicted RBP23.23■■□□□ 1.31
SF3A2-203ENST00000587637 IGSF1Q8N6C5 1336 aa23.22■■□□□ 1.31
SF3A2-203ENST00000587637 CLSPNQ9HAW4 1339 aa23.22■■□□□ 1.31
SF3A2-203ENST00000587637 ATG3Q9NT62 314 aa23.21■■□□□ 1.31
SF3A2-203ENST00000587637 KIAA1551Q9HCM1 1747 aa23.21■■□□□ 1.31
SF3A2-203ENST00000587637 C4AP0C0L4 1744 aa23.2■■□□□ 1.3
SF3A2-203ENST00000587637 AEBP1Q8IUX7 1158 aa23.2■■□□□ 1.3
SF3A2-203ENST00000587637 IFNL2Q8IZJ0 200 aa23.2■■□□□ 1.3
SF3A2-203ENST00000587637 SENP3-EIF4A1A0A087X0R7 540 aa23.19■■□□□ 1.3
SF3A2-203ENST00000587637 GNPATO15228 680 aa23.19■■□□□ 1.3
SF3A2-203ENST00000587637 EIF4G2P78344 907 aaKnown RBP eCLIP23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms