RNA–Protein interactions for RNA: ENST00000587633.1

TRMT1-209, Transcript of tRNA methyltransferase 1, humanhuman

TSL 3

Gene TRMT1, Length 648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT1-209ENST00000587633 ST20-MTHFSA0A0A6YYL1 179 aa24.95■■□□□ 1.58
TRMT1-209ENST00000587633 FBLN1P23142 703 aa24.94■■□□□ 1.58
TRMT1-209ENST00000587633 KCNQ4P56696 695 aa24.94■■□□□ 1.58
TRMT1-209ENST00000587633 QSER1Q2KHR3 1735 aa24.93■■□□□ 1.58
TRMT1-209ENST00000587633 KLHL34Q8N239 644 aa24.92■■□□□ 1.58
TRMT1-209ENST00000587633 CGNL1Q0VF96 1302 aa24.91■■□□□ 1.58
TRMT1-209ENST00000587633 NSD2O96028 1365 aa24.91■■□□□ 1.58
TRMT1-209ENST00000587633 C1QTNF8P60827 252 aa24.9■■□□□ 1.58
TRMT1-209ENST00000587633 CCNL1Q9UK58 526 aaPredicted RBP24.9■■□□□ 1.58
TRMT1-209ENST00000587633 COL24A1Q17RW2 1714 aa24.89■■□□□ 1.58
TRMT1-209ENST00000587633 NBPF6Q5VWK0 638 aa24.89■■□□□ 1.58
TRMT1-209ENST00000587633 NBPF4Q96M43 638 aa24.89■■□□□ 1.58
TRMT1-209ENST00000587633 RTL1A6NKG5 1358 aa24.89■■□□□ 1.57
TRMT1-209ENST00000587633 MEGF6O75095 1541 aa24.87■■□□□ 1.57
TRMT1-209ENST00000587633 LY75O60449 1722 aa24.87■■□□□ 1.57
TRMT1-209ENST00000587633 FYB1O15117 783 aa24.87■■□□□ 1.57
TRMT1-209ENST00000587633 HMGB2P26583 209 aaKnown RBP24.87■■□□□ 1.57
TRMT1-209ENST00000587633 USP47Q96K76 1375 aa24.87■■□□□ 1.57
TRMT1-209ENST00000587633 RRS1Q15050 365 aaKnown RBP24.86■■□□□ 1.57
TRMT1-209ENST00000587633 RAPGEF4Q8WZA2 1011 aa24.86■■□□□ 1.57
TRMT1-209ENST00000587633 PELP1Q8IZL8 1130 aaKnown RBP24.85■■□□□ 1.57
TRMT1-209ENST00000587633 DOT1LQ8TEK3 1739 aa24.85■■□□□ 1.57
TRMT1-209ENST00000587633 SENP3-EIF4A1A0A087X0R7 540 aa24.84■■□□□ 1.57
TRMT1-209ENST00000587633 MSH5O43196 834 aa24.84■■□□□ 1.57
TRMT1-209ENST00000587633 COL23A1Q86Y22 540 aaPredicted RBP24.84■■□□□ 1.57
TRMT1-209ENST00000587633 NLGN2Q8NFZ4 835 aa24.84■■□□□ 1.57
TRMT1-209ENST00000587633 GOLGB1Q14789 3259 aaKnown RBP24.84■■□□□ 1.57
TRMT1-209ENST00000587633 RGPD2P0DJD1 1756 aa24.83■■□□□ 1.57
TRMT1-209ENST00000587633 GGNBP2Q9H3C7 697 aa24.83■■□□□ 1.57
TRMT1-209ENST00000587633 TUBGCP6Q96RT7 1819 aa24.82■■□□□ 1.56
TRMT1-209ENST00000587633 GRIN3BO60391 1043 aa24.82■■□□□ 1.56
TRMT1-209ENST00000587633 TATP17735 454 aaPredicted RBP24.82■■□□□ 1.56
TRMT1-209ENST00000587633 TMF1P82094 1093 aa24.82■■□□□ 1.56
TRMT1-209ENST00000587633 SMG6Q86US8 1419 aaKnown RBP24.82■■□□□ 1.56
TRMT1-209ENST00000587633 SHANK3Q9BYB0 1731 aa24.82■■□□□ 1.56
TRMT1-209ENST00000587633 USHBP1Q8N6Y0 703 aa24.81■■□□□ 1.56
TRMT1-209ENST00000587633 HSP90AB2PQ58FF8 381 aa24.79■■□□□ 1.56
TRMT1-209ENST00000587633 FLAD1Q8NFF5 587 aa24.79■■□□□ 1.56
TRMT1-209ENST00000587633 PCDH11XQ9BZA7 1347 aa24.79■■□□□ 1.56
TRMT1-209ENST00000587633 PCDH11YQ9BZA8 1340 aa24.79■■□□□ 1.56
TRMT1-209ENST00000587633 INSRP06213 1382 aa24.79■■□□□ 1.56
TRMT1-209ENST00000587633 GIGYF1O75420 1035 aaPredicted RBP24.78■■□□□ 1.56
TRMT1-209ENST00000587633 KIF24Q5T7B8 1368 aa24.78■■□□□ 1.56
TRMT1-209ENST00000587633 YBX3P16989 372 aaKnown RBP eCLIP24.76■■□□□ 1.55
TRMT1-209ENST00000587633 CDCA8Q53HL2 280 aa24.76■■□□□ 1.55
TRMT1-209ENST00000587633 FLT4P35916 1363 aa24.75■■□□□ 1.55
TRMT1-209ENST00000587633 MSL1Q68DK7 614 aa24.74■■□□□ 1.55
TRMT1-209ENST00000587633 MPRIPQ6WCQ1 1025 aa24.74■■□□□ 1.55
TRMT1-209ENST00000587633 CD2APQ9Y5K6 639 aa24.74■■□□□ 1.55
TRMT1-209ENST00000587633 PALLDQ8WX93 1383 aa24.73■■□□□ 1.55
TRMT1-209ENST00000587633 CYP27B1O15528 508 aa24.73■■□□□ 1.55
TRMT1-209ENST00000587633 SMARCC1Q92922 1105 aaPredicted RBP24.73■■□□□ 1.55
TRMT1-209ENST00000587633 C5P01031 1676 aa24.69■■□□□ 1.54
TRMT1-209ENST00000587633 NKX1-1Q15270 411 aaPredicted RBP24.67■■□□□ 1.54
TRMT1-209ENST00000587633 AK7Q96M32 723 aa24.67■■□□□ 1.54
TRMT1-209ENST00000587633 CARD14Q9BXL6 1004 aa24.67■■□□□ 1.54
TRMT1-209ENST00000587633 PIGBQ92521 554 aa24.66■■□□□ 1.54
TRMT1-209ENST00000587633 EMILIN1Q9Y6C2 1016 aa24.66■■□□□ 1.54
TRMT1-209ENST00000587633 SPG7Q9UQ90 795 aa24.65■■□□□ 1.54
TRMT1-209ENST00000587633 TAF1LQ8IZX4 1826 aa24.64■■□□□ 1.54
TRMT1-209ENST00000587633 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.63■■□□□ 1.535e-6■■■■□ 22.9
TRMT1-209ENST00000587633 KIF20BQ96Q89 1820 aa24.63■■□□□ 1.53
TRMT1-209ENST00000587633 NSD3Q9BZ95 1437 aa24.62■■□□□ 1.53
TRMT1-209ENST00000587633 PPM1GO15355 546 aaPredicted RBP24.62■■□□□ 1.53
TRMT1-209ENST00000587633 WASHC2AQ641Q2 1341 aa24.61■■□□□ 1.53
TRMT1-209ENST00000587633 NCAPD2Q15021 1401 aa24.61■■□□□ 1.53
TRMT1-209ENST00000587633 C4BP0C0L5 1744 aa24.61■■□□□ 1.53
TRMT1-209ENST00000587633 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.61■■□□□ 1.53
TRMT1-209ENST00000587633 AMIGO3Q86WK7 504 aa24.61■■□□□ 1.53
TRMT1-209ENST00000587633 ITGB4P16144 1822 aa24.61■■□□□ 1.53
TRMT1-209ENST00000587633 LOC102724428A0A0B4J2F2 783 aa24.6■■□□□ 1.53
TRMT1-209ENST00000587633 SSFA2P28290 1259 aa24.6■■□□□ 1.53
TRMT1-209ENST00000587633 SIK1P57059 783 aa24.6■■□□□ 1.53
TRMT1-209ENST00000587633 ATP10DQ9P241 1426 aa24.6■■□□□ 1.53
TRMT1-209ENST00000587633 PHF14O94880 888 aa24.59■■□□□ 1.53
TRMT1-209ENST00000587633 PKD1L3Q7Z443 1732 aa24.58■■□□□ 1.53
TRMT1-209ENST00000587633 CEP350Q5VT06 3117 aa24.58■■□□□ 1.53
TRMT1-209ENST00000587633 EYA1Q99502 592 aa24.58■■□□□ 1.53
TRMT1-209ENST00000587633 GPBP1L1Q9HC44 474 aaPredicted RBP24.58■■□□□ 1.53
TRMT1-209ENST00000587633 TMOD3Q9NYL9 352 aa24.58■■□□□ 1.53
TRMT1-209ENST00000587633 TOGARAM1Q9Y4F4 1720 aa24.58■■□□□ 1.52
TRMT1-209ENST00000587633 SMIM5Q71RC9 77 aa24.56■■□□□ 1.52
TRMT1-209ENST00000587633 IFNL2Q8IZJ0 200 aa24.56■■□□□ 1.52
TRMT1-209ENST00000587633 LINC00116Q8NCU8 138 aa24.56■■□□□ 1.52
TRMT1-209ENST00000587633 ASAP1Q9ULH1 1129 aa24.55■■□□□ 1.52
TRMT1-209ENST00000587633 UBR3Q6ZT12 1888 aa24.55■■□□□ 1.52
TRMT1-209ENST00000587633 IGSF1Q8N6C5 1336 aa24.55■■□□□ 1.52
TRMT1-209ENST00000587633 POLKQ9UBT6 870 aa24.54■■□□□ 1.52
TRMT1-209ENST00000587633 ADCY9O60503 1353 aa24.54■■□□□ 1.52
TRMT1-209ENST00000587633 PHKG2P15735 406 aa24.53■■□□□ 1.52
TRMT1-209ENST00000587633 ATP6V1AP38606 617 aa24.53■■□□□ 1.52
TRMT1-209ENST00000587633 MAP2P11137 1827 aaKnown RBP24.53■■□□□ 1.52
TRMT1-209ENST00000587633 GNPATO15228 680 aa24.52■■□□□ 1.52
TRMT1-209ENST00000587633 ITPK1Q13572 414 aa24.52■■□□□ 1.52
TRMT1-209ENST00000587633 ANKRD26Q9UPS8 1709 aa24.5■■□□□ 1.51
TRMT1-209ENST00000587633 ATG3Q9NT62 314 aa24.5■■□□□ 1.51
TRMT1-209ENST00000587633 TIMELESSQ9UNS1 1208 aa24.5■■□□□ 1.51
TRMT1-209ENST00000587633 PLEKHG2Q9H7P9 1386 aa24.49■■□□□ 1.51
TRMT1-209ENST00000587633 ZNF526Q8TF50 670 aaPredicted RBP24.47■■□□□ 1.51
TRMT1-209ENST00000587633 WWC3Q9ULE0 1092 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms