RNA–Protein interactions for RNA: ENST00000586835.1

TMED1-202, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 2

Gene TMED1, Length 713 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-202ENST00000586835 FAM208AQ9UK61 1670 aaKnown RBP18.48■□□□□ 0.55
TMED1-202ENST00000586835 IL13P35225 146 aa18.48■□□□□ 0.55
TMED1-202ENST00000586835 EXOC5O00471 708 aa18.47■□□□□ 0.55
TMED1-202ENST00000586835 FCHSD2O94868 740 aa18.47■□□□□ 0.55
TMED1-202ENST00000586835 IL2RBP14784 551 aa18.47■□□□□ 0.55
TMED1-202ENST00000586835 HSP90AB2PQ58FF8 381 aa18.47■□□□□ 0.55
TMED1-202ENST00000586835 DEFB132Q7Z7B7 95 aa18.47■□□□□ 0.55
TMED1-202ENST00000586835 MARCH10Q8NA82 808 aaPredicted RBP18.46■□□□□ 0.55
TMED1-202ENST00000586835 RUNDC1Q96C34 613 aa18.46■□□□□ 0.55
TMED1-202ENST00000586835 RGPD1P0DJD0 1748 aa18.46■□□□□ 0.55
TMED1-202ENST00000586835 TRIM37O94972 964 aa18.45■□□□□ 0.54
TMED1-202ENST00000586835 OVOS2A0A0G2JMS6 1433 aa18.45■□□□□ 0.54
TMED1-202ENST00000586835 PPM1GO15355 546 aaPredicted RBP18.44■□□□□ 0.54
TMED1-202ENST00000586835 U2AF1L5P0DN76 240 aaPredicted RBP18.44■□□□□ 0.54
TMED1-202ENST00000586835 BAG6P46379 1132 aa18.44■□□□□ 0.54
TMED1-202ENST00000586835 U2AF1Q01081 240 aaKnown RBP eCLIP18.44■□□□□ 0.54
TMED1-202ENST00000586835 NBPF6Q5VWK0 638 aa18.44■□□□□ 0.54
TMED1-202ENST00000586835 NBPF4Q96M43 638 aa18.44■□□□□ 0.54
TMED1-202ENST00000586835 RGPD2P0DJD1 1756 aa18.44■□□□□ 0.54
TMED1-202ENST00000586835 TNS2Q63HR2 1409 aa18.43■□□□□ 0.54
TMED1-202ENST00000586835 TNS1Q9HBL0 1735 aaKnown RBP18.43■□□□□ 0.54
TMED1-202ENST00000586835 BCL9O00512 1426 aa18.42■□□□□ 0.54
TMED1-202ENST00000586835 EIF4A2Q14240 407 aaKnown RBP18.41■□□□□ 0.54
TMED1-202ENST00000586835 U2SURPO15042 1029 aaKnown RBP18.4■□□□□ 0.54
TMED1-202ENST00000586835 EN1Q05925 392 aaPredicted RBP18.4■□□□□ 0.54
TMED1-202ENST00000586835 CCDC27Q2M243 656 aa18.4■□□□□ 0.54
TMED1-202ENST00000586835 PLEKHF1Q96S99 279 aa18.4■□□□□ 0.54
TMED1-202ENST00000586835 APBA3O96018 575 aa18.39■□□□□ 0.53
TMED1-202ENST00000586835 SBF2Q86WG5 1849 aa18.39■□□□□ 0.53
TMED1-202ENST00000586835 KDRP35968 1356 aa18.39■□□□□ 0.53
TMED1-202ENST00000586835 USHBP1Q8N6Y0 703 aa18.38■□□□□ 0.53
TMED1-202ENST00000586835 RSPH6AQ9H0K4 717 aa18.38■□□□□ 0.53
TMED1-202ENST00000586835 NEFMP07197 916 aa18.37■□□□□ 0.53
TMED1-202ENST00000586835 ZNF521Q96K83 1311 aa18.37■□□□□ 0.53
TMED1-202ENST00000586835 MEGF6O75095 1541 aa18.37■□□□□ 0.53
TMED1-202ENST00000586835 APAF1O14727 1248 aa18.36■□□□□ 0.53
TMED1-202ENST00000586835 IGSF1Q8N6C5 1336 aa18.36■□□□□ 0.53
TMED1-202ENST00000586835 CAMKK2Q96RR4 588 aa18.36■□□□□ 0.53
TMED1-202ENST00000586835 BCL11BQ9C0K0 894 aaPredicted RBP18.36■□□□□ 0.53
TMED1-202ENST00000586835 NCAPD2Q15021 1401 aa18.35■□□□□ 0.53
TMED1-202ENST00000586835 PLEKHG2Q9H7P9 1386 aa18.35■□□□□ 0.53
TMED1-202ENST00000586835 MAPK8IP3Q9UPT6 1336 aa18.35■□□□□ 0.53
TMED1-202ENST00000586835 PTF1AQ7RTS3 328 aa18.35■□□□□ 0.53
TMED1-202ENST00000586835 RAPGEF4Q8WZA2 1011 aa18.35■□□□□ 0.53
TMED1-202ENST00000586835 EZH2Q15910 746 aaKnown RBP18.34■□□□□ 0.53
TMED1-202ENST00000586835 ZCRB1Q8TBF4 217 aaKnown RBP18.34■□□□□ 0.53
TMED1-202ENST00000586835 DDX54Q8TDD1 881 aaKnown RBP18.34■□□□□ 0.53
TMED1-202ENST00000586835 EYA1Q99502 592 aa18.34■□□□□ 0.53
TMED1-202ENST00000586835 TATP17735 454 aaPredicted RBP18.33■□□□□ 0.52
TMED1-202ENST00000586835 CCDC146Q8IYE0 955 aa18.33■□□□□ 0.52
TMED1-202ENST00000586835 PLSCR1O15162 318 aa18.31■□□□□ 0.52
TMED1-202ENST00000586835 KCNQ2O43526 872 aa18.31■□□□□ 0.52
TMED1-202ENST00000586835 PRKAR2BP31323 418 aa18.31■□□□□ 0.52
TMED1-202ENST00000586835 WDR63Q8IWG1 891 aa18.31■□□□□ 0.52
TMED1-202ENST00000586835 SHANK3Q9BYB0 1731 aa18.3■□□□□ 0.52
TMED1-202ENST00000586835 TMPOP42166 694 aaKnown RBP18.3■□□□□ 0.52
TMED1-202ENST00000586835 GOLGA2Q08379 1002 aa18.29■□□□□ 0.52
TMED1-202ENST00000586835 SULT6B1Q6IMI4 303 aa18.29■□□□□ 0.52
TMED1-202ENST00000586835 WWC1Q8IX03 1113 aa18.29■□□□□ 0.52
TMED1-202ENST00000586835 ACSBG1Q96GR2 724 aa18.29■□□□□ 0.52
TMED1-202ENST00000586835 NHSQ6T4R5 1651 aa18.28■□□□□ 0.52
TMED1-202ENST00000586835 LMOD3Q0VAK6 560 aa18.28■□□□□ 0.52
TMED1-202ENST00000586835 NFE2L2Q16236 605 aa18.28■□□□□ 0.52
TMED1-202ENST00000586835 KAT6BQ8WYB5 2073 aa18.27■□□□□ 0.52
TMED1-202ENST00000586835 IL16Q14005 1332 aa18.27■□□□□ 0.52
TMED1-202ENST00000586835 HMOX1P09601 288 aa18.27■□□□□ 0.52
TMED1-202ENST00000586835 RREB1Q92766 1687 aa18.27■□□□□ 0.52
TMED1-202ENST00000586835 RGPD3A6NKT7 1758 aaPredicted RBP18.27■□□□□ 0.51
TMED1-202ENST00000586835 RGPD4Q7Z3J3 1758 aa18.27■□□□□ 0.51
TMED1-202ENST00000586835 PCDH11XQ9BZA7 1347 aa18.26■□□□□ 0.51
TMED1-202ENST00000586835 PCDH11YQ9BZA8 1340 aa18.26■□□□□ 0.51
TMED1-202ENST00000586835 E9PSI1 815 aa18.26■□□□□ 0.51
TMED1-202ENST00000586835 TRMT2AQ8IZ69 625 aaKnown RBP18.26■□□□□ 0.51
TMED1-202ENST00000586835 CALD1Q05682 793 aaKnown RBP18.25■□□□□ 0.51
TMED1-202ENST00000586835 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.25■□□□□ 0.51
TMED1-202ENST00000586835 PKD1L3Q7Z443 1732 aa18.25■□□□□ 0.51
TMED1-202ENST00000586835 DLG5Q8TDM6 1919 aa18.25■□□□□ 0.51
TMED1-202ENST00000586835 CYP27B1O15528 508 aa18.24■□□□□ 0.51
TMED1-202ENST00000586835 HTATSF1O43719 755 aaKnown RBP18.24■□□□□ 0.51
TMED1-202ENST00000586835 SLFN5Q08AF3 891 aa18.24■□□□□ 0.51
TMED1-202ENST00000586835 PROM2Q8N271 834 aa18.24■□□□□ 0.51
TMED1-202ENST00000586835 SPG7Q9UQ90 795 aa18.24■□□□□ 0.51
TMED1-202ENST00000586835 NUP188Q5SRE5 1749 aa18.23■□□□□ 0.51
TMED1-202ENST00000586835 PRIM1P49642 420 aaKnown RBP18.23■□□□□ 0.51
TMED1-202ENST00000586835 RIPK4P57078 832 aa18.23■□□□□ 0.51
TMED1-202ENST00000586835 AEBP1Q8IUX7 1158 aa18.23■□□□□ 0.51
TMED1-202ENST00000586835 GAS2L2Q8NHY3 880 aa18.23■□□□□ 0.51
TMED1-202ENST00000586835 PHACTR3Q96KR7 559 aa18.23■□□□□ 0.51
TMED1-202ENST00000586835 BTAF1O14981 1849 aa18.22■□□□□ 0.51
TMED1-202ENST00000586835 TRIM35Q9UPQ4 493 aa18.22■□□□□ 0.51
TMED1-202ENST00000586835 DOT1LQ8TEK3 1739 aa18.21■□□□□ 0.51
TMED1-202ENST00000586835 PSDA5PKW4 1024 aaPredicted RBP18.21■□□□□ 0.51
TMED1-202ENST00000586835 TXNRD1Q16881 649 aa18.21■□□□□ 0.51
TMED1-202ENST00000586835 SALL2Q9Y467 1007 aaPredicted RBP18.21■□□□□ 0.51
TMED1-202ENST00000586835 R3HDM1Q15032 1099 aaKnown RBP18.2■□□□□ 0.5
TMED1-202ENST00000586835 NKX1-1Q15270 411 aaPredicted RBP18.2■□□□□ 0.5
TMED1-202ENST00000586835 AMOTQ4VCS5 1084 aa18.2■□□□□ 0.5
TMED1-202ENST00000586835 NBPF14Q5TI25 921 aa18.2■□□□□ 0.5
TMED1-202ENST00000586835 SYTL4Q96C24 671 aaPredicted RBP18.2■□□□□ 0.5
TMED1-202ENST00000586835 DUSP27Q5VZP5 1158 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms