RNA–Protein interactions for RNA: ENST00000586538.1

ACTN4-209, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-209ENST00000586538 ANKRD26Q9UPS8 1709 aa15.48■□□□□ 0.07
ACTN4-209ENST00000586538 MEGF6O75095 1541 aa15.48■□□□□ 0.07
ACTN4-209ENST00000586538 RGPD2P0DJD1 1756 aa15.47■□□□□ 0.07
ACTN4-209ENST00000586538 HSPA5P11021 654 aaKnown RBP15.47■□□□□ 0.07
ACTN4-209ENST00000586538 FBLN1P23142 703 aa15.47■□□□□ 0.07
ACTN4-209ENST00000586538 NBPF6Q5VWK0 638 aa15.47■□□□□ 0.07
ACTN4-209ENST00000586538 PTF1AQ7RTS3 328 aa15.47■□□□□ 0.07
ACTN4-209ENST00000586538 PROM2Q8N271 834 aa15.47■□□□□ 0.07
ACTN4-209ENST00000586538 SYTL4Q96C24 671 aaPredicted RBP15.47■□□□□ 0.07
ACTN4-209ENST00000586538 NBPF4Q96M43 638 aa15.47■□□□□ 0.07
ACTN4-209ENST00000586538 ANO8Q9HCE9 1232 aaPredicted RBP15.47■□□□□ 0.07
ACTN4-209ENST00000586538 CASZ1Q86V15 1759 aa15.47■□□□□ 0.07
ACTN4-209ENST00000586538 DOT1LQ8TEK3 1739 aa15.46■□□□□ 0.07
ACTN4-209ENST00000586538 HSP90AB2PQ58FF8 381 aa15.46■□□□□ 0.07
ACTN4-209ENST00000586538 PLEKHG2Q9H7P9 1386 aa15.46■□□□□ 0.07
ACTN4-209ENST00000586538 PPM1GO15355 546 aaPredicted RBP15.45■□□□□ 0.06
ACTN4-209ENST00000586538 SHANK3Q9BYB0 1731 aa15.45■□□□□ 0.06
ACTN4-209ENST00000586538 WASHC2AQ641Q2 1341 aa15.44■□□□□ 0.06
ACTN4-209ENST00000586538 MTFR1LQ9H019 292 aa15.44■□□□□ 0.06
ACTN4-209ENST00000586538 EMILIN1Q9Y6C2 1016 aa15.44■□□□□ 0.06
ACTN4-209ENST00000586538 PAPPAQ13219 1627 aa15.43■□□□□ 0.06
ACTN4-209ENST00000586538 MAP2P11137 1827 aaKnown RBP15.43■□□□□ 0.06
ACTN4-209ENST00000586538 PRIM1P49642 420 aaKnown RBP15.42■□□□□ 0.06
ACTN4-209ENST00000586538 USHBP1Q8N6Y0 703 aa15.42■□□□□ 0.06
ACTN4-209ENST00000586538 SPG7Q9UQ90 795 aa15.42■□□□□ 0.06
ACTN4-209ENST00000586538 NCAPD2Q15021 1401 aa15.41■□□□□ 0.06
ACTN4-209ENST00000586538 QSER1Q2KHR3 1735 aa15.4■□□□□ 0.06
ACTN4-209ENST00000586538 PKD1L3Q7Z443 1732 aa15.4■□□□□ 0.06
ACTN4-209ENST00000586538 SLC16A10Q8TF71 515 aa15.4■□□□□ 0.06
ACTN4-209ENST00000586538 PANK3Q9H999 370 aa15.4■□□□□ 0.06
ACTN4-209ENST00000586538 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.4■□□□□ 0.06
ACTN4-209ENST00000586538 KNSTRNQ9Y448 316 aa15.4■□□□□ 0.06
ACTN4-209ENST00000586538 LY75O60449 1722 aa15.4■□□□□ 0.06
ACTN4-209ENST00000586538 ZBTB7AO95365 584 aa15.39■□□□□ 0.05
ACTN4-209ENST00000586538 POLKQ9UBT6 870 aa15.39■□□□□ 0.05
ACTN4-209ENST00000586538 SMARCC1Q92922 1105 aaPredicted RBP15.38■□□□□ 0.05
ACTN4-209ENST00000586538 CCNL1Q9UK58 526 aaPredicted RBP15.38■□□□□ 0.05
ACTN4-209ENST00000586538 TFCP2L1Q9NZI6 479 aa15.37■□□□□ 0.05
ACTN4-209ENST00000586538 POLD1P28340 1107 aa15.36■□□□□ 0.05
ACTN4-209ENST00000586538 TNNT2P45379 298 aaPredicted RBP15.36■□□□□ 0.05
ACTN4-209ENST00000586538 MORC1Q86VD1 984 aa15.36■□□□□ 0.05
ACTN4-209ENST00000586538 AKT1S1Q96B36 256 aa15.36■□□□□ 0.05
ACTN4-209ENST00000586538 EYA1Q99502 592 aa15.36■□□□□ 0.05
ACTN4-209ENST00000586538 LRRC4BQ9NT99 713 aa15.36■□□□□ 0.05
ACTN4-209ENST00000586538 ATF5Q9Y2D1 282 aaPredicted RBP15.36■□□□□ 0.05
ACTN4-209ENST00000586538 ZNF827Q17R98 1081 aa15.35■□□□□ 0.05
ACTN4-209ENST00000586538 IFNL2Q8IZJ0 200 aa15.35■□□□□ 0.05
ACTN4-209ENST00000586538 HSP90AB1P08238 724 aaKnown RBP15.34■□□□□ 0.05
ACTN4-209ENST00000586538 PTGER2P43116 358 aa15.34■□□□□ 0.05
ACTN4-209ENST00000586538 EIF4A2Q14240 407 aaKnown RBP15.34■□□□□ 0.05
ACTN4-209ENST00000586538 NKX1-1Q15270 411 aaPredicted RBP15.34■□□□□ 0.05
ACTN4-209ENST00000586538 FLAD1Q8NFF5 587 aa15.34■□□□□ 0.05
ACTN4-209ENST00000586538 PALLDQ8WX93 1383 aa15.34■□□□□ 0.05
ACTN4-209ENST00000586538 CYP27B1O15528 508 aa15.33■□□□□ 0.04
ACTN4-209ENST00000586538 MPRIPQ6WCQ1 1025 aa15.33■□□□□ 0.04
ACTN4-209ENST00000586538 PDGFDQ9GZP0 370 aaPredicted RBP15.33■□□□□ 0.04
ACTN4-209ENST00000586538 IGSF1Q8N6C5 1336 aa15.33■□□□□ 0.04
ACTN4-209ENST00000586538 C5P01031 1676 aa15.32■□□□□ 0.04
ACTN4-209ENST00000586538 AMOTQ4VCS5 1084 aa15.32■□□□□ 0.04
ACTN4-209ENST00000586538 ARXQ96QS3 562 aa15.32■□□□□ 0.04
ACTN4-209ENST00000586538 TMOD3Q9NYL9 352 aa15.32■□□□□ 0.04
ACTN4-209ENST00000586538 MAP3K5Q99683 1374 aa15.32■□□□□ 0.04
ACTN4-209ENST00000586538 PNPLA7Q6ZV29 1317 aa15.31■□□□□ 0.04
ACTN4-209ENST00000586538 ITGB4P16144 1822 aa15.31■□□□□ 0.04
ACTN4-209ENST00000586538 KIF7Q2M1P5 1343 aa15.3■□□□□ 0.04
ACTN4-209ENST00000586538 PLEKHO1Q53GL0 409 aaPredicted RBP15.3■□□□□ 0.04
ACTN4-209ENST00000586538 SGIP1Q9BQI5 828 aa15.3■□□□□ 0.04
ACTN4-209ENST00000586538 TOGARAM1Q9Y4F4 1720 aa15.29■□□□□ 0.04
ACTN4-209ENST00000586538 PHKG2P15735 406 aa15.29■□□□□ 0.04
ACTN4-209ENST00000586538 SYT17Q9BSW7 474 aa15.29■□□□□ 0.04
ACTN4-209ENST00000586538 FHDC1Q9C0D6 1143 aaPredicted RBP15.29■□□□□ 0.04
ACTN4-209ENST00000586538 MSH5O43196 834 aa15.28■□□□□ 0.04
ACTN4-209ENST00000586538 AK7Q96M32 723 aa15.28■□□□□ 0.04
ACTN4-209ENST00000586538 TUBGCP6Q96RT7 1819 aa15.27■□□□□ 0.04
ACTN4-209ENST00000586538 COL24A1Q17RW2 1714 aa15.27■□□□□ 0.04
ACTN4-209ENST00000586538 YY1P25490 414 aa15.27■□□□□ 0.04
ACTN4-209ENST00000586538 C1orf141Q5JVX7 400 aa15.27■□□□□ 0.04
ACTN4-209ENST00000586538 DCAF5Q96JK2 942 aa15.27■□□□□ 0.04
ACTN4-209ENST00000586538 TAF1LQ8IZX4 1826 aa15.27■□□□□ 0.03
ACTN4-209ENST00000586538 ERVV-2B6SEH9 535 aa15.26■□□□□ 0.03
ACTN4-209ENST00000586538 PIGBQ92521 554 aa15.26■□□□□ 0.03
ACTN4-209ENST00000586538 C4BP0C0L5 1744 aa15.26■□□□□ 0.03
ACTN4-209ENST00000586538 KCNQ4P56696 695 aa15.25■□□□□ 0.03
ACTN4-209ENST00000586538 AMER1Q5JTC6 1135 aaPredicted RBP15.25■□□□□ 0.03
ACTN4-209ENST00000586538 NPC1L1Q9UHC9 1359 aa15.24■□□□□ 0.03
ACTN4-209ENST00000586538 LOC102724428A0A0B4J2F2 783 aa15.24■□□□□ 0.03
ACTN4-209ENST00000586538 SIK1P57059 783 aa15.24■□□□□ 0.03
ACTN4-209ENST00000586538 ZNF530Q6P9A1 599 aaPredicted RBP15.24■□□□□ 0.03
ACTN4-209ENST00000586538 KDRP35968 1356 aa15.24■□□□□ 0.03
ACTN4-209ENST00000586538 SSFA2P28290 1259 aa15.23■□□□□ 0.03
ACTN4-209ENST00000586538 ATP6V1AP38606 617 aa15.22■□□□□ 0.03
ACTN4-209ENST00000586538 CABP4P57796 275 aa15.22■□□□□ 0.03
ACTN4-209ENST00000586538 SULT6B1Q6IMI4 303 aa15.22■□□□□ 0.03
ACTN4-209ENST00000586538 COL23A1Q86Y22 540 aaPredicted RBP15.22■□□□□ 0.03
ACTN4-209ENST00000586538 KLHL34Q8N239 644 aa15.22■□□□□ 0.03
ACTN4-209ENST00000586538 ZNF831Q5JPB2 1677 aa15.22■□□□□ 0.03
ACTN4-209ENST00000586538 IL13P35225 146 aa15.21■□□□□ 0.03
ACTN4-209ENST00000586538 MTHFSP49914 203 aa15.21■□□□□ 0.03
ACTN4-209ENST00000586538 UBR3Q6ZT12 1888 aa15.19■□□□□ 0.02
ACTN4-209ENST00000586538 PER1O15534 1290 aaPredicted RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms