RNA–Protein interactions for RNA: ENST00000585920.1

DNMT1-205, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-205ENST00000585920 ONECUT3O60422 494 aaPredicted RBP17.59■□□□□ 0.41
DNMT1-205ENST00000585920 DIAPH1O60610 1272 aaKnown RBP17.59■□□□□ 0.41
DNMT1-205ENST00000585920 IL13P35225 146 aa17.58■□□□□ 0.4
DNMT1-205ENST00000585920 SEPT12Q8IYM1 358 aa17.58■□□□□ 0.4
DNMT1-205ENST00000585920 EYA1Q99502 592 aa17.58■□□□□ 0.4
DNMT1-205ENST00000585920 RGPD5Q99666 1765 aa17.58■□□□□ 0.4
DNMT1-205ENST00000585920 USHBP1Q8N6Y0 703 aa17.57■□□□□ 0.4
DNMT1-205ENST00000585920 CDCA7Q9BWT1 371 aaPredicted RBP17.57■□□□□ 0.4
DNMT1-205ENST00000585920 IFNLR1Q8IU57 520 aaPredicted RBP17.56■□□□□ 0.4
DNMT1-205ENST00000585920 GLI3P10071 1580 aa17.55■□□□□ 0.4
DNMT1-205ENST00000585920 IL2RBP14784 551 aa17.55■□□□□ 0.4
DNMT1-205ENST00000585920 NUDCQ9Y266 331 aa17.55■□□□□ 0.4
DNMT1-205ENST00000585920 U2SURPO15042 1029 aaKnown RBP17.54■□□□□ 0.4
DNMT1-205ENST00000585920 RAPGEF4Q8WZA2 1011 aa17.54■□□□□ 0.4
DNMT1-205ENST00000585920 EXOC5O00471 708 aa17.53■□□□□ 0.4
DNMT1-205ENST00000585920 TATP17735 454 aaPredicted RBP17.52■□□□□ 0.4
DNMT1-205ENST00000585920 PDE3BQ13370 1112 aa17.52■□□□□ 0.4
DNMT1-205ENST00000585920 DDB1Q16531 1140 aa17.52■□□□□ 0.4
DNMT1-205ENST00000585920 DIEXFQ68CQ4 756 aaKnown RBP17.52■□□□□ 0.4
DNMT1-205ENST00000585920 SULT6B1Q6IMI4 303 aa17.52■□□□□ 0.4
DNMT1-205ENST00000585920 IGSF1Q8N6C5 1336 aa17.51■□□□□ 0.39
DNMT1-205ENST00000585920 RGS12O14924 1447 aa17.51■□□□□ 0.39
DNMT1-205ENST00000585920 ILDR2Q71H61 639 aa17.51■□□□□ 0.39
DNMT1-205ENST00000585920 KRT27Q7Z3Y8 459 aa17.5■□□□□ 0.39
DNMT1-205ENST00000585920 FAM208AQ9UK61 1670 aaKnown RBP17.49■□□□□ 0.39
DNMT1-205ENST00000585920 SPDYE2BA6NHP3 402 aa17.49■□□□□ 0.39
DNMT1-205ENST00000585920 HMOX1P09601 288 aa17.49■□□□□ 0.39
DNMT1-205ENST00000585920 SPDYE6P0CI01 402 aa17.49■□□□□ 0.39
DNMT1-205ENST00000585920 U2AF1L5P0DN76 240 aaPredicted RBP17.49■□□□□ 0.39
DNMT1-205ENST00000585920 U2AF1Q01081 240 aaKnown RBP eCLIP17.49■□□□□ 0.39
DNMT1-205ENST00000585920 SPDYE2Q495Y8 402 aa17.49■□□□□ 0.39
DNMT1-205ENST00000585920 DISP2A7MBM2 1401 aa17.48■□□□□ 0.39
DNMT1-205ENST00000585920 AEBP1Q8IUX7 1158 aa17.48■□□□□ 0.39
DNMT1-205ENST00000585920 ZCRB1Q8TBF4 217 aaKnown RBP17.48■□□□□ 0.39
DNMT1-205ENST00000585920 COL3A1P02461 1466 aaPredicted RBP17.48■□□□□ 0.39
DNMT1-205ENST00000585920 SSUH2Q9Y2M2 353 aa17.47■□□□□ 0.39
DNMT1-205ENST00000585920 DDX54Q8TDD1 881 aaKnown RBP17.46■□□□□ 0.39
DNMT1-205ENST00000585920 NCAPD2Q15021 1401 aa17.46■□□□□ 0.39
DNMT1-205ENST00000585920 SPG7Q9UQ90 795 aa17.45■□□□□ 0.38
DNMT1-205ENST00000585920 RGPD2P0DJD1 1756 aa17.44■□□□□ 0.38
DNMT1-205ENST00000585920 MEGF6O75095 1541 aa17.44■□□□□ 0.38
DNMT1-205ENST00000585920 PLEKHO1Q53GL0 409 aaPredicted RBP17.44■□□□□ 0.38
DNMT1-205ENST00000585920 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.44■□□□□ 0.38
DNMT1-205ENST00000585920 KDRP35968 1356 aa17.43■□□□□ 0.38
DNMT1-205ENST00000585920 THSD7AQ9UPZ6 1657 aa17.43■□□□□ 0.38
DNMT1-205ENST00000585920 FCHSD2O94868 740 aa17.43■□□□□ 0.38
DNMT1-205ENST00000585920 WDR43Q15061 677 aaKnown RBP eCLIP17.43■□□□□ 0.38
DNMT1-205ENST00000585920 AMOTQ4VCS5 1084 aa17.43■□□□□ 0.38
DNMT1-205ENST00000585920 FAM182BQ5T319 152 aa17.43■□□□□ 0.38
DNMT1-205ENST00000585920 OVOS2A0A0G2JMS6 1433 aa17.43■□□□□ 0.38
DNMT1-205ENST00000585920 CCDC184Q52MB2 194 aa17.42■□□□□ 0.38
DNMT1-205ENST00000585920 MARCH10Q8NA82 808 aaPredicted RBP17.42■□□□□ 0.38
DNMT1-205ENST00000585920 PNNQ9H307 717 aaKnown RBP17.42■□□□□ 0.38
DNMT1-205ENST00000585920 MRS2Q9HD23 443 aa17.42■□□□□ 0.38
DNMT1-205ENST00000585920 TNS2Q63HR2 1409 aa17.41■□□□□ 0.38
DNMT1-205ENST00000585920 PRKAR2BP31323 418 aa17.41■□□□□ 0.38
DNMT1-205ENST00000585920 FAM196AQ6ZSG2 479 aa17.41■□□□□ 0.38
DNMT1-205ENST00000585920 NEFMP07197 916 aa17.4■□□□□ 0.38
DNMT1-205ENST00000585920 RSPH6AQ9H0K4 717 aa17.4■□□□□ 0.38
DNMT1-205ENST00000585920 PCDH11XQ9BZA7 1347 aa17.4■□□□□ 0.38
DNMT1-205ENST00000585920 PCDH11YQ9BZA8 1340 aa17.4■□□□□ 0.38
DNMT1-205ENST00000585920 PLEKHG2Q9H7P9 1386 aa17.39■□□□□ 0.37
DNMT1-205ENST00000585920 RGPD1P0DJD0 1748 aa17.38■□□□□ 0.37
DNMT1-205ENST00000585920 PARP4Q9UKK3 1724 aaKnown RBP17.38■□□□□ 0.37
DNMT1-205ENST00000585920 IFNL2Q8IZJ0 200 aa17.38■□□□□ 0.37
DNMT1-205ENST00000585920 CYP27B1O15528 508 aa17.37■□□□□ 0.37
DNMT1-205ENST00000585920 C1orf141Q5JVX7 400 aa17.37■□□□□ 0.37
DNMT1-205ENST00000585920 ZNF530Q6P9A1 599 aaPredicted RBP17.37■□□□□ 0.37
DNMT1-205ENST00000585920 ADAMTS8Q9UP79 889 aa17.37■□□□□ 0.37
DNMT1-205ENST00000585920 LRRC37A3O60309 1634 aa17.36■□□□□ 0.37
DNMT1-205ENST00000585920 PHKG2P15735 406 aa17.36■□□□□ 0.37
DNMT1-205ENST00000585920 MTHFSDQ2M296 383 aaKnown RBP17.36■□□□□ 0.37
DNMT1-205ENST00000585920 PHACTR3Q96KR7 559 aa17.36■□□□□ 0.37
DNMT1-205ENST00000585920 WNK3Q9BYP7 1800 aa17.35■□□□□ 0.37
DNMT1-205ENST00000585920 MIER1Q8N108 512 aa17.35■□□□□ 0.37
DNMT1-205ENST00000585920 GAS2L2Q8NHY3 880 aa17.35■□□□□ 0.37
DNMT1-205ENST00000585920 PNISRQ8TF01 805 aaKnown RBP17.35■□□□□ 0.37
DNMT1-205ENST00000585920 BRWD3Q6RI45 1802 aa17.35■□□□□ 0.37
DNMT1-205ENST00000585920 CCER2I3L3R5 266 aa17.34■□□□□ 0.37
DNMT1-205ENST00000585920 HSP90AB1P08238 724 aaKnown RBP17.34■□□□□ 0.37
DNMT1-205ENST00000585920 MAPK8IP3Q9UPT6 1336 aa17.34■□□□□ 0.37
DNMT1-205ENST00000585920 NKX1-1Q15270 411 aaPredicted RBP17.33■□□□□ 0.36
DNMT1-205ENST00000585920 AKAP4Q5JQC9 854 aa17.33■□□□□ 0.36
DNMT1-205ENST00000585920 ACSBG1Q96GR2 724 aa17.33■□□□□ 0.36
DNMT1-205ENST00000585920 PLEKHF1Q96S99 279 aa17.33■□□□□ 0.36
DNMT1-205ENST00000585920 TRIM37O94972 964 aa17.32■□□□□ 0.36
DNMT1-205ENST00000585920 CCDC146Q8IYE0 955 aa17.32■□□□□ 0.36
DNMT1-205ENST00000585920 BCL9O00512 1426 aa17.31■□□□□ 0.36
DNMT1-205ENST00000585920 PRIM1P49642 420 aaKnown RBP17.31■□□□□ 0.36
DNMT1-205ENST00000585920 SF3B2Q13435 895 aaKnown RBP17.31■□□□□ 0.36
DNMT1-205ENST00000585920 CCDC125Q86Z20 511 aa17.31■□□□□ 0.36
DNMT1-205ENST00000585920 FAM9BQ8IZU0 186 aa17.31■□□□□ 0.36
DNMT1-205ENST00000585920 SYTL4Q96C24 671 aaPredicted RBP17.31■□□□□ 0.36
DNMT1-205ENST00000585920 RUNDC1Q96C34 613 aa17.31■□□□□ 0.36
DNMT1-205ENST00000585920 DCAF5Q96JK2 942 aa17.31■□□□□ 0.36
DNMT1-205ENST00000585920 MPRIPQ6WCQ1 1025 aa17.3■□□□□ 0.36
DNMT1-205ENST00000585920 UPF1Q92900 1129 aaKnown RBP eCLIP17.3■□□□□ 0.36
DNMT1-205ENST00000585920 BCL11BQ9C0K0 894 aaPredicted RBP17.3■□□□□ 0.36
DNMT1-205ENST00000585920 GNAT3A8MTJ3 354 aa17.29■□□□□ 0.36
DNMT1-205ENST00000585920 KCNQ2O43526 872 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 143.3 ms