RNA–Protein interactions for RNA: ENST00000585388.1

LSM12-202, Transcript of LSM12 homolog, humanhuman

TSL 3 BASIC

Gene LSM12, Length 942 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-202ENST00000585388 SLC27A3Q5K4L6 730 aa22.81■■□□□ 1.24
LSM12-202ENST00000585388 ZCRB1Q8TBF4 217 aaKnown RBP22.81■■□□□ 1.24
LSM12-202ENST00000585388 INSRP06213 1382 aa22.8■■□□□ 1.24
LSM12-202ENST00000585388 ATF5Q9Y2D1 282 aaPredicted RBP22.8■■□□□ 1.24
LSM12-202ENST00000585388 LY75O60449 1722 aa22.79■■□□□ 1.24
LSM12-202ENST00000585388 SYTL4Q96C24 671 aaPredicted RBP22.79■■□□□ 1.24
LSM12-202ENST00000585388 NSD3Q9BZ95 1437 aa22.79■■□□□ 1.24
LSM12-202ENST00000585388 RAPGEF4Q8WZA2 1011 aa22.78■■□□□ 1.24
LSM12-202ENST00000585388 LRRC4BQ9NT99 713 aa22.78■■□□□ 1.24
LSM12-202ENST00000585388 ANKRD26Q9UPS8 1709 aa22.77■■□□□ 1.24
LSM12-202ENST00000585388 NBPF6Q5VWK0 638 aa22.77■■□□□ 1.24
LSM12-202ENST00000585388 NBPF4Q96M43 638 aa22.77■■□□□ 1.24
LSM12-202ENST00000585388 YY1P25490 414 aa22.76■■□□□ 1.23
LSM12-202ENST00000585388 PRIM1P49642 420 aaKnown RBP22.76■■□□□ 1.23
LSM12-202ENST00000585388 ZNF827Q17R98 1081 aa22.76■■□□□ 1.23
LSM12-202ENST00000585388 NSD2O96028 1365 aa22.76■■□□□ 1.23
LSM12-202ENST00000585388 TUBGCP6Q96RT7 1819 aa22.75■■□□□ 1.23
LSM12-202ENST00000585388 TATP17735 454 aaPredicted RBP22.74■■□□□ 1.23
LSM12-202ENST00000585388 USHBP1Q8N6Y0 703 aa22.74■■□□□ 1.23
LSM12-202ENST00000585388 SGIP1Q9BQI5 828 aa22.74■■□□□ 1.23
LSM12-202ENST00000585388 HSP90AB2PQ58FF8 381 aa22.73■■□□□ 1.23
LSM12-202ENST00000585388 AKT1S1Q96B36 256 aa22.73■■□□□ 1.23
LSM12-202ENST00000585388 PCDH11XQ9BZA7 1347 aa22.73■■□□□ 1.23
LSM12-202ENST00000585388 PCDH11YQ9BZA8 1340 aa22.73■■□□□ 1.23
LSM12-202ENST00000585388 CARD14Q9BXL6 1004 aa22.72■■□□□ 1.23
LSM12-202ENST00000585388 FHDC1Q9C0D6 1143 aaPredicted RBP22.72■■□□□ 1.23
LSM12-202ENST00000585388 PKD1L3Q7Z443 1732 aa22.71■■□□□ 1.23
LSM12-202ENST00000585388 SLC16A10Q8TF71 515 aa22.71■■□□□ 1.23
LSM12-202ENST00000585388 ARXQ96QS3 562 aa22.7■■□□□ 1.22
LSM12-202ENST00000585388 PCGF6Q9BYE7 350 aa22.7■■□□□ 1.22
LSM12-202ENST00000585388 MAP3K5Q99683 1374 aa22.7■■□□□ 1.22
LSM12-202ENST00000585388 COL24A1Q17RW2 1714 aa22.7■■□□□ 1.22
LSM12-202ENST00000585388 SYT17Q9BSW7 474 aa22.69■■□□□ 1.22
LSM12-202ENST00000585388 EMILIN1Q9Y6C2 1016 aa22.69■■□□□ 1.22
LSM12-202ENST00000585388 PNPLA7Q6ZV29 1317 aa22.68■■□□□ 1.22
LSM12-202ENST00000585388 TFCP2L1Q9NZI6 479 aa22.68■■□□□ 1.22
LSM12-202ENST00000585388 MAP2P11137 1827 aaKnown RBP22.68■■□□□ 1.22
LSM12-202ENST00000585388 NCAPD2Q15021 1401 aa22.67■■□□□ 1.22
LSM12-202ENST00000585388 CCNL1Q9UK58 526 aaPredicted RBP22.67■■□□□ 1.22
LSM12-202ENST00000585388 C5P01031 1676 aa22.67■■□□□ 1.22
LSM12-202ENST00000585388 TOGARAM1Q9Y4F4 1720 aa22.65■■□□□ 1.22
LSM12-202ENST00000585388 KCNQ4P56696 695 aa22.65■■□□□ 1.22
LSM12-202ENST00000585388 ITGB4P16144 1822 aa22.64■■□□□ 1.22
LSM12-202ENST00000585388 PPM1GO15355 546 aaPredicted RBP22.64■■□□□ 1.21
LSM12-202ENST00000585388 HMGB2P26583 209 aaKnown RBP22.64■■□□□ 1.21
LSM12-202ENST00000585388 POLD1P28340 1107 aa22.64■■□□□ 1.21
LSM12-202ENST00000585388 WASHC2AQ641Q2 1341 aa22.62■■□□□ 1.21
LSM12-202ENST00000585388 TAF1LQ8IZX4 1826 aa22.62■■□□□ 1.21
LSM12-202ENST00000585388 POLR3GLQ9BT43 218 aa22.62■■□□□ 1.21
LSM12-202ENST00000585388 CYP27B1O15528 508 aa22.61■■□□□ 1.21
LSM12-202ENST00000585388 PALLDQ8WX93 1383 aa22.61■■□□□ 1.21
LSM12-202ENST00000585388 CHD4Q14839 1912 aa22.61■■□□□ 1.21
LSM12-202ENST00000585388 EIF4G2P78344 907 aaKnown RBP eCLIP22.6■■□□□ 1.21
LSM12-202ENST00000585388 SPG7Q9UQ90 795 aa22.59■■□□□ 1.21
LSM12-202ENST00000585388 MPRIPQ6WCQ1 1025 aa22.57■■□□□ 1.2
LSM12-202ENST00000585388 SMARCC1Q92922 1105 aaPredicted RBP22.57■■□□□ 1.2
LSM12-202ENST00000585388 PLEKHG2Q9H7P9 1386 aa22.57■■□□□ 1.2
LSM12-202ENST00000585388 MSH5O43196 834 aa22.56■■□□□ 1.2
LSM12-202ENST00000585388 KLHL34Q8N239 644 aa22.56■■□□□ 1.2
LSM12-202ENST00000585388 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.56■■□□□ 1.2
LSM12-202ENST00000585388 POLKQ9UBT6 870 aa22.56■■□□□ 1.2
LSM12-202ENST00000585388 C4BP0C0L5 1744 aa22.56■■□□□ 1.2
LSM12-202ENST00000585388 HSPA5P11021 654 aaKnown RBP22.55■■□□□ 1.2
LSM12-202ENST00000585388 EYA1Q99502 592 aa22.55■■□□□ 1.2
LSM12-202ENST00000585388 NKX1-1Q15270 411 aaPredicted RBP22.54■■□□□ 1.2
LSM12-202ENST00000585388 COL23A1Q86Y22 540 aaPredicted RBP22.53■■□□□ 1.2
LSM12-202ENST00000585388 FLAD1Q8NFF5 587 aa22.53■■□□□ 1.2
LSM12-202ENST00000585388 CCER1Q8TC90 406 aaPredicted RBP22.53■■□□□ 1.2
LSM12-202ENST00000585388 UTRNP46939 3433 aa22.53■■□□□ 1.2
LSM12-202ENST00000585388 TNNT2P45379 298 aaPredicted RBP22.52■■□□□ 1.2
LSM12-202ENST00000585388 EIF4A2Q14240 407 aaKnown RBP22.51■■□□□ 1.19
LSM12-202ENST00000585388 GPR162Q16538 588 aa22.51■■□□□ 1.19
LSM12-202ENST00000585388 UBR3Q6ZT12 1888 aa22.5■■□□□ 1.19
LSM12-202ENST00000585388 PIGBQ92521 554 aa22.5■■□□□ 1.19
LSM12-202ENST00000585388 IFNL2Q8IZJ0 200 aa22.49■■□□□ 1.19
LSM12-202ENST00000585388 AK7Q96M32 723 aa22.49■■□□□ 1.19
LSM12-202ENST00000585388 PANK3Q9H999 370 aa22.49■■□□□ 1.19
LSM12-202ENST00000585388 TMOD3Q9NYL9 352 aa22.49■■□□□ 1.19
LSM12-202ENST00000585388 IGSF1Q8N6C5 1336 aa22.49■■□□□ 1.19
LSM12-202ENST00000585388 PHKG2P15735 406 aa22.48■■□□□ 1.19
LSM12-202ENST00000585388 ZNF784Q8NCA9 323 aaPredicted RBP22.47■■□□□ 1.19
LSM12-202ENST00000585388 MSL1Q68DK7 614 aa22.46■■□□□ 1.19
LSM12-202ENST00000585388 NLGN2Q8NFZ4 835 aa22.46■■□□□ 1.19
LSM12-202ENST00000585388 PELP1Q8IZL8 1130 aaKnown RBP22.45■■□□□ 1.18
LSM12-202ENST00000585388 LOC102724428A0A0B4J2F2 783 aa22.44■■□□□ 1.18
LSM12-202ENST00000585388 SIK1P57059 783 aa22.44■■□□□ 1.18
LSM12-202ENST00000585388 SSFA2P28290 1259 aa22.42■■□□□ 1.18
LSM12-202ENST00000585388 MORC1Q86VD1 984 aa22.42■■□□□ 1.18
LSM12-202ENST00000585388 ZNF831Q5JPB2 1677 aa22.42■■□□□ 1.18
LSM12-202ENST00000585388 HSP90AB1P08238 724 aaKnown RBP22.41■■□□□ 1.18
LSM12-202ENST00000585388 GOLGB1Q14789 3259 aaKnown RBP22.41■■□□□ 1.18
LSM12-202ENST00000585388 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.4■■□□□ 1.18
LSM12-202ENST00000585388 PHF14O94880 888 aa22.4■■□□□ 1.18
LSM12-202ENST00000585388 ASAP1Q9ULH1 1129 aa22.4■■□□□ 1.18
LSM12-202ENST00000585388 KNSTRNQ9Y448 316 aa22.4■■□□□ 1.18
LSM12-202ENST00000585388 CD2APQ9Y5K6 639 aa22.4■■□□□ 1.18
LSM12-202ENST00000585388 GRIN3BO60391 1043 aa22.39■■□□□ 1.17
LSM12-202ENST00000585388 PLEKHO1Q53GL0 409 aaPredicted RBP22.39■■□□□ 1.17
LSM12-202ENST00000585388 LINC00116Q8NCU8 138 aa22.39■■□□□ 1.17
LSM12-202ENST00000585388 ERVV-2B6SEH9 535 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms