RNA–Protein interactions for RNA: ENST00000585339.5

RANBP3-204, Transcript of RAN binding protein 3, humanhuman

TSL 4

Gene RANBP3, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-204ENST00000585339 NME9Q86XW9 330 aa10.92□□□□□ -0.66
RANBP3-204ENST00000585339 PKD1L3Q7Z443 1732 aa10.92□□□□□ -0.66
RANBP3-204ENST00000585339 KIF20BQ96Q89 1820 aa10.91□□□□□ -0.66
RANBP3-204ENST00000585339 ANKRD24Q8TF21 1146 aa10.91□□□□□ -0.66
RANBP3-204ENST00000585339 SLC16A10Q8TF71 515 aa10.91□□□□□ -0.66
RANBP3-204ENST00000585339 NLRP2Q9NX02 1062 aa10.91□□□□□ -0.66
RANBP3-204ENST00000585339 WDR90Q96KV7 1748 aa10.91□□□□□ -0.66
RANBP3-204ENST00000585339 ANKRD36BQ8N2N9 1353 aa10.9□□□□□ -0.66
RANBP3-204ENST00000585339 SLC27A3Q5K4L6 730 aa10.9□□□□□ -0.66
RANBP3-204ENST00000585339 ZNF692Q9BU19 519 aaPredicted RBP10.9□□□□□ -0.66
RANBP3-204ENST00000585339 POLD1P28340 1107 aa10.89□□□□□ -0.67
RANBP3-204ENST00000585339 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.89□□□□□ -0.67
RANBP3-204ENST00000585339 A0A1W2PP64 1363 aa10.88□□□□□ -0.67
RANBP3-204ENST00000585339 EDC4Q6P2E9 1401 aaKnown RBP10.87□□□□□ -0.67
RANBP3-204ENST00000585339 ARFGEF1Q9Y6D6 1849 aa10.87□□□□□ -0.67
RANBP3-204ENST00000585339 MSL1Q68DK7 614 aa10.87□□□□□ -0.67
RANBP3-204ENST00000585339 COL23A1Q86Y22 540 aaPredicted RBP10.87□□□□□ -0.67
RANBP3-204ENST00000585339 L3MBTL2Q969R5 705 aa10.87□□□□□ -0.67
RANBP3-204ENST00000585339 TFCP2L1Q9NZI6 479 aa10.87□□□□□ -0.67
RANBP3-204ENST00000585339 ANKRD26Q9UPS8 1709 aa10.87□□□□□ -0.67
RANBP3-204ENST00000585339 DDX54Q8TDD1 881 aaKnown RBP10.86□□□□□ -0.67
RANBP3-204ENST00000585339 ROCK2O75116 1388 aaKnown RBP10.86□□□□□ -0.67
RANBP3-204ENST00000585339 C4AP0C0L4 1744 aa10.86□□□□□ -0.67
RANBP3-204ENST00000585339 COL5A3P25940 1745 aaPredicted RBP10.86□□□□□ -0.67
RANBP3-204ENST00000585339 SBF1O95248 1867 aa10.85□□□□□ -0.67
RANBP3-204ENST00000585339 HSPA6P17066 643 aa10.85□□□□□ -0.67
RANBP3-204ENST00000585339 PRIM1P49642 420 aaKnown RBP10.85□□□□□ -0.67
RANBP3-204ENST00000585339 AMIGO3Q86WK7 504 aa10.85□□□□□ -0.67
RANBP3-204ENST00000585339 GRIN3BO60391 1043 aa10.84□□□□□ -0.67
RANBP3-204ENST00000585339 CCNL1Q9UK58 526 aaPredicted RBP10.84□□□□□ -0.67
RANBP3-204ENST00000585339 ZNF526Q8TF50 670 aaPredicted RBP10.83□□□□□ -0.68
RANBP3-204ENST00000585339 IP6K1Q92551 441 aa10.83□□□□□ -0.68
RANBP3-204ENST00000585339 SYTL4Q96C24 671 aaPredicted RBP10.83□□□□□ -0.68
RANBP3-204ENST00000585339 MYH14Q7Z406 1995 aaKnown RBP10.83□□□□□ -0.68
RANBP3-204ENST00000585339 FBLN1P23142 703 aa10.82□□□□□ -0.68
RANBP3-204ENST00000585339 LTV1Q96GA3 475 aaPredicted RBP10.82□□□□□ -0.68
RANBP3-204ENST00000585339 GPBP1L1Q9HC44 474 aaPredicted RBP10.82□□□□□ -0.68
RANBP3-204ENST00000585339 MAP3K19Q56UN5 1328 aa10.82□□□□□ -0.68
RANBP3-204ENST00000585339 KIF3CO14782 793 aa10.81□□□□□ -0.68
RANBP3-204ENST00000585339 SLC12A5Q9H2X9 1139 aa10.81□□□□□ -0.68
RANBP3-204ENST00000585339 WWC3Q9ULE0 1092 aa10.81□□□□□ -0.68
RANBP3-204ENST00000585339 CD2APQ9Y5K6 639 aa10.81□□□□□ -0.68
RANBP3-204ENST00000585339 CCDC88AQ3V6T2 1871 aa10.81□□□□□ -0.68
RANBP3-204ENST00000585339 USP47Q96K76 1375 aa10.8□□□□□ -0.68
RANBP3-204ENST00000585339 VIRMAQ69YN4 1812 aaKnown RBP10.8□□□□□ -0.68
RANBP3-204ENST00000585339 HOXC9P31274 260 aa10.8□□□□□ -0.68
RANBP3-204ENST00000585339 SMIM5Q71RC9 77 aa10.8□□□□□ -0.68
RANBP3-204ENST00000585339 SIN3AQ96ST3 1273 aa10.8□□□□□ -0.68
RANBP3-204ENST00000585339 IGSF1Q8N6C5 1336 aa10.8□□□□□ -0.68
RANBP3-204ENST00000585339 ZNF831Q5JPB2 1677 aa10.79□□□□□ -0.68
RANBP3-204ENST00000585339 PALLDQ8WX93 1383 aa10.79□□□□□ -0.68
RANBP3-204ENST00000585339 MSH5O43196 834 aa10.79□□□□□ -0.68
RANBP3-204ENST00000585339 USHBP1Q8N6Y0 703 aa10.79□□□□□ -0.68
RANBP3-204ENST00000585339 PXDNLA1KZ92 1463 aa10.79□□□□□ -0.68
RANBP3-204ENST00000585339 TNRC6CQ9HCJ0 1690 aaKnown RBP10.79□□□□□ -0.68
RANBP3-204ENST00000585339 RTL1A6NKG5 1358 aa10.78□□□□□ -0.68
RANBP3-204ENST00000585339 ZCRB1Q8TBF4 217 aaKnown RBP10.78□□□□□ -0.68
RANBP3-204ENST00000585339 NBPF6Q5VWK0 638 aa10.77□□□□□ -0.69
RANBP3-204ENST00000585339 TMC1Q8TDI8 760 aa10.77□□□□□ -0.69
RANBP3-204ENST00000585339 NBPF4Q96M43 638 aa10.77□□□□□ -0.69
RANBP3-204ENST00000585339 NCAPD2Q15021 1401 aa10.76□□□□□ -0.69
RANBP3-204ENST00000585339 ADAMTS7Q9UKP4 1686 aa10.76□□□□□ -0.69
RANBP3-204ENST00000585339 DLEC1Q9Y238 1755 aa10.76□□□□□ -0.69
RANBP3-204ENST00000585339 HDGFL2Q7Z4V5 671 aaPredicted RBP10.76□□□□□ -0.69
RANBP3-204ENST00000585339 DNAJC5GQ8N7S2 189 aa10.76□□□□□ -0.69
RANBP3-204ENST00000585339 AFDNP55196 1824 aaKnown RBP10.76□□□□□ -0.69
RANBP3-204ENST00000585339 TIAM2Q8IVF5 1701 aa10.75□□□□□ -0.69
RANBP3-204ENST00000585339 TJP1Q07157 1748 aa10.75□□□□□ -0.69
RANBP3-204ENST00000585339 CYP27B1O15528 508 aa10.74□□□□□ -0.69
RANBP3-204ENST00000585339 RRS1Q15050 365 aaKnown RBP10.74□□□□□ -0.69
RANBP3-204ENST00000585339 C10orf71Q711Q0 1435 aa10.74□□□□□ -0.69
RANBP3-204ENST00000585339 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.73□□□□□ -0.69
RANBP3-204ENST00000585339 PHF14O94880 888 aa10.73□□□□□ -0.69
RANBP3-204ENST00000585339 LINC00116Q8NCU8 138 aa10.73□□□□□ -0.69
RANBP3-204ENST00000585339 PCDH11XQ9BZA7 1347 aa10.73□□□□□ -0.69
RANBP3-204ENST00000585339 PCDH11YQ9BZA8 1340 aa10.73□□□□□ -0.69
RANBP3-204ENST00000585339 AMPHP49418 695 aa10.72□□□□□ -0.69
RANBP3-204ENST00000585339 MPRIPQ6WCQ1 1025 aa10.72□□□□□ -0.69
RANBP3-204ENST00000585339 FLAD1Q8NFF5 587 aa10.72□□□□□ -0.69
RANBP3-204ENST00000585339 TESK2Q96S53 571 aa10.72□□□□□ -0.69
RANBP3-204ENST00000585339 TERF2IPQ9NYB0 399 aa10.72□□□□□ -0.69
RANBP3-204ENST00000585339 CGNL1Q0VF96 1302 aa10.72□□□□□ -0.69
RANBP3-204ENST00000585339 INSRP06213 1382 aa10.71□□□□□ -0.69
RANBP3-204ENST00000585339 KDRP35968 1356 aa10.71□□□□□ -0.69
RANBP3-204ENST00000585339 APLP1P51693 650 aa10.71□□□□□ -0.69
RANBP3-204ENST00000585339 HTRA3P83110 453 aa10.71□□□□□ -0.69
RANBP3-204ENST00000585339 SMG6Q86US8 1419 aaKnown RBP10.71□□□□□ -0.69
RANBP3-204ENST00000585339 COG3Q96JB2 828 aa10.71□□□□□ -0.69
RANBP3-204ENST00000585339 AK7Q96M32 723 aa10.71□□□□□ -0.69
RANBP3-204ENST00000585339 CARD11Q9BXL7 1154 aa10.71□□□□□ -0.69
RANBP3-204ENST00000585339 NSD3Q9BZ95 1437 aa10.71□□□□□ -0.69
RANBP3-204ENST00000585339 NMRK2Q9NPI5 230 aa10.71□□□□□ -0.69
RANBP3-204ENST00000585339 DICER1Q9UPY3 1922 aaKnown RBP10.7□□□□□ -0.7
RANBP3-204ENST00000585339 KCPQ6ZWJ8 1503 aa10.7□□□□□ -0.7
RANBP3-204ENST00000585339 NEUROD1Q13562 356 aa10.7□□□□□ -0.7
RANBP3-204ENST00000585339 ITPK1Q13572 414 aa10.7□□□□□ -0.7
RANBP3-204ENST00000585339 PIGBQ92521 554 aa10.7□□□□□ -0.7
RANBP3-204ENST00000585339 CACNA1SQ13698 1873 aa10.7□□□□□ -0.7
RANBP3-204ENST00000585339 FLT4P35916 1363 aa10.69□□□□□ -0.7
RANBP3-204ENST00000585339 TATP17735 454 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms