RNA–Protein interactions for RNA: ENST00000585096.1

SRSF1-209, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 4 BASIC

Gene SRSF1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-209ENST00000585096 LRP5O75197 1615 aa24.53■■□□□ 1.52
SRSF1-209ENST00000585096 TNNT2P45379 298 aaPredicted RBP24.52■■□□□ 1.52
SRSF1-209ENST00000585096 NSD2O96028 1365 aa24.52■■□□□ 1.52
SRSF1-209ENST00000585096 NHSQ6T4R5 1651 aa24.51■■□□□ 1.51
SRSF1-209ENST00000585096 KNSTRNQ9Y448 316 aa24.51■■□□□ 1.51
SRSF1-209ENST00000585096 SYTL4Q96C24 671 aaPredicted RBP24.5■■□□□ 1.51
SRSF1-209ENST00000585096 ANO8Q9HCE9 1232 aaPredicted RBP24.5■■□□□ 1.51
SRSF1-209ENST00000585096 STK32BQ9NY57 414 aa24.5■■□□□ 1.51
SRSF1-209ENST00000585096 PRIM1P49642 420 aaKnown RBP24.49■■□□□ 1.51
SRSF1-209ENST00000585096 KIF7Q2M1P5 1343 aa24.48■■□□□ 1.51
SRSF1-209ENST00000585096 PCDH11XQ9BZA7 1347 aa24.47■■□□□ 1.51
SRSF1-209ENST00000585096 PCDH11YQ9BZA8 1340 aa24.47■■□□□ 1.51
SRSF1-209ENST00000585096 MORC1Q86VD1 984 aa24.47■■□□□ 1.51
SRSF1-209ENST00000585096 SLC15A2Q16348 729 aa24.46■■□□□ 1.51
SRSF1-209ENST00000585096 EYA1Q99502 592 aa24.45■■□□□ 1.5
SRSF1-209ENST00000585096 SPON1Q9HCB6 807 aa24.45■■□□□ 1.5
SRSF1-209ENST00000585096 RGPD2P0DJD1 1756 aa24.44■■□□□ 1.5
SRSF1-209ENST00000585096 SLC27A3Q5K4L6 730 aa24.43■■□□□ 1.5
SRSF1-209ENST00000585096 EIF4A2Q14240 407 aaKnown RBP24.42■■□□□ 1.5
SRSF1-209ENST00000585096 SPG7Q9UQ90 795 aa24.42■■□□□ 1.5
SRSF1-209ENST00000585096 NCAPD2Q15021 1401 aa24.42■■□□□ 1.5
SRSF1-209ENST00000585096 ANKRD26Q9UPS8 1709 aa24.41■■□□□ 1.5
SRSF1-209ENST00000585096 CYP27B1O15528 508 aa24.39■■□□□ 1.49
SRSF1-209ENST00000585096 LRRC4BQ9NT99 713 aa24.39■■□□□ 1.49
SRSF1-209ENST00000585096 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.39■■□□□ 1.493e-19■■■□□ 14.9
SRSF1-209ENST00000585096 AMER1Q5JTC6 1135 aaPredicted RBP24.38■■□□□ 1.49
SRSF1-209ENST00000585096 PPP1R1BQ9UD71 204 aaPredicted RBP24.38■■□□□ 1.49
SRSF1-209ENST00000585096 BTAF1O14981 1849 aa24.38■■□□□ 1.49
SRSF1-209ENST00000585096 PDGFDQ9GZP0 370 aaPredicted RBP24.36■■□□□ 1.49
SRSF1-209ENST00000585096 SHANK3Q9BYB0 1731 aa24.35■■□□□ 1.49
SRSF1-209ENST00000585096 ZBTB7AO95365 584 aa24.35■■□□□ 1.49
SRSF1-209ENST00000585096 MAP2P11137 1827 aaKnown RBP24.35■■□□□ 1.49
SRSF1-209ENST00000585096 NKX1-1Q15270 411 aaPredicted RBP24.34■■□□□ 1.49
SRSF1-209ENST00000585096 MPRIPQ6WCQ1 1025 aa24.34■■□□□ 1.49
SRSF1-209ENST00000585096 IGSF1Q8N6C5 1336 aa24.34■■□□□ 1.49
SRSF1-209ENST00000585096 DOT1LQ8TEK3 1739 aa24.33■■□□□ 1.49
SRSF1-209ENST00000585096 PLEKHG2Q9H7P9 1386 aa24.33■■□□□ 1.49
SRSF1-209ENST00000585096 PER1O15534 1290 aaPredicted RBP24.33■■□□□ 1.49
SRSF1-209ENST00000585096 ZNF827Q17R98 1081 aa24.33■■□□□ 1.49
SRSF1-209ENST00000585096 CCNL1Q9UK58 526 aaPredicted RBP24.33■■□□□ 1.49
SRSF1-209ENST00000585096 HMGB2P26583 209 aaKnown RBP24.32■■□□□ 1.48
SRSF1-209ENST00000585096 IFNL2Q8IZJ0 200 aa24.32■■□□□ 1.48
SRSF1-209ENST00000585096 AKT1S1Q96B36 256 aa24.32■■□□□ 1.48
SRSF1-209ENST00000585096 MTFR1LQ9H019 292 aa24.31■■□□□ 1.48
SRSF1-209ENST00000585096 KCNQ4P56696 695 aa24.3■■□□□ 1.48
SRSF1-209ENST00000585096 ATF5Q9Y2D1 282 aaPredicted RBP24.3■■□□□ 1.48
SRSF1-209ENST00000585096 KAT6BQ8WYB5 2073 aa24.3■■□□□ 1.48
SRSF1-209ENST00000585096 PAPPAQ13219 1627 aa24.29■■□□□ 1.48
SRSF1-209ENST00000585096 PHKG2P15735 406 aa24.29■■□□□ 1.48
SRSF1-209ENST00000585096 PLEKHO1Q53GL0 409 aaPredicted RBP24.28■■□□□ 1.48
SRSF1-209ENST00000585096 CC2D1BQ5T0F9 858 aaKnown RBP24.28■■□□□ 1.48
SRSF1-209ENST00000585096 SMARCC1Q92922 1105 aaPredicted RBP24.28■■□□□ 1.48
SRSF1-209ENST00000585096 TFCP2L1Q9NZI6 479 aa24.28■■□□□ 1.48
SRSF1-209ENST00000585096 CASZ1Q86V15 1759 aa24.28■■□□□ 1.48
SRSF1-209ENST00000585096 PKD1L3Q7Z443 1732 aa24.27■■□□□ 1.48
SRSF1-209ENST00000585096 PALLDQ8WX93 1383 aa24.27■■□□□ 1.48
SRSF1-209ENST00000585096 PTGER2P43116 358 aa24.26■■□□□ 1.47
SRSF1-209ENST00000585096 AMOTQ4VCS5 1084 aa24.26■■□□□ 1.47
SRSF1-209ENST00000585096 PIGBQ92521 554 aa24.26■■□□□ 1.47
SRSF1-209ENST00000585096 IL13P35225 146 aa24.25■■□□□ 1.47
SRSF1-209ENST00000585096 MTHFSP49914 203 aa24.25■■□□□ 1.47
SRSF1-209ENST00000585096 TMOD3Q9NYL9 352 aa24.25■■□□□ 1.47
SRSF1-209ENST00000585096 HSP90AB1P08238 724 aaKnown RBP24.24■■□□□ 1.47
SRSF1-209ENST00000585096 SLC16A10Q8TF71 515 aa24.24■■□□□ 1.47
SRSF1-209ENST00000585096 NPC1L1Q9UHC9 1359 aa24.24■■□□□ 1.47
SRSF1-209ENST00000585096 SULT6B1Q6IMI4 303 aa24.23■■□□□ 1.47
SRSF1-209ENST00000585096 PNPLA7Q6ZV29 1317 aa24.22■■□□□ 1.47
SRSF1-209ENST00000585096 AEBP1Q8IUX7 1158 aa24.22■■□□□ 1.47
SRSF1-209ENST00000585096 ZNF530Q6P9A1 599 aaPredicted RBP24.2■■□□□ 1.46
SRSF1-209ENST00000585096 DCAF5Q96JK2 942 aa24.2■■□□□ 1.46
SRSF1-209ENST00000585096 SGIP1Q9BQI5 828 aa24.2■■□□□ 1.46
SRSF1-209ENST00000585096 LY75O60449 1722 aa24.2■■□□□ 1.46
SRSF1-209ENST00000585096 DCAF8L1A6NGE4 600 aa24.19■■□□□ 1.46
SRSF1-209ENST00000585096 ERVV-2B6SEH9 535 aa24.19■■□□□ 1.46
SRSF1-209ENST00000585096 CNGB1Q14028 1251 aaPredicted RBP24.19■■□□□ 1.46
SRSF1-209ENST00000585096 KDRP35968 1356 aa24.18■■□□□ 1.46
SRSF1-209ENST00000585096 C1orf141Q5JVX7 400 aa24.18■■□□□ 1.46
SRSF1-209ENST00000585096 DIAPH1O60610 1272 aaKnown RBP24.17■■□□□ 1.46
SRSF1-209ENST00000585096 ARXQ96QS3 562 aa24.17■■□□□ 1.46
SRSF1-209ENST00000585096 TOGARAM1Q9Y4F4 1720 aa24.16■■□□□ 1.46
SRSF1-209ENST00000585096 MSH5O43196 834 aa24.16■■□□□ 1.46
SRSF1-209ENST00000585096 POLD1P28340 1107 aa24.16■■□□□ 1.46
SRSF1-209ENST00000585096 LOC102724428A0A0B4J2F2 783 aa24.15■■□□□ 1.46
SRSF1-209ENST00000585096 SIK1P57059 783 aa24.15■■□□□ 1.46
SRSF1-209ENST00000585096 FLAD1Q8NFF5 587 aa24.15■■□□□ 1.46
SRSF1-209ENST00000585096 ASAP1Q9ULH1 1129 aa24.15■■□□□ 1.46
SRSF1-209ENST00000585096 AK7Q96M32 723 aa24.14■■□□□ 1.45
SRSF1-209ENST00000585096 FHDC1Q9C0D6 1143 aaPredicted RBP24.14■■□□□ 1.45
SRSF1-209ENST00000585096 ATG3Q9NT62 314 aa24.14■■□□□ 1.45
SRSF1-209ENST00000585096 CABP4P57796 275 aa24.13■■□□□ 1.45
SRSF1-209ENST00000585096 COL23A1Q86Y22 540 aaPredicted RBP24.13■■□□□ 1.45
SRSF1-209ENST00000585096 SYT17Q9BSW7 474 aa24.12■■□□□ 1.45
SRSF1-209ENST00000585096 HMOX1P09601 288 aa24.11■■□□□ 1.45
SRSF1-209ENST00000585096 ATP6V1AP38606 617 aa24.11■■□□□ 1.45
SRSF1-209ENST00000585096 QSER1Q2KHR3 1735 aa24.1■■□□□ 1.45
SRSF1-209ENST00000585096 AKAP4Q5JQC9 854 aa24.09■■□□□ 1.45
SRSF1-209ENST00000585096 ITGB4P16144 1822 aa24.09■■□□□ 1.45
SRSF1-209ENST00000585096 KDM6AO15550 1401 aaPredicted RBP24.09■■□□□ 1.45
SRSF1-209ENST00000585096 LINC00116Q8NCU8 138 aa24.08■■□□□ 1.45
SRSF1-209ENST00000585096 CFAP53Q96M91 514 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms