RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 PLEKHG2Q9H7P9 1386 aa18.08■□□□□ 0.49
ERBB2-220ENST00000584684 R3HDM1Q15032 1099 aaKnown RBP18.08■□□□□ 0.48
ERBB2-220ENST00000584684 NBPF14Q5TI25 921 aa18.07■□□□□ 0.48
ERBB2-220ENST00000584684 ZCRB1Q8TBF4 217 aaKnown RBP18.07■□□□□ 0.48
ERBB2-220ENST00000584684 RAPGEF4Q8WZA2 1011 aa18.07■□□□□ 0.48
ERBB2-220ENST00000584684 PAPPAQ13219 1627 aa18.07■□□□□ 0.48
ERBB2-220ENST00000584684 KCNQ2O43526 872 aa18.06■□□□□ 0.48
ERBB2-220ENST00000584684 USHBP1Q8N6Y0 703 aa18.05■□□□□ 0.48
ERBB2-220ENST00000584684 TATP17735 454 aaPredicted RBP18.04■□□□□ 0.48
ERBB2-220ENST00000584684 PROM2Q8N271 834 aa18.04■□□□□ 0.48
ERBB2-220ENST00000584684 DDX54Q8TDD1 881 aaKnown RBP18.04■□□□□ 0.48
ERBB2-220ENST00000584684 KNSTRNQ9Y448 316 aa18.04■□□□□ 0.48
ERBB2-220ENST00000584684 CASZ1Q86V15 1759 aa18.04■□□□□ 0.48
ERBB2-220ENST00000584684 PCDH11XQ9BZA7 1347 aa18.03■□□□□ 0.48
ERBB2-220ENST00000584684 PCDH11YQ9BZA8 1340 aa18.03■□□□□ 0.48
ERBB2-220ENST00000584684 PPM1GO15355 546 aaPredicted RBP18.03■□□□□ 0.48
ERBB2-220ENST00000584684 AMER1Q5JTC6 1135 aaPredicted RBP18.03■□□□□ 0.48
ERBB2-220ENST00000584684 ACSBG1Q96GR2 724 aa18.03■□□□□ 0.48
ERBB2-220ENST00000584684 LY75O60449 1722 aa18.02■□□□□ 0.48
ERBB2-220ENST00000584684 TXNRD1Q16881 649 aa18.02■□□□□ 0.48
ERBB2-220ENST00000584684 ANO8Q9HCE9 1232 aaPredicted RBP18.02■□□□□ 0.48
ERBB2-220ENST00000584684 KAT6BQ8WYB5 2073 aa18.02■□□□□ 0.47
ERBB2-220ENST00000584684 TOGARAM1Q9Y4F4 1720 aa18.01■□□□□ 0.47
ERBB2-220ENST00000584684 TNNT2P45379 298 aaPredicted RBP18■□□□□ 0.47
ERBB2-220ENST00000584684 EIF4A2Q14240 407 aaKnown RBP18■□□□□ 0.47
ERBB2-220ENST00000584684 MORC1Q86VD1 984 aa18■□□□□ 0.47
ERBB2-220ENST00000584684 EYA1Q99502 592 aa18■□□□□ 0.47
ERBB2-220ENST00000584684 NPC1L1Q9UHC9 1359 aa18■□□□□ 0.47
ERBB2-220ENST00000584684 IGSF1Q8N6C5 1336 aa17.99■□□□□ 0.47
ERBB2-220ENST00000584684 PER1O15534 1290 aaPredicted RBP17.99■□□□□ 0.47
ERBB2-220ENST00000584684 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.99■□□□□ 0.47
ERBB2-220ENST00000584684 QSER1Q2KHR3 1735 aa17.98■□□□□ 0.47
ERBB2-220ENST00000584684 PRIM1P49642 420 aaKnown RBP17.97■□□□□ 0.47
ERBB2-220ENST00000584684 CYP27B1O15528 508 aa17.96■□□□□ 0.47
ERBB2-220ENST00000584684 SLC27A3Q5K4L6 730 aa17.96■□□□□ 0.47
ERBB2-220ENST00000584684 ITGB4P16144 1822 aa17.95■□□□□ 0.46
ERBB2-220ENST00000584684 SPG7Q9UQ90 795 aa17.95■□□□□ 0.46
ERBB2-220ENST00000584684 NKX1-1Q15270 411 aaPredicted RBP17.94■□□□□ 0.46
ERBB2-220ENST00000584684 SYTL4Q96C24 671 aaPredicted RBP17.94■□□□□ 0.46
ERBB2-220ENST00000584684 STK32BQ9NY57 414 aa17.94■□□□□ 0.46
ERBB2-220ENST00000584684 KDRP35968 1356 aa17.93■□□□□ 0.46
ERBB2-220ENST00000584684 SLC15A2Q16348 729 aa17.93■□□□□ 0.46
ERBB2-220ENST00000584684 LRRC4BQ9NT99 713 aa17.92■□□□□ 0.46
ERBB2-220ENST00000584684 SPON1Q9HCB6 807 aa17.91■□□□□ 0.46
ERBB2-220ENST00000584684 TUBGCP6Q96RT7 1819 aa17.91■□□□□ 0.46
ERBB2-220ENST00000584684 C5P01031 1676 aa17.9■□□□□ 0.46
ERBB2-220ENST00000584684 TAF1LQ8IZX4 1826 aa17.88■□□□□ 0.45
ERBB2-220ENST00000584684 PHKG2P15735 406 aa17.88■□□□□ 0.45
ERBB2-220ENST00000584684 IL13P35225 146 aa17.88■□□□□ 0.45
ERBB2-220ENST00000584684 ZNF827Q17R98 1081 aa17.88■□□□□ 0.45
ERBB2-220ENST00000584684 IFNL2Q8IZJ0 200 aa17.88■□□□□ 0.45
ERBB2-220ENST00000584684 AKT1S1Q96B36 256 aa17.88■□□□□ 0.45
ERBB2-220ENST00000584684 COL3A1P02461 1466 aaPredicted RBP17.88■□□□□ 0.45
ERBB2-220ENST00000584684 COL24A1Q17RW2 1714 aa17.87■□□□□ 0.45
ERBB2-220ENST00000584684 PALLDQ8WX93 1383 aa17.87■□□□□ 0.45
ERBB2-220ENST00000584684 MTHFSP49914 203 aa17.86■□□□□ 0.45
ERBB2-220ENST00000584684 AMOTQ4VCS5 1084 aa17.86■□□□□ 0.45
ERBB2-220ENST00000584684 CC2D1BQ5T0F9 858 aaKnown RBP17.86■□□□□ 0.45
ERBB2-220ENST00000584684 PDGFDQ9GZP0 370 aaPredicted RBP17.86■□□□□ 0.45
ERBB2-220ENST00000584684 HMGB2P26583 209 aaKnown RBP17.85■□□□□ 0.45
ERBB2-220ENST00000584684 SMARCC1Q92922 1105 aaPredicted RBP17.85■□□□□ 0.45
ERBB2-220ENST00000584684 CCNL1Q9UK58 526 aaPredicted RBP17.85■□□□□ 0.45
ERBB2-220ENST00000584684 ZNF831Q5JPB2 1677 aa17.84■□□□□ 0.45
ERBB2-220ENST00000584684 PLEKHO1Q53GL0 409 aaPredicted RBP17.84■□□□□ 0.45
ERBB2-220ENST00000584684 MPRIPQ6WCQ1 1025 aa17.84■□□□□ 0.45
ERBB2-220ENST00000584684 AEBP1Q8IUX7 1158 aa17.84■□□□□ 0.45
ERBB2-220ENST00000584684 MTFR1LQ9H019 292 aa17.84■□□□□ 0.45
ERBB2-220ENST00000584684 KDM6AO15550 1401 aaPredicted RBP17.83■□□□□ 0.45
ERBB2-220ENST00000584684 HSP90AB1P08238 724 aaKnown RBP17.83■□□□□ 0.44
ERBB2-220ENST00000584684 PIGBQ92521 554 aa17.83■□□□□ 0.44
ERBB2-220ENST00000584684 C4BP0C0L5 1744 aa17.82■□□□□ 0.44
ERBB2-220ENST00000584684 PTGER2P43116 358 aa17.82■□□□□ 0.44
ERBB2-220ENST00000584684 SULT6B1Q6IMI4 303 aa17.82■□□□□ 0.44
ERBB2-220ENST00000584684 DCAF5Q96JK2 942 aa17.82■□□□□ 0.44
ERBB2-220ENST00000584684 TMOD3Q9NYL9 352 aa17.82■□□□□ 0.44
ERBB2-220ENST00000584684 PNPLA7Q6ZV29 1317 aa17.81■□□□□ 0.44
ERBB2-220ENST00000584684 ERVV-2B6SEH9 535 aa17.81■□□□□ 0.44
ERBB2-220ENST00000584684 ZBTB7AO95365 584 aa17.81■□□□□ 0.44
ERBB2-220ENST00000584684 SGIP1Q9BQI5 828 aa17.81■□□□□ 0.44
ERBB2-220ENST00000584684 SCN11AQ9UI33 1791 aa17.81■□□□□ 0.44
ERBB2-220ENST00000584684 ADAMTS7Q9UKP4 1686 aa17.8■□□□□ 0.44
ERBB2-220ENST00000584684 KCNQ4P56696 695 aa17.8■□□□□ 0.44
ERBB2-220ENST00000584684 ZNF530Q6P9A1 599 aaPredicted RBP17.8■□□□□ 0.44
ERBB2-220ENST00000584684 SLC16A10Q8TF71 515 aa17.8■□□□□ 0.44
ERBB2-220ENST00000584684 DIAPH1O60610 1272 aaKnown RBP17.79■□□□□ 0.44
ERBB2-220ENST00000584684 PPP1R1BQ9UD71 204 aaPredicted RBP17.79■□□□□ 0.44
ERBB2-220ENST00000584684 MRC1P22897 1456 aa17.79■□□□□ 0.44
ERBB2-220ENST00000584684 CICQ96RK0 1608 aaPredicted RBP17.79■□□□□ 0.44
ERBB2-220ENST00000584684 UBR3Q6ZT12 1888 aa17.78■□□□□ 0.44
ERBB2-220ENST00000584684 TFCP2L1Q9NZI6 479 aa17.78■□□□□ 0.44
ERBB2-220ENST00000584684 C1orf141Q5JVX7 400 aa17.77■□□□□ 0.44
ERBB2-220ENST00000584684 MAP3K5Q99683 1374 aa17.77■□□□□ 0.43
ERBB2-220ENST00000584684 COL5A3P25940 1745 aaPredicted RBP17.76■□□□□ 0.43
ERBB2-220ENST00000584684 LOC102724428A0A0B4J2F2 783 aa17.76■□□□□ 0.43
ERBB2-220ENST00000584684 SIK1P57059 783 aa17.76■□□□□ 0.43
ERBB2-220ENST00000584684 ATF5Q9Y2D1 282 aaPredicted RBP17.76■□□□□ 0.43
ERBB2-220ENST00000584684 VIRMAQ69YN4 1812 aaKnown RBP17.76■□□□□ 0.43
ERBB2-220ENST00000584684 ASAP1Q9ULH1 1129 aa17.75■□□□□ 0.43
ERBB2-220ENST00000584684 AKAP4Q5JQC9 854 aa17.74■□□□□ 0.43
ERBB2-220ENST00000584684 ATG3Q9NT62 314 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms