RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 LMOD3Q0VAK6 560 aa22■■□□□ 1.11
CDK5RAP3-230ENST00000584042 AMOTQ4VCS5 1084 aa22■■□□□ 1.11
CDK5RAP3-230ENST00000584042 RRP7AQ9Y3A4 280 aaKnown RBP22■■□□□ 1.11
CDK5RAP3-230ENST00000584042 ADAMTS7Q9UKP4 1686 aa22■■□□□ 1.11
CDK5RAP3-230ENST00000584042 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.99■■□□□ 1.113e-14■■□□□ 11.9
CDK5RAP3-230ENST00000584042 SPATA31A1Q5TZJ5 1347 aa21.99■■□□□ 1.11
CDK5RAP3-230ENST00000584042 MTHFSDQ2M296 383 aaKnown RBP21.98■■□□□ 1.11
CDK5RAP3-230ENST00000584042 PLEKHO1Q53GL0 409 aaPredicted RBP21.98■■□□□ 1.11
CDK5RAP3-230ENST00000584042 THRAP3Q9Y2W1 955 aaKnown RBP21.98■■□□□ 1.11
CDK5RAP3-230ENST00000584042 SPATA31A5Q5VU36 1347 aa21.98■■□□□ 1.11
CDK5RAP3-230ENST00000584042 SPATA31A7Q8IWB4 1347 aa21.98■■□□□ 1.11
CDK5RAP3-230ENST00000584042 MAP3K5Q99683 1374 aa21.98■■□□□ 1.11
CDK5RAP3-230ENST00000584042 ATRNO75882 1429 aa21.97■■□□□ 1.11
CDK5RAP3-230ENST00000584042 VIRMAQ69YN4 1812 aaKnown RBP21.97■■□□□ 1.11
CDK5RAP3-230ENST00000584042 IL2RBP14784 551 aa21.97■■□□□ 1.11
CDK5RAP3-230ENST00000584042 RIPK4P57078 832 aa21.97■■□□□ 1.11
CDK5RAP3-230ENST00000584042 VPS72Q15906 364 aa21.97■■□□□ 1.11
CDK5RAP3-230ENST00000584042 AFF2P51816 1311 aa21.97■■□□□ 1.11
CDK5RAP3-230ENST00000584042 SENP3-EIF4A1A0A087X0R7 540 aa21.96■■□□□ 1.11
CDK5RAP3-230ENST00000584042 PDE3BQ13370 1112 aa21.96■■□□□ 1.11
CDK5RAP3-230ENST00000584042 NEUROD2Q15784 382 aa21.96■■□□□ 1.11
CDK5RAP3-230ENST00000584042 WWC1Q8IX03 1113 aa21.96■■□□□ 1.11
CDK5RAP3-230ENST00000584042 USP21Q9UK80 565 aa21.96■■□□□ 1.11
CDK5RAP3-230ENST00000584042 SALL2Q9Y467 1007 aaPredicted RBP21.96■■□□□ 1.11
CDK5RAP3-230ENST00000584042 TNS2Q63HR2 1409 aa21.96■■□□□ 1.11
CDK5RAP3-230ENST00000584042 THSD7AQ9UPZ6 1657 aa21.95■■□□□ 1.1
CDK5RAP3-230ENST00000584042 TRIM35Q9UPQ4 493 aa21.95■■□□□ 1.1
CDK5RAP3-230ENST00000584042 GLI3P10071 1580 aa21.95■■□□□ 1.1
CDK5RAP3-230ENST00000584042 CDCA7Q9BWT1 371 aaPredicted RBP21.94■■□□□ 1.1
CDK5RAP3-230ENST00000584042 ZNF530Q6P9A1 599 aaPredicted RBP21.93■■□□□ 1.1
CDK5RAP3-230ENST00000584042 SPG7Q9UQ90 795 aa21.93■■□□□ 1.1
CDK5RAP3-230ENST00000584042 SCN11AQ9UI33 1791 aa21.92■■□□□ 1.1
CDK5RAP3-230ENST00000584042 PCDH11XQ9BZA7 1347 aa21.92■■□□□ 1.1
CDK5RAP3-230ENST00000584042 PCDH11YQ9BZA8 1340 aa21.92■■□□□ 1.1
CDK5RAP3-230ENST00000584042 HTATSF1O43719 755 aaKnown RBP21.92■■□□□ 1.1
CDK5RAP3-230ENST00000584042 BARGINQ6ZT62 677 aa21.92■■□□□ 1.1
CDK5RAP3-230ENST00000584042 ILDR1Q86SU0 546 aaPredicted RBP21.92■■□□□ 1.1
CDK5RAP3-230ENST00000584042 WDR63Q8IWG1 891 aa21.92■■□□□ 1.1
CDK5RAP3-230ENST00000584042 USP35Q9P2H5 1018 aa21.92■■□□□ 1.1
CDK5RAP3-230ENST00000584042 IL16Q14005 1332 aa21.91■■□□□ 1.1
CDK5RAP3-230ENST00000584042 AKAP4Q5JQC9 854 aa21.91■■□□□ 1.1
CDK5RAP3-230ENST00000584042 GNAT3A8MTJ3 354 aa21.9■■□□□ 1.1
CDK5RAP3-230ENST00000584042 CENPBP07199 599 aaPredicted RBP21.9■■□□□ 1.1
CDK5RAP3-230ENST00000584042 CALD1Q05682 793 aaKnown RBP21.9■■□□□ 1.1
CDK5RAP3-230ENST00000584042 GOLGA2Q08379 1002 aa21.9■■□□□ 1.1
CDK5RAP3-230ENST00000584042 MRC1P22897 1456 aa21.9■■□□□ 1.1
CDK5RAP3-230ENST00000584042 C1orf141Q5JVX7 400 aa21.89■■□□□ 1.09
CDK5RAP3-230ENST00000584042 CCDC9Q9Y3X0 531 aaKnown RBP21.89■■□□□ 1.09
CDK5RAP3-230ENST00000584042 CEMIPQ8WUJ3 1361 aa21.88■■□□□ 1.09
CDK5RAP3-230ENST00000584042 ZCRB1Q8TBF4 217 aaKnown RBP21.88■■□□□ 1.09
CDK5RAP3-230ENST00000584042 RTF1Q92541 710 aaKnown RBP21.88■■□□□ 1.09
CDK5RAP3-230ENST00000584042 TRPC5Q9UL62 973 aaPredicted RBP21.88■■□□□ 1.09
CDK5RAP3-230ENST00000584042 SIPA1L3O60292 1781 aaPredicted RBP21.88■■□□□ 1.09
CDK5RAP3-230ENST00000584042 PHKG2P15735 406 aa21.87■■□□□ 1.09
CDK5RAP3-230ENST00000584042 KDM6AO15550 1401 aaPredicted RBP21.87■■□□□ 1.09
CDK5RAP3-230ENST00000584042 E9PSI1 815 aa21.86■■□□□ 1.09
CDK5RAP3-230ENST00000584042 IFNL2Q8IZJ0 200 aa21.86■■□□□ 1.09
CDK5RAP3-230ENST00000584042 TOGARAM1Q9Y4F4 1720 aa21.85■■□□□ 1.09
CDK5RAP3-230ENST00000584042 CYP27B1O15528 508 aa21.84■■□□□ 1.09
CDK5RAP3-230ENST00000584042 HSP90AB1P08238 724 aaKnown RBP21.84■■□□□ 1.09
CDK5RAP3-230ENST00000584042 SLFN5Q08AF3 891 aa21.83■■□□□ 1.09
CDK5RAP3-230ENST00000584042 ZNF772Q68DY9 489 aaPredicted RBP21.83■■□□□ 1.09
CDK5RAP3-230ENST00000584042 MCM10Q7L590 875 aa21.83■■□□□ 1.09
CDK5RAP3-230ENST00000584042 GJD4Q96KN9 370 aaPredicted RBP21.83■■□□□ 1.09
CDK5RAP3-230ENST00000584042 KDM3BQ7LBC6 1761 aa21.83■■□□□ 1.09
CDK5RAP3-230ENST00000584042 DCTN1Q14203 1278 aa21.82■■□□□ 1.08
CDK5RAP3-230ENST00000584042 TRMT2AQ8IZ69 625 aaKnown RBP21.82■■□□□ 1.08
CDK5RAP3-230ENST00000584042 CDCA7LQ96GN5 454 aa21.82■■□□□ 1.08
CDK5RAP3-230ENST00000584042 THUMPD2Q9BTF0 503 aaKnown RBP21.82■■□□□ 1.08
CDK5RAP3-230ENST00000584042 IFT57Q9NWB7 429 aa21.82■■□□□ 1.08
CDK5RAP3-230ENST00000584042 MYH16Q9H6N6 1097 aa21.81■■□□□ 1.08
CDK5RAP3-230ENST00000584042 RNMTO43148 476 aaKnown RBP21.8■■□□□ 1.08
CDK5RAP3-230ENST00000584042 NKX1-1Q15270 411 aaPredicted RBP21.8■■□□□ 1.08
CDK5RAP3-230ENST00000584042 DDB1Q16531 1140 aa21.8■■□□□ 1.08
CDK5RAP3-230ENST00000584042 FAM98CQ17RN3 349 aaKnown RBP21.8■■□□□ 1.08
CDK5RAP3-230ENST00000584042 DUSP27Q5VZP5 1158 aa21.8■■□□□ 1.08
CDK5RAP3-230ENST00000584042 IL17REQ8NFR9 667 aa21.8■■□□□ 1.08
CDK5RAP3-230ENST00000584042 DCAF5Q96JK2 942 aa21.8■■□□□ 1.08
CDK5RAP3-230ENST00000584042 SPINK5Q9NQ38 1064 aaPredicted RBP21.8■■□□□ 1.08
CDK5RAP3-230ENST00000584042 DOT1LQ8TEK3 1739 aa21.8■■□□□ 1.08
CDK5RAP3-230ENST00000584042 ZNF853P0CG23 659 aa21.79■■□□□ 1.08
CDK5RAP3-230ENST00000584042 GNAI1P63096 354 aa21.79■■□□□ 1.08
CDK5RAP3-230ENST00000584042 FANCIQ9NVI1 1328 aa21.79■■□□□ 1.08
CDK5RAP3-230ENST00000584042 PAPPAQ13219 1627 aa21.78■■□□□ 1.08
CDK5RAP3-230ENST00000584042 EXOC5O00471 708 aa21.78■■□□□ 1.08
CDK5RAP3-230ENST00000584042 MPRIPQ6WCQ1 1025 aa21.78■■□□□ 1.08
CDK5RAP3-230ENST00000584042 CFAP44Q96MT7 982 aa21.78■■□□□ 1.08
CDK5RAP3-230ENST00000584042 QTRT2Q9H974 415 aaKnown RBP21.77■■□□□ 1.08
CDK5RAP3-230ENST00000584042 BABAM1Q9NWV8 329 aa21.77■■□□□ 1.08
CDK5RAP3-230ENST00000584042 ONECUT3O60422 494 aaPredicted RBP21.75■■□□□ 1.07
CDK5RAP3-230ENST00000584042 LGR6Q9HBX8 967 aa21.75■■□□□ 1.07
CDK5RAP3-230ENST00000584042 ITGB4P16144 1822 aa21.74■■□□□ 1.07
CDK5RAP3-230ENST00000584042 TEFQ10587 303 aa21.74■■□□□ 1.07
CDK5RAP3-230ENST00000584042 DDX54Q8TDD1 881 aaKnown RBP21.74■■□□□ 1.07
CDK5RAP3-230ENST00000584042 CHL1O00533 1208 aa21.73■■□□□ 1.07
CDK5RAP3-230ENST00000584042 MBIPQ9NS73 344 aa21.73■■□□□ 1.07
CDK5RAP3-230ENST00000584042 ERVV-2B6SEH9 535 aa21.72■■□□□ 1.07
CDK5RAP3-230ENST00000584042 RBM6P78332 1123 aaKnown RBP21.72■■□□□ 1.07
CDK5RAP3-230ENST00000584042 SLC52A2Q9HAB3 445 aa21.72■■□□□ 1.07
CDK5RAP3-230ENST00000584042 BCL9O00512 1426 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms