RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-229ENST00000583697 KAT6BQ8WYB5 2073 aa12.11□□□□□ -0.47
CDK5RAP3-229ENST00000583697 C5P01031 1676 aa12.11□□□□□ -0.47
CDK5RAP3-229ENST00000583697 INSRP06213 1382 aa12.11□□□□□ -0.47
CDK5RAP3-229ENST00000583697 FYB1O15117 783 aa12.11□□□□□ -0.47
CDK5RAP3-229ENST00000583697 FBLN1P23142 703 aa12.11□□□□□ -0.47
CDK5RAP3-229ENST00000583697 RAPGEF4Q8WZA2 1011 aa12.11□□□□□ -0.47
CDK5RAP3-229ENST00000583697 CGNL1Q0VF96 1302 aa12.11□□□□□ -0.47
CDK5RAP3-229ENST00000583697 CLSPNQ9HAW4 1339 aa12.11□□□□□ -0.47
CDK5RAP3-229ENST00000583697 YY1P25490 414 aa12.1□□□□□ -0.47
CDK5RAP3-229ENST00000583697 SLC27A3Q5K4L6 730 aa12.1□□□□□ -0.47
CDK5RAP3-229ENST00000583697 ZCRB1Q8TBF4 217 aaKnown RBP12.1□□□□□ -0.47
CDK5RAP3-229ENST00000583697 TIMELESSQ9UNS1 1208 aa12.1□□□□□ -0.47
CDK5RAP3-229ENST00000583697 ATF5Q9Y2D1 282 aaPredicted RBP12.1□□□□□ -0.47
CDK5RAP3-229ENST00000583697 TOGARAM1Q9Y4F4 1720 aa12.09□□□□□ -0.47
CDK5RAP3-229ENST00000583697 NSD2O96028 1365 aa12.09□□□□□ -0.47
CDK5RAP3-229ENST00000583697 TATP17735 454 aaPredicted RBP12.09□□□□□ -0.47
CDK5RAP3-229ENST00000583697 PTGER2P43116 358 aa12.09□□□□□ -0.47
CDK5RAP3-229ENST00000583697 USHBP1Q8N6Y0 703 aa12.09□□□□□ -0.47
CDK5RAP3-229ENST00000583697 PCDH11XQ9BZA7 1347 aa12.09□□□□□ -0.47
CDK5RAP3-229ENST00000583697 PCDH11YQ9BZA8 1340 aa12.09□□□□□ -0.47
CDK5RAP3-229ENST00000583697 ZNF827Q17R98 1081 aa12.08□□□□□ -0.48
CDK5RAP3-229ENST00000583697 COL24A1Q17RW2 1714 aa12.08□□□□□ -0.48
CDK5RAP3-229ENST00000583697 PRIM1P49642 420 aaKnown RBP12.07□□□□□ -0.48
CDK5RAP3-229ENST00000583697 NBPF6Q5VWK0 638 aa12.07□□□□□ -0.48
CDK5RAP3-229ENST00000583697 NBPF4Q96M43 638 aa12.07□□□□□ -0.48
CDK5RAP3-229ENST00000583697 FHDC1Q9C0D6 1143 aaPredicted RBP12.07□□□□□ -0.48
CDK5RAP3-229ENST00000583697 LRRC4BQ9NT99 713 aa12.07□□□□□ -0.48
CDK5RAP3-229ENST00000583697 MAP2P11137 1827 aaKnown RBP12.07□□□□□ -0.48
CDK5RAP3-229ENST00000583697 ITGB4P16144 1822 aa12.07□□□□□ -0.48
CDK5RAP3-229ENST00000583697 HSP90AB2PQ58FF8 381 aa12.06□□□□□ -0.48
CDK5RAP3-229ENST00000583697 POLR3GLQ9BT43 218 aa12.06□□□□□ -0.48
CDK5RAP3-229ENST00000583697 TAF1LQ8IZX4 1826 aa12.06□□□□□ -0.48
CDK5RAP3-229ENST00000583697 PPM1GO15355 546 aaPredicted RBP12.05□□□□□ -0.48
CDK5RAP3-229ENST00000583697 AKT1S1Q96B36 256 aa12.05□□□□□ -0.48
CDK5RAP3-229ENST00000583697 ARXQ96QS3 562 aa12.05□□□□□ -0.48
CDK5RAP3-229ENST00000583697 TFCP2L1Q9NZI6 479 aa12.05□□□□□ -0.48
CDK5RAP3-229ENST00000583697 CCNL1Q9UK58 526 aaPredicted RBP12.05□□□□□ -0.48
CDK5RAP3-229ENST00000583697 PNPLA7Q6ZV29 1317 aa12.05□□□□□ -0.48
CDK5RAP3-229ENST00000583697 MAP3K5Q99683 1374 aa12.05□□□□□ -0.48
CDK5RAP3-229ENST00000583697 POLD1P28340 1107 aa12.04□□□□□ -0.48
CDK5RAP3-229ENST00000583697 KLHL34Q8N239 644 aa12.04□□□□□ -0.48
CDK5RAP3-229ENST00000583697 SLC16A10Q8TF71 515 aa12.04□□□□□ -0.48
CDK5RAP3-229ENST00000583697 SGIP1Q9BQI5 828 aa12.04□□□□□ -0.48
CDK5RAP3-229ENST00000583697 SYT17Q9BSW7 474 aa12.04□□□□□ -0.48
CDK5RAP3-229ENST00000583697 EMILIN1Q9Y6C2 1016 aa12.04□□□□□ -0.48
CDK5RAP3-229ENST00000583697 NCAPD2Q15021 1401 aa12.03□□□□□ -0.48
CDK5RAP3-229ENST00000583697 C4BP0C0L5 1744 aa12.03□□□□□ -0.48
CDK5RAP3-229ENST00000583697 CARD14Q9BXL6 1004 aa12.03□□□□□ -0.48
CDK5RAP3-229ENST00000583697 CHD4Q14839 1912 aa12.03□□□□□ -0.48
CDK5RAP3-229ENST00000583697 PALLDQ8WX93 1383 aa12.03□□□□□ -0.48
CDK5RAP3-229ENST00000583697 KCNQ4P56696 695 aa12.02□□□□□ -0.49
CDK5RAP3-229ENST00000583697 MSH5O43196 834 aa12.01□□□□□ -0.49
CDK5RAP3-229ENST00000583697 HMGB2P26583 209 aaKnown RBP12.01□□□□□ -0.49
CDK5RAP3-229ENST00000583697 EIF4G2P78344 907 aaKnown RBP eCLIP12.01□□□□□ -0.49
CDK5RAP3-229ENST00000583697 MPRIPQ6WCQ1 1025 aa12□□□□□ -0.49
CDK5RAP3-229ENST00000583697 SPG7Q9UQ90 795 aa12□□□□□ -0.49
CDK5RAP3-229ENST00000583697 WASHC2AQ641Q2 1341 aa12□□□□□ -0.49
CDK5RAP3-229ENST00000583697 CCER1Q8TC90 406 aaPredicted RBP11.99□□□□□ -0.49
CDK5RAP3-229ENST00000583697 UBR3Q6ZT12 1888 aa11.98□□□□□ -0.49
CDK5RAP3-229ENST00000583697 PLEKHG2Q9H7P9 1386 aa11.98□□□□□ -0.49
CDK5RAP3-229ENST00000583697 CYP27B1O15528 508 aa11.98□□□□□ -0.49
CDK5RAP3-229ENST00000583697 SMARCC1Q92922 1105 aaPredicted RBP11.98□□□□□ -0.49
CDK5RAP3-229ENST00000583697 UTRNP46939 3433 aa11.98□□□□□ -0.49
CDK5RAP3-229ENST00000583697 TNNT2P45379 298 aaPredicted RBP11.97□□□□□ -0.49
CDK5RAP3-229ENST00000583697 PELP1Q8IZL8 1130 aaKnown RBP11.97□□□□□ -0.49
CDK5RAP3-229ENST00000583697 AK7Q96M32 723 aa11.97□□□□□ -0.49
CDK5RAP3-229ENST00000583697 HSPA5P11021 654 aaKnown RBP11.96□□□□□ -0.49
CDK5RAP3-229ENST00000583697 GPR162Q16538 588 aa11.96□□□□□ -0.49
CDK5RAP3-229ENST00000583697 FLAD1Q8NFF5 587 aa11.96□□□□□ -0.49
CDK5RAP3-229ENST00000583697 TMOD3Q9NYL9 352 aa11.96□□□□□ -0.49
CDK5RAP3-229ENST00000583697 COL23A1Q86Y22 540 aaPredicted RBP11.95□□□□□ -0.5
CDK5RAP3-229ENST00000583697 IFNL2Q8IZJ0 200 aa11.95□□□□□ -0.5
CDK5RAP3-229ENST00000583697 EYA1Q99502 592 aa11.95□□□□□ -0.5
CDK5RAP3-229ENST00000583697 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.95□□□□□ -0.51e-14■■□□□ 11.8
CDK5RAP3-229ENST00000583697 POLKQ9UBT6 870 aa11.95□□□□□ -0.5
CDK5RAP3-229ENST00000583697 ZNF831Q5JPB2 1677 aa11.94□□□□□ -0.5
CDK5RAP3-229ENST00000583697 IGSF1Q8N6C5 1336 aa11.94□□□□□ -0.5
CDK5RAP3-229ENST00000583697 EIF4A2Q14240 407 aaKnown RBP11.94□□□□□ -0.5
CDK5RAP3-229ENST00000583697 MSL1Q68DK7 614 aa11.94□□□□□ -0.5
CDK5RAP3-229ENST00000583697 COL5A3P25940 1745 aaPredicted RBP11.94□□□□□ -0.5
CDK5RAP3-229ENST00000583697 PHF14O94880 888 aa11.93□□□□□ -0.5
CDK5RAP3-229ENST00000583697 PHKG2P15735 406 aa11.93□□□□□ -0.5
CDK5RAP3-229ENST00000583697 NKX1-1Q15270 411 aaPredicted RBP11.93□□□□□ -0.5
CDK5RAP3-229ENST00000583697 PANK3Q9H999 370 aa11.93□□□□□ -0.5
CDK5RAP3-229ENST00000583697 ZNF784Q8NCA9 323 aaPredicted RBP11.92□□□□□ -0.5
CDK5RAP3-229ENST00000583697 NLGN2Q8NFZ4 835 aa11.92□□□□□ -0.5
CDK5RAP3-229ENST00000583697 PIGBQ92521 554 aa11.92□□□□□ -0.5
CDK5RAP3-229ENST00000583697 LOC102724428A0A0B4J2F2 783 aa11.91□□□□□ -0.5
CDK5RAP3-229ENST00000583697 SSFA2P28290 1259 aa11.91□□□□□ -0.5
CDK5RAP3-229ENST00000583697 SIK1P57059 783 aa11.91□□□□□ -0.5
CDK5RAP3-229ENST00000583697 MORC1Q86VD1 984 aa11.91□□□□□ -0.5
CDK5RAP3-229ENST00000583697 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.9□□□□□ -0.5
CDK5RAP3-229ENST00000583697 HSP90AB1P08238 724 aaKnown RBP11.9□□□□□ -0.5
CDK5RAP3-229ENST00000583697 C4AP0C0L4 1744 aa11.9□□□□□ -0.5
CDK5RAP3-229ENST00000583697 KDRP35968 1356 aa11.9□□□□□ -0.5
CDK5RAP3-229ENST00000583697 GOLGB1Q14789 3259 aaKnown RBP11.89□□□□□ -0.51
CDK5RAP3-229ENST00000583697 KDM6AO15550 1401 aaPredicted RBP11.89□□□□□ -0.51
CDK5RAP3-229ENST00000583697 GNPATO15228 680 aa11.89□□□□□ -0.51
CDK5RAP3-229ENST00000583697 ATP6V1AP38606 617 aa11.89□□□□□ -0.51
CDK5RAP3-229ENST00000583697 LINC00116Q8NCU8 138 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms