RNA–Protein interactions for RNA: ENST00000583182.5

CDK5RAP3-226, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 709 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-226ENST00000583182 PRIM1P49642 420 aaKnown RBP20.9■□□□□ 0.94
CDK5RAP3-226ENST00000583182 SYTL4Q96C24 671 aaPredicted RBP20.9■□□□□ 0.94
CDK5RAP3-226ENST00000583182 TONSLQ96HA7 1378 aa20.89■□□□□ 0.93
CDK5RAP3-226ENST00000583182 COG3Q96JB2 828 aa20.89■□□□□ 0.93
CDK5RAP3-226ENST00000583182 MEGF6O75095 1541 aa20.88■□□□□ 0.93
CDK5RAP3-226ENST00000583182 KLHL34Q8N239 644 aa20.88■□□□□ 0.93
CDK5RAP3-226ENST00000583182 GOLGB1Q14789 3259 aaKnown RBP20.88■□□□□ 0.93
CDK5RAP3-226ENST00000583182 AMPHP49418 695 aa20.87■□□□□ 0.93
CDK5RAP3-226ENST00000583182 GPR162Q16538 588 aa20.87■□□□□ 0.93
CDK5RAP3-226ENST00000583182 ZCRB1Q8TBF4 217 aaKnown RBP20.87■□□□□ 0.93
CDK5RAP3-226ENST00000583182 TFCP2L1Q9NZI6 479 aa20.87■□□□□ 0.93
CDK5RAP3-226ENST00000583182 ST20-MTHFSA0A0A6YYL1 179 aa20.86■□□□□ 0.93
CDK5RAP3-226ENST00000583182 POLD1P28340 1107 aa20.86■□□□□ 0.93
CDK5RAP3-226ENST00000583182 C1QTNF8P60827 252 aa20.83■□□□□ 0.93
CDK5RAP3-226ENST00000583182 NBPF6Q5VWK0 638 aa20.83■□□□□ 0.93
CDK5RAP3-226ENST00000583182 NLGN2Q8NFZ4 835 aa20.83■□□□□ 0.93
CDK5RAP3-226ENST00000583182 NBPF4Q96M43 638 aa20.83■□□□□ 0.93
CDK5RAP3-226ENST00000583182 RRS1Q15050 365 aaKnown RBP20.82■□□□□ 0.92
CDK5RAP3-226ENST00000583182 CCNL1Q9UK58 526 aaPredicted RBP20.82■□□□□ 0.92
CDK5RAP3-226ENST00000583182 RTL1A6NKG5 1358 aa20.82■□□□□ 0.92
CDK5RAP3-226ENST00000583182 PELP1Q8IZL8 1130 aaKnown RBP20.81■□□□□ 0.92
CDK5RAP3-226ENST00000583182 USHBP1Q8N6Y0 703 aa20.81■□□□□ 0.92
CDK5RAP3-226ENST00000583182 SENP3-EIF4A1A0A087X0R7 540 aa20.8■□□□□ 0.92
CDK5RAP3-226ENST00000583182 FYB1O15117 783 aa20.79■□□□□ 0.92
CDK5RAP3-226ENST00000583182 COL23A1Q86Y22 540 aaPredicted RBP20.79■□□□□ 0.92
CDK5RAP3-226ENST00000583182 GGNBP2Q9H3C7 697 aa20.79■□□□□ 0.92
CDK5RAP3-226ENST00000583182 USP47Q96K76 1375 aa20.79■□□□□ 0.92
CDK5RAP3-226ENST00000583182 C5P01031 1676 aa20.77■□□□□ 0.92
CDK5RAP3-226ENST00000583182 CGNL1Q0VF96 1302 aa20.77■□□□□ 0.91
CDK5RAP3-226ENST00000583182 MSH5O43196 834 aa20.76■□□□□ 0.91
CDK5RAP3-226ENST00000583182 SLC24A1O60721 1099 aa20.76■□□□□ 0.91
CDK5RAP3-226ENST00000583182 RAPGEF4Q8WZA2 1011 aa20.76■□□□□ 0.91
CDK5RAP3-226ENST00000583182 TAF1LQ8IZX4 1826 aa20.76■□□□□ 0.91
CDK5RAP3-226ENST00000583182 YBX3P16989 372 aaKnown RBP eCLIP20.75■□□□□ 0.91
CDK5RAP3-226ENST00000583182 SMG6Q86US8 1419 aaKnown RBP20.75■□□□□ 0.91
CDK5RAP3-226ENST00000583182 KIF20BQ96Q89 1820 aa20.74■□□□□ 0.91
CDK5RAP3-226ENST00000583182 HSP90AB2PQ58FF8 381 aa20.74■□□□□ 0.91
CDK5RAP3-226ENST00000583182 MSL1Q68DK7 614 aa20.74■□□□□ 0.91
CDK5RAP3-226ENST00000583182 TATP17735 454 aaPredicted RBP20.73■□□□□ 0.91
CDK5RAP3-226ENST00000583182 TOGARAM1Q9Y4F4 1720 aa20.73■□□□□ 0.91
CDK5RAP3-226ENST00000583182 INSRP06213 1382 aa20.72■□□□□ 0.91
CDK5RAP3-226ENST00000583182 GIGYF1O75420 1035 aaPredicted RBP20.72■□□□□ 0.91
CDK5RAP3-226ENST00000583182 ITGB4P16144 1822 aa20.71■□□□□ 0.91
CDK5RAP3-226ENST00000583182 TMF1P82094 1093 aa20.71■□□□□ 0.91
CDK5RAP3-226ENST00000583182 PCDH11XQ9BZA7 1347 aa20.71■□□□□ 0.91
CDK5RAP3-226ENST00000583182 PCDH11YQ9BZA8 1340 aa20.71■□□□□ 0.91
CDK5RAP3-226ENST00000583182 PALLDQ8WX93 1383 aa20.71■□□□□ 0.91
CDK5RAP3-226ENST00000583182 FLT4P35916 1363 aa20.7■□□□□ 0.9
CDK5RAP3-226ENST00000583182 CYP27B1O15528 508 aa20.69■□□□□ 0.9
CDK5RAP3-226ENST00000583182 GRIN3BO60391 1043 aa20.69■□□□□ 0.9
CDK5RAP3-226ENST00000583182 MPRIPQ6WCQ1 1025 aa20.69■□□□□ 0.9
CDK5RAP3-226ENST00000583182 C4BP0C0L5 1744 aa20.68■□□□□ 0.9
CDK5RAP3-226ENST00000583182 PKD1L3Q7Z443 1732 aa20.68■□□□□ 0.9
CDK5RAP3-226ENST00000583182 KIF24Q5T7B8 1368 aa20.68■□□□□ 0.9
CDK5RAP3-226ENST00000583182 AMIGO3Q86WK7 504 aa20.67■□□□□ 0.9
CDK5RAP3-226ENST00000583182 UBR3Q6ZT12 1888 aa20.66■□□□□ 0.9
CDK5RAP3-226ENST00000583182 FLAD1Q8NFF5 587 aa20.65■□□□□ 0.9
CDK5RAP3-226ENST00000583182 CARD14Q9BXL6 1004 aa20.65■□□□□ 0.9
CDK5RAP3-226ENST00000583182 CD2APQ9Y5K6 639 aa20.65■□□□□ 0.9
CDK5RAP3-226ENST00000583182 EMILIN1Q9Y6C2 1016 aa20.65■□□□□ 0.9
CDK5RAP3-226ENST00000583182 MAP2P11137 1827 aaKnown RBP20.64■□□□□ 0.89
CDK5RAP3-226ENST00000583182 NCAPD2Q15021 1401 aa20.63■□□□□ 0.89
CDK5RAP3-226ENST00000583182 SMIM5Q71RC9 77 aa20.63■□□□□ 0.89
CDK5RAP3-226ENST00000583182 CEP350Q5VT06 3117 aa20.63■□□□□ 0.89
CDK5RAP3-226ENST00000583182 ATP10DQ9P241 1426 aa20.62■□□□□ 0.89
CDK5RAP3-226ENST00000583182 ANKRD26Q9UPS8 1709 aa20.62■□□□□ 0.89
CDK5RAP3-226ENST00000583182 HMGB2P26583 209 aaKnown RBP20.62■□□□□ 0.89
CDK5RAP3-226ENST00000583182 PIGBQ92521 554 aa20.62■□□□□ 0.89
CDK5RAP3-226ENST00000583182 SMARCC1Q92922 1105 aaPredicted RBP20.62■□□□□ 0.89
CDK5RAP3-226ENST00000583182 NSD3Q9BZ95 1437 aa20.61■□□□□ 0.89
CDK5RAP3-226ENST00000583182 CDCA8Q53HL2 280 aa20.61■□□□□ 0.89
CDK5RAP3-226ENST00000583182 AK7Q96M32 723 aa20.61■□□□□ 0.89
CDK5RAP3-226ENST00000583182 PHF14O94880 888 aa20.6■□□□□ 0.89
CDK5RAP3-226ENST00000583182 NKX1-1Q15270 411 aaPredicted RBP20.6■□□□□ 0.89
CDK5RAP3-226ENST00000583182 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.59■□□□□ 0.89
CDK5RAP3-226ENST00000583182 PPM1GO15355 546 aaPredicted RBP20.58■□□□□ 0.89
CDK5RAP3-226ENST00000583182 ADCY9O60503 1353 aa20.58■□□□□ 0.88
CDK5RAP3-226ENST00000583182 LINC00116Q8NCU8 138 aa20.57■□□□□ 0.88
CDK5RAP3-226ENST00000583182 SPG7Q9UQ90 795 aa20.57■□□□□ 0.88
CDK5RAP3-226ENST00000583182 WASHC2AQ641Q2 1341 aa20.56■□□□□ 0.88
CDK5RAP3-226ENST00000583182 IGSF1Q8N6C5 1336 aa20.56■□□□□ 0.88
CDK5RAP3-226ENST00000583182 LOC102724428A0A0B4J2F2 783 aa20.56■□□□□ 0.88
CDK5RAP3-226ENST00000583182 SIK1P57059 783 aa20.56■□□□□ 0.88
CDK5RAP3-226ENST00000583182 EYA1Q99502 592 aa20.56■□□□□ 0.88
CDK5RAP3-226ENST00000583182 WWC3Q9ULE0 1092 aa20.56■□□□□ 0.88
CDK5RAP3-226ENST00000583182 SSFA2P28290 1259 aa20.55■□□□□ 0.88
CDK5RAP3-226ENST00000583182 ITPK1Q13572 414 aa20.54■□□□□ 0.88
CDK5RAP3-226ENST00000583182 GPBP1L1Q9HC44 474 aaPredicted RBP20.54■□□□□ 0.88
CDK5RAP3-226ENST00000583182 ASAP1Q9ULH1 1129 aa20.54■□□□□ 0.88
CDK5RAP3-226ENST00000583182 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.53■□□□□ 0.883e-14■■□□□ 11.9
CDK5RAP3-226ENST00000583182 TMOD3Q9NYL9 352 aa20.53■□□□□ 0.88
CDK5RAP3-226ENST00000583182 PHKG2P15735 406 aa20.52■□□□□ 0.88
CDK5RAP3-226ENST00000583182 ZNF526Q8TF50 670 aaPredicted RBP20.52■□□□□ 0.88
CDK5RAP3-226ENST00000583182 GNPATO15228 680 aa20.51■□□□□ 0.87
CDK5RAP3-226ENST00000583182 POLKQ9UBT6 870 aa20.51■□□□□ 0.87
CDK5RAP3-226ENST00000583182 ATP6V1AP38606 617 aa20.5■□□□□ 0.87
CDK5RAP3-226ENST00000583182 IFNL2Q8IZJ0 200 aa20.5■□□□□ 0.87
CDK5RAP3-226ENST00000583182 ATG3Q9NT62 314 aa20.5■□□□□ 0.87
CDK5RAP3-226ENST00000583182 KIAA1551Q9HCM1 1747 aa20.48■□□□□ 0.87
CDK5RAP3-226ENST00000583182 KIF13BQ9NQT8 1826 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms