RNA–Protein interactions for RNA: ENST00000582486.5

GGA3-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5 BASIC

Gene GGA3, Length 2,319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-213ENST00000582486 ZKSCAN2Q63HK3 967 aa14.39□□□□□ -0.11
GGA3-213ENST00000582486 CHL1O00533 1208 aa14.38□□□□□ -0.11
GGA3-213ENST00000582486 ALDH1L2Q3SY69 923 aa14.38□□□□□ -0.11
GGA3-213ENST00000582486 C8orf58Q8NAV2 365 aa14.38□□□□□ -0.11
GGA3-213ENST00000582486 ANKRD24Q8TF21 1146 aa14.38□□□□□ -0.11
GGA3-213ENST00000582486 ZNF428Q96B54 188 aa14.38□□□□□ -0.11
GGA3-213ENST00000582486 NOB1Q9ULX3 412 aaKnown RBP14.38□□□□□ -0.11
GGA3-213ENST00000582486 CRB1P82279 1406 aa14.38□□□□□ -0.11
GGA3-213ENST00000582486 TWISTNBQ3B726 338 aaPredicted RBP14.37□□□□□ -0.11
GGA3-213ENST00000582486 RGPD2P0DJD1 1756 aa14.37□□□□□ -0.11
GGA3-213ENST00000582486 GNAT3A8MTJ3 354 aa14.37□□□□□ -0.11
GGA3-213ENST00000582486 HTATSF1O43719 755 aaKnown RBP14.36□□□□□ -0.11
GGA3-213ENST00000582486 TRIM27P14373 513 aa14.36□□□□□ -0.11
GGA3-213ENST00000582486 MIS18AQ9NYP9 233 aa14.36□□□□□ -0.11
GGA3-213ENST00000582486 DZIP1LQ8IYY4 767 aaKnown RBP14.36□□□□□ -0.11
GGA3-213ENST00000582486 ATF7IPQ6VMQ6 1270 aa14.35□□□□□ -0.11
GGA3-213ENST00000582486 FTSJ3Q8IY81 847 aaKnown RBP14.35□□□□□ -0.11
GGA3-213ENST00000582486 KRT24Q2M2I5 525 aa14.35□□□□□ -0.11
GGA3-213ENST00000582486 ERBB3P21860 1342 aa14.34□□□□□ -0.11
GGA3-213ENST00000582486 SOS2Q07890 1332 aaPredicted RBP14.34□□□□□ -0.11
GGA3-213ENST00000582486 KIF16BQ96L93 1317 aa14.34□□□□□ -0.11
GGA3-213ENST00000582486 TCERG1O14776 1098 aaKnown RBP14.34□□□□□ -0.11
GGA3-213ENST00000582486 BRPF1P55201 1214 aaPredicted RBP14.34□□□□□ -0.11
GGA3-213ENST00000582486 IL17REQ8NFR9 667 aa14.34□□□□□ -0.11
GGA3-213ENST00000582486 MAP3K5Q99683 1374 aa14.34□□□□□ -0.11
GGA3-213ENST00000582486 KDM2BQ8NHM5 1336 aa14.34□□□□□ -0.11
GGA3-213ENST00000582486 MS4A1P11836 297 aa14.33□□□□□ -0.11
GGA3-213ENST00000582486 MRPL50Q8N5N7 158 aaKnown RBP14.33□□□□□ -0.11
GGA3-213ENST00000582486 RGPD5Q99666 1765 aa14.33□□□□□ -0.11
GGA3-213ENST00000582486 IPO8O15397 1037 aaKnown RBP14.33□□□□□ -0.12
GGA3-213ENST00000582486 MVPQ14764 893 aaKnown RBP14.33□□□□□ -0.12
GGA3-213ENST00000582486 TSPYL4Q9UJ04 414 aa14.33□□□□□ -0.12
GGA3-213ENST00000582486 CHRNA2Q15822 529 aa14.32□□□□□ -0.12
GGA3-213ENST00000582486 NCAPD2Q15021 1401 aa14.32□□□□□ -0.12
GGA3-213ENST00000582486 CENPQQ7L2Z9 268 aaPredicted RBP14.32□□□□□ -0.12
GGA3-213ENST00000582486 KIAA0232Q92628 1395 aa14.31□□□□□ -0.12
GGA3-213ENST00000582486 PLEKHO1Q53GL0 409 aaPredicted RBP14.3□□□□□ -0.12
GGA3-213ENST00000582486 CRYBG1Q9Y4K1 1723 aa14.3□□□□□ -0.12
GGA3-213ENST00000582486 AAMPQ13685 434 aa14.3□□□□□ -0.12
GGA3-213ENST00000582486 AMOTQ4VCS5 1084 aa14.3□□□□□ -0.12
GGA3-213ENST00000582486 ITPRIPQ8IWB1 547 aa14.3□□□□□ -0.12
GGA3-213ENST00000582486 TMEM57Q8N5G2 664 aa14.3□□□□□ -0.12
GGA3-213ENST00000582486 NLRP2Q9NX02 1062 aa14.3□□□□□ -0.12
GGA3-213ENST00000582486 COL18A1P39060 1754 aa14.29□□□□□ -0.12
GGA3-213ENST00000582486 IGHDP01880 384 aa14.29□□□□□ -0.12
GGA3-213ENST00000582486 ZNF530Q6P9A1 599 aaPredicted RBP14.29□□□□□ -0.12
GGA3-213ENST00000582486 SKAP1Q86WV1 359 aa14.29□□□□□ -0.12
GGA3-213ENST00000582486 CPDO75976 1380 aa14.29□□□□□ -0.12
GGA3-213ENST00000582486 TAF7Q15545 349 aaPredicted RBP14.29□□□□□ -0.12
GGA3-213ENST00000582486 ARHGAP45Q92619 1136 aa14.29□□□□□ -0.12
GGA3-213ENST00000582486 ANP32EQ9BTT0 268 aa14.29□□□□□ -0.12
GGA3-213ENST00000582486 LGR6Q9HBX8 967 aa14.29□□□□□ -0.12
GGA3-213ENST00000582486 LRRC37A3O60309 1634 aa14.29□□□□□ -0.12
GGA3-213ENST00000582486 CAMTA1Q9Y6Y1 1673 aa14.28□□□□□ -0.12
GGA3-213ENST00000582486 CSB-PGBD3P0DP91 1061 aa14.28□□□□□ -0.12
GGA3-213ENST00000582486 HAP1P54257 671 aaPredicted RBP14.28□□□□□ -0.12
GGA3-213ENST00000582486 AKAP4Q5JQC9 854 aa14.28□□□□□ -0.12
GGA3-213ENST00000582486 RBM19Q9Y4C8 960 aaKnown RBP14.28□□□□□ -0.12
GGA3-213ENST00000582486 PCDHB15Q9Y5E8 787 aa14.28□□□□□ -0.12
GGA3-213ENST00000582486 DDX19BQ9UMR2 479 aa14.27□□□□□ -0.12
GGA3-213ENST00000582486 CEMIPQ8WUJ3 1361 aa14.27□□□□□ -0.12
GGA3-213ENST00000582486 MPRIPQ6WCQ1 1025 aa14.26□□□□□ -0.13
GGA3-213ENST00000582486 C1orf141Q5JVX7 400 aa14.26□□□□□ -0.13
GGA3-213ENST00000582486 BABAM1Q9NWV8 329 aa14.26□□□□□ -0.13
GGA3-213ENST00000582486 LMO7Q8WWI1 1683 aa14.26□□□□□ -0.13
GGA3-213ENST00000582486 RAPGEF4Q8WZA2 1011 aa14.25□□□□□ -0.13
GGA3-213ENST00000582486 PRDM11Q9NQV5 511 aa14.25□□□□□ -0.13
GGA3-213ENST00000582486 NHSL1Q5SYE7 1610 aa14.25□□□□□ -0.13
GGA3-213ENST00000582486 ABCC6O95255 1503 aa14.25□□□□□ -0.13
GGA3-213ENST00000582486 RNMTO43148 476 aaKnown RBP14.23□□□□□ -0.13
GGA3-213ENST00000582486 SLC4A2P04920 1241 aa14.23□□□□□ -0.13
GGA3-213ENST00000582486 TEFQ10587 303 aa14.23□□□□□ -0.13
GGA3-213ENST00000582486 API5Q9BZZ5 524 aaKnown RBP14.23□□□□□ -0.13
GGA3-213ENST00000582486 ZBTB40Q9NUA8 1239 aa14.23□□□□□ -0.13
GGA3-213ENST00000582486 ABCC4O15439 1325 aa14.23□□□□□ -0.13
GGA3-213ENST00000582486 TATP17735 454 aaPredicted RBP14.23□□□□□ -0.13
GGA3-213ENST00000582486 FAM208AQ9UK61 1670 aaKnown RBP14.22□□□□□ -0.13
GGA3-213ENST00000582486 LTBP4Q8N2S1 1624 aa14.22□□□□□ -0.13
GGA3-213ENST00000582486 MEGF6O75095 1541 aa14.21□□□□□ -0.13
GGA3-213ENST00000582486 ZBTB7BO15156 539 aaPredicted RBP14.21□□□□□ -0.13
GGA3-213ENST00000582486 BTBD11A6QL63 1104 aa14.2□□□□□ -0.14
GGA3-213ENST00000582486 NECTIN2Q92692 538 aa14.2□□□□□ -0.14
GGA3-213ENST00000582486 RWDD1Q9H446 243 aaPredicted RBP14.2□□□□□ -0.14
GGA3-213ENST00000582486 KCNQ3O43525 872 aa14.2□□□□□ -0.14
GGA3-213ENST00000582486 SPG7Q9UQ90 795 aa14.2□□□□□ -0.14
GGA3-213ENST00000582486 PTPRCP08575 1304 aa14.19□□□□□ -0.14
GGA3-213ENST00000582486 WDR17Q8IZU2 1322 aa14.19□□□□□ -0.14
GGA3-213ENST00000582486 EIF4A1P60842 406 aaKnown RBP14.19□□□□□ -0.14
GGA3-213ENST00000582486 CCDC30Q5VVM6 783 aa14.19□□□□□ -0.14
GGA3-213ENST00000582486 TOM1L2Q6ZVM7 507 aa14.19□□□□□ -0.14
GGA3-213ENST00000582486 G2E3Q7L622 706 aa14.19□□□□□ -0.14
GGA3-213ENST00000582486 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.19□□□□□ -0.142e-6■□□□□ 11
GGA3-213ENST00000582486 ABCA3Q99758 1704 aa14.19□□□□□ -0.14
GGA3-213ENST00000582486 ROBO1Q9Y6N7 1651 aa14.19□□□□□ -0.14
GGA3-213ENST00000582486 STK31Q9BXU1 1019 aa14.19□□□□□ -0.14
GGA3-213ENST00000582486 RGS12O14924 1447 aa14.19□□□□□ -0.14
GGA3-213ENST00000582486 SOS1Q07889 1333 aaPredicted RBP14.18□□□□□ -0.14
GGA3-213ENST00000582486 PHKG2P15735 406 aa14.18□□□□□ -0.14
GGA3-213ENST00000582486 RGS3P49796 1198 aa14.18□□□□□ -0.14
GGA3-213ENST00000582486 OVOS2A0A0G2JMS6 1433 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms