RNA–Protein interactions for RNA: ENST00000582040.1

CCDC57-214, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 330 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-214ENST00000582040 SYTL4Q96C24 671 aaPredicted RBP20.08■□□□□ 0.81
CCDC57-214ENST00000582040 NSD2O96028 1365 aa20.08■□□□□ 0.8
CCDC57-214ENST00000582040 NBPF6Q5VWK0 638 aa20.07■□□□□ 0.8
CCDC57-214ENST00000582040 NBPF4Q96M43 638 aa20.07■□□□□ 0.8
CCDC57-214ENST00000582040 NSD3Q9BZ95 1437 aa20.07■□□□□ 0.8
CCDC57-214ENST00000582040 LY75O60449 1722 aa20.07■□□□□ 0.8
CCDC57-214ENST00000582040 QSER1Q2KHR3 1735 aa20.07■□□□□ 0.8
CCDC57-214ENST00000582040 TUBGCP6Q96RT7 1819 aa20.06■□□□□ 0.8
CCDC57-214ENST00000582040 INSRP06213 1382 aa20.06■□□□□ 0.8
CCDC57-214ENST00000582040 FLT4P35916 1363 aa20.06■□□□□ 0.8
CCDC57-214ENST00000582040 PRIM1P49642 420 aaKnown RBP20.05■□□□□ 0.8
CCDC57-214ENST00000582040 SLC27A3Q5K4L6 730 aa20.05■□□□□ 0.8
CCDC57-214ENST00000582040 SGIP1Q9BQI5 828 aa20.05■□□□□ 0.8
CCDC57-214ENST00000582040 FHDC1Q9C0D6 1143 aaPredicted RBP20.04■□□□□ 0.8
CCDC57-214ENST00000582040 HSP90AB2PQ58FF8 381 aa20.03■□□□□ 0.8
CCDC57-214ENST00000582040 RAPGEF4Q8WZA2 1011 aa20.03■□□□□ 0.8
CCDC57-214ENST00000582040 AKT1S1Q96B36 256 aa20.03■□□□□ 0.8
CCDC57-214ENST00000582040 CARD14Q9BXL6 1004 aa20.03■□□□□ 0.8
CCDC57-214ENST00000582040 KIF24Q5T7B8 1368 aa20.03■□□□□ 0.8
CCDC57-214ENST00000582040 ANKRD26Q9UPS8 1709 aa20.02■□□□□ 0.8
CCDC57-214ENST00000582040 KCNQ4P56696 695 aa20.02■□□□□ 0.8
CCDC57-214ENST00000582040 CGNL1Q0VF96 1302 aa20.02■□□□□ 0.79
CCDC57-214ENST00000582040 TATP17735 454 aaPredicted RBP20.01■□□□□ 0.79
CCDC57-214ENST00000582040 SYT17Q9BSW7 474 aa20.01■□□□□ 0.79
CCDC57-214ENST00000582040 TIMELESSQ9UNS1 1208 aa20.01■□□□□ 0.79
CCDC57-214ENST00000582040 ARXQ96QS3 562 aa20■□□□□ 0.79
CCDC57-214ENST00000582040 EMILIN1Q9Y6C2 1016 aa20■□□□□ 0.79
CCDC57-214ENST00000582040 PNPLA7Q6ZV29 1317 aa20■□□□□ 0.79
CCDC57-214ENST00000582040 CLSPNQ9HAW4 1339 aa20■□□□□ 0.79
CCDC57-214ENST00000582040 PCDH11XQ9BZA7 1347 aa19.99■□□□□ 0.79
CCDC57-214ENST00000582040 PCDH11YQ9BZA8 1340 aa19.99■□□□□ 0.79
CCDC57-214ENST00000582040 PKD1L3Q7Z443 1732 aa19.99■□□□□ 0.79
CCDC57-214ENST00000582040 PCGF6Q9BYE7 350 aa19.98■□□□□ 0.79
CCDC57-214ENST00000582040 COL24A1Q17RW2 1714 aa19.98■□□□□ 0.79
CCDC57-214ENST00000582040 TOGARAM1Q9Y4F4 1720 aa19.98■□□□□ 0.79
CCDC57-214ENST00000582040 MAP3K5Q99683 1374 aa19.97■□□□□ 0.79
CCDC57-214ENST00000582040 CCNL1Q9UK58 526 aaPredicted RBP19.97■□□□□ 0.79
CCDC57-214ENST00000582040 NCAPD2Q15021 1401 aa19.96■□□□□ 0.79
CCDC57-214ENST00000582040 SLC16A10Q8TF71 515 aa19.96■□□□□ 0.79
CCDC57-214ENST00000582040 TFCP2L1Q9NZI6 479 aa19.96■□□□□ 0.79
CCDC57-214ENST00000582040 C5P01031 1676 aa19.96■□□□□ 0.79
CCDC57-214ENST00000582040 PPM1GO15355 546 aaPredicted RBP19.94■□□□□ 0.78
CCDC57-214ENST00000582040 POLR3GLQ9BT43 218 aa19.93■□□□□ 0.78
CCDC57-214ENST00000582040 MAP2P11137 1827 aaKnown RBP19.92■□□□□ 0.78
CCDC57-214ENST00000582040 CYP27B1O15528 508 aa19.92■□□□□ 0.78
CCDC57-214ENST00000582040 POLD1P28340 1107 aa19.92■□□□□ 0.78
CCDC57-214ENST00000582040 KLHL34Q8N239 644 aa19.92■□□□□ 0.78
CCDC57-214ENST00000582040 ITGB4P16144 1822 aa19.92■□□□□ 0.78
CCDC57-214ENST00000582040 PALLDQ8WX93 1383 aa19.92■□□□□ 0.78
CCDC57-214ENST00000582040 TAF1LQ8IZX4 1826 aa19.9■□□□□ 0.78
CCDC57-214ENST00000582040 WASHC2AQ641Q2 1341 aa19.9■□□□□ 0.78
CCDC57-214ENST00000582040 MPRIPQ6WCQ1 1025 aa19.89■□□□□ 0.77
CCDC57-214ENST00000582040 CHD4Q14839 1912 aa19.88■□□□□ 0.77
CCDC57-214ENST00000582040 MSH5O43196 834 aa19.87■□□□□ 0.77
CCDC57-214ENST00000582040 COL23A1Q86Y22 540 aaPredicted RBP19.87■□□□□ 0.77
CCDC57-214ENST00000582040 EYA1Q99502 592 aa19.87■□□□□ 0.77
CCDC57-214ENST00000582040 POLKQ9UBT6 870 aa19.87■□□□□ 0.77
CCDC57-214ENST00000582040 C4BP0C0L5 1744 aa19.86■□□□□ 0.77
CCDC57-214ENST00000582040 HSPA5P11021 654 aaKnown RBP19.85■□□□□ 0.77
CCDC57-214ENST00000582040 TNNT2P45379 298 aaPredicted RBP19.85■□□□□ 0.77
CCDC57-214ENST00000582040 EIF4G2P78344 907 aaKnown RBP eCLIP19.85■□□□□ 0.771e-7■□□□□ 8.4
CCDC57-214ENST00000582040 SPG7Q9UQ90 795 aa19.85■□□□□ 0.77
CCDC57-214ENST00000582040 MSL1Q68DK7 614 aa19.84■□□□□ 0.77
CCDC57-214ENST00000582040 NKX1-1Q15270 411 aaPredicted RBP19.83■□□□□ 0.77
CCDC57-214ENST00000582040 GPR162Q16538 588 aa19.83■□□□□ 0.77
CCDC57-214ENST00000582040 ZNF784Q8NCA9 323 aaPredicted RBP19.83■□□□□ 0.77
CCDC57-214ENST00000582040 NLGN2Q8NFZ4 835 aa19.83■□□□□ 0.77
CCDC57-214ENST00000582040 PIGBQ92521 554 aa19.83■□□□□ 0.77
CCDC57-214ENST00000582040 SMARCC1Q92922 1105 aaPredicted RBP19.83■□□□□ 0.77
CCDC57-214ENST00000582040 EIF4A2Q14240 407 aaKnown RBP19.82■□□□□ 0.76
CCDC57-214ENST00000582040 PELP1Q8IZL8 1130 aaKnown RBP19.82■□□□□ 0.76
CCDC57-214ENST00000582040 UTRNP46939 3433 aa19.81■□□□□ 0.76
CCDC57-214ENST00000582040 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.81■□□□□ 0.76
CCDC57-214ENST00000582040 UBR3Q6ZT12 1888 aa19.81■□□□□ 0.76
CCDC57-214ENST00000582040 AK7Q96M32 723 aa19.8■□□□□ 0.76
CCDC57-214ENST00000582040 PHKG2P15735 406 aa19.79■□□□□ 0.76
CCDC57-214ENST00000582040 HMGB2P26583 209 aaKnown RBP19.79■□□□□ 0.76
CCDC57-214ENST00000582040 FLAD1Q8NFF5 587 aa19.79■□□□□ 0.76
CCDC57-214ENST00000582040 CCER1Q8TC90 406 aaPredicted RBP19.79■□□□□ 0.76
CCDC57-214ENST00000582040 PANK3Q9H999 370 aa19.79■□□□□ 0.76
CCDC57-214ENST00000582040 TMOD3Q9NYL9 352 aa19.79■□□□□ 0.76
CCDC57-214ENST00000582040 PLEKHG2Q9H7P9 1386 aa19.79■□□□□ 0.76
CCDC57-214ENST00000582040 IGSF1Q8N6C5 1336 aa19.78■□□□□ 0.76
CCDC57-214ENST00000582040 AMIGO3Q86WK7 504 aa19.78■□□□□ 0.76
CCDC57-214ENST00000582040 IFNL2Q8IZJ0 200 aa19.78■□□□□ 0.76
CCDC57-214ENST00000582040 LOC102724428A0A0B4J2F2 783 aa19.76■□□□□ 0.75
CCDC57-214ENST00000582040 PHF14O94880 888 aa19.76■□□□□ 0.75
CCDC57-214ENST00000582040 SIK1P57059 783 aa19.76■□□□□ 0.75
CCDC57-214ENST00000582040 LINC00116Q8NCU8 138 aa19.75■□□□□ 0.75
CCDC57-214ENST00000582040 ASAP1Q9ULH1 1129 aa19.75■□□□□ 0.75
CCDC57-214ENST00000582040 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.74■□□□□ 0.75
CCDC57-214ENST00000582040 SMIM5Q71RC9 77 aa19.74■□□□□ 0.75
CCDC57-214ENST00000582040 YBX3P16989 372 aaKnown RBP eCLIP19.73■□□□□ 0.753e-7■■■■■ 40.2
CCDC57-214ENST00000582040 ITPK1Q13572 414 aa19.73■□□□□ 0.75
CCDC57-214ENST00000582040 KDRP35968 1356 aa19.72■□□□□ 0.75
CCDC57-214ENST00000582040 MORC1Q86VD1 984 aa19.72■□□□□ 0.75
CCDC57-214ENST00000582040 KDM6AO15550 1401 aaPredicted RBP19.71■□□□□ 0.75
CCDC57-214ENST00000582040 SSFA2P28290 1259 aa19.71■□□□□ 0.75
CCDC57-214ENST00000582040 ATP6V1AP38606 617 aa19.71■□□□□ 0.75
CCDC57-214ENST00000582040 ATG3Q9NT62 314 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms