RNA–Protein interactions for RNA: ENST00000581273.5

TVP23C-208, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 3

Gene TVP23C, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-208ENST00000581273 MTFR1LQ9H019 292 aa9.66□□□□□ -0.86
TVP23C-208ENST00000581273 SPATA31E1Q6ZUB1 1445 aa9.65□□□□□ -0.86
TVP23C-208ENST00000581273 ARHGEF10O15013 1369 aa9.65□□□□□ -0.86
TVP23C-208ENST00000581273 RGL2O15211 777 aa9.65□□□□□ -0.86
TVP23C-208ENST00000581273 FRAT1Q92837 279 aaPredicted RBP9.65□□□□□ -0.86
TVP23C-208ENST00000581273 MPHOSPH9Q99550 1183 aa9.65□□□□□ -0.86
TVP23C-208ENST00000581273 PIK3C2GO75747 1445 aa9.65□□□□□ -0.87
TVP23C-208ENST00000581273 SBNO1A3KN83 1393 aa9.64□□□□□ -0.87
TVP23C-208ENST00000581273 AATKQ6ZMQ8 1374 aa9.64□□□□□ -0.87
TVP23C-208ENST00000581273 HSP90AA1P07900 732 aaKnown RBP9.64□□□□□ -0.87
TVP23C-208ENST00000581273 NLGN2Q8NFZ4 835 aa9.64□□□□□ -0.87
TVP23C-208ENST00000581273 C14orf93Q9H972 538 aaKnown RBP9.64□□□□□ -0.87
TVP23C-208ENST00000581273 NRXN1Q9ULB1 1477 aa9.64□□□□□ -0.87
TVP23C-208ENST00000581273 BRD4O60885 1362 aaPredicted RBP9.63□□□□□ -0.87
TVP23C-208ENST00000581273 RASEFQ8IZ41 740 aa9.63□□□□□ -0.87
TVP23C-208ENST00000581273 COL14A1Q05707 1796 aaKnown RBP9.63□□□□□ -0.87
TVP23C-208ENST00000581273 MINK1Q8N4C8 1332 aaPredicted RBP9.62□□□□□ -0.87
TVP23C-208ENST00000581273 HSPA1AP0DMV8 641 aaKnown RBP9.62□□□□□ -0.87
TVP23C-208ENST00000581273 HSPA1BP0DMV9 641 aaKnown RBP9.62□□□□□ -0.87
TVP23C-208ENST00000581273 BECN1Q14457 450 aa9.62□□□□□ -0.87
TVP23C-208ENST00000581273 HSP90AA2PQ14568 343 aaPredicted RBP9.62□□□□□ -0.87
TVP23C-208ENST00000581273 RALBP1Q15311 655 aa9.62□□□□□ -0.87
TVP23C-208ENST00000581273 CHADLQ6NUI6 762 aa9.62□□□□□ -0.87
TVP23C-208ENST00000581273 CHRDL2Q6WN34 429 aa9.62□□□□□ -0.87
TVP23C-208ENST00000581273 SIRT1Q96EB6 747 aa9.62□□□□□ -0.87
TVP23C-208ENST00000581273 FAM212AQ96EL1 285 aa9.62□□□□□ -0.87
TVP23C-208ENST00000581273 RCAN3Q9UKA8 241 aa9.62□□□□□ -0.87
TVP23C-208ENST00000581273 ISY1Q9ULR0 285 aaKnown RBP9.62□□□□□ -0.87
TVP23C-208ENST00000581273 TRAK1Q9UPV9 953 aa9.62□□□□□ -0.87
TVP23C-208ENST00000581273 ADCY9O60503 1353 aa9.62□□□□□ -0.87
TVP23C-208ENST00000581273 GPRASP1Q5JY77 1395 aa9.62□□□□□ -0.87
TVP23C-208ENST00000581273 CHRNA2Q15822 529 aa9.61□□□□□ -0.87
TVP23C-208ENST00000581273 NGDNQ8NEJ9 315 aaKnown RBP9.61□□□□□ -0.87
TVP23C-208ENST00000581273 TMC1Q8TDI8 760 aa9.61□□□□□ -0.87
TVP23C-208ENST00000581273 PRDM11Q9NQV5 511 aa9.61□□□□□ -0.87
TVP23C-208ENST00000581273 STRN4Q9NRL3 753 aa9.61□□□□□ -0.87
TVP23C-208ENST00000581273 FARP1Q9Y4F1 1045 aaPredicted RBP9.61□□□□□ -0.87
TVP23C-208ENST00000581273 TRPM3Q9HCF6 1732 aaPredicted RBP9.61□□□□□ -0.87
TVP23C-208ENST00000581273 GRIN3BO60391 1043 aa9.6□□□□□ -0.87
TVP23C-208ENST00000581273 NUTM2GQ5VZR2 741 aa9.6□□□□□ -0.87
TVP23C-208ENST00000581273 CENPQQ7L2Z9 268 aaPredicted RBP9.6□□□□□ -0.87
TVP23C-208ENST00000581273 PNNQ9H307 717 aaKnown RBP9.6□□□□□ -0.87
TVP23C-208ENST00000581273 STK32BQ9NY57 414 aa9.6□□□□□ -0.87
TVP23C-208ENST00000581273 KDM2AQ9Y2K7 1162 aa9.6□□□□□ -0.87
TVP23C-208ENST00000581273 KIF7Q2M1P5 1343 aa9.59□□□□□ -0.87
TVP23C-208ENST00000581273 SPATA31A1Q5TZJ5 1347 aa9.59□□□□□ -0.87
TVP23C-208ENST00000581273 ALS2Q96Q42 1657 aa9.59□□□□□ -0.87
TVP23C-208ENST00000581273 CHRM1P11229 460 aaPredicted RBP9.59□□□□□ -0.87
TVP23C-208ENST00000581273 PRKAR2AP13861 404 aaKnown RBP9.59□□□□□ -0.87
TVP23C-208ENST00000581273 SLC15A2Q16348 729 aa9.59□□□□□ -0.87
TVP23C-208ENST00000581273 CCDC184Q52MB2 194 aa9.59□□□□□ -0.87
TVP23C-208ENST00000581273 DCAF8Q5TAQ9 597 aa9.59□□□□□ -0.87
TVP23C-208ENST00000581273 PTF1AQ7RTS3 328 aa9.59□□□□□ -0.87
TVP23C-208ENST00000581273 RGPD3A6NKT7 1758 aaPredicted RBP9.59□□□□□ -0.87
TVP23C-208ENST00000581273 RGPD4Q7Z3J3 1758 aa9.59□□□□□ -0.87
TVP23C-208ENST00000581273 PRR36Q9H6K5 1346 aa9.58□□□□□ -0.88
TVP23C-208ENST00000581273 ANKARQ7Z5J8 1434 aa9.58□□□□□ -0.88
TVP23C-208ENST00000581273 PLSCR1O15162 318 aa9.58□□□□□ -0.88
TVP23C-208ENST00000581273 EVA1CP58658 441 aa9.58□□□□□ -0.88
TVP23C-208ENST00000581273 ZC3H6P61129 1189 aaKnown RBP9.58□□□□□ -0.88
TVP23C-208ENST00000581273 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.58□□□□□ -0.88
TVP23C-208ENST00000581273 PNISRQ8TF01 805 aaKnown RBP9.58□□□□□ -0.88
TVP23C-208ENST00000581273 TPM2P07951 284 aa9.57□□□□□ -0.88
TVP23C-208ENST00000581273 CLCN1P35523 988 aa9.57□□□□□ -0.88
TVP23C-208ENST00000581273 VSIG10Q8N0Z9 540 aa9.57□□□□□ -0.88
TVP23C-208ENST00000581273 RNF25Q96BH1 459 aaPredicted RBP9.57□□□□□ -0.88
TVP23C-208ENST00000581273 KIAA0232Q92628 1395 aa9.57□□□□□ -0.88
TVP23C-208ENST00000581273 MYBBP1AQ9BQG0 1328 aaKnown RBP9.56□□□□□ -0.88
TVP23C-208ENST00000581273 CENPJQ9HC77 1338 aaPredicted RBP9.56□□□□□ -0.88
TVP23C-208ENST00000581273 WASLO00401 505 aaPredicted RBP9.56□□□□□ -0.88
TVP23C-208ENST00000581273 TOMM70O94826 608 aa9.56□□□□□ -0.88
TVP23C-208ENST00000581273 PIP4P2Q8N4L2 257 aa9.56□□□□□ -0.88
TVP23C-208ENST00000581273 EXOC6Q8TAG9 804 aa9.56□□□□□ -0.88
TVP23C-208ENST00000581273 ZMYND15Q9H091 742 aa9.56□□□□□ -0.88
TVP23C-208ENST00000581273 SBF2Q86WG5 1849 aa9.56□□□□□ -0.88
TVP23C-208ENST00000581273 CRYBG1Q9Y4K1 1723 aa9.56□□□□□ -0.88
TVP23C-208ENST00000581273 EIF3AQ14152 1382 aaKnown RBP9.55□□□□□ -0.88
TVP23C-208ENST00000581273 ZBTB7CA1YPR0 619 aa9.55□□□□□ -0.88
TVP23C-208ENST00000581273 PLCB2Q00722 1185 aa9.55□□□□□ -0.88
TVP23C-208ENST00000581273 DCAF11Q8TEB1 546 aa9.55□□□□□ -0.88
TVP23C-208ENST00000581273 L3MBTL2Q969R5 705 aa9.55□□□□□ -0.88
TVP23C-208ENST00000581273 NAP1L5Q96NT1 182 aaPredicted RBP9.55□□□□□ -0.88
TVP23C-208ENST00000581273 MAP7D2Q96T17 732 aa9.55□□□□□ -0.88
TVP23C-208ENST00000581273 PTMSP20962 102 aa9.54□□□□□ -0.88
TVP23C-208ENST00000581273 MLLT1Q03111 559 aaPredicted RBP9.54□□□□□ -0.88
TVP23C-208ENST00000581273 NUDT16Q96DE0 195 aaKnown RBP9.54□□□□□ -0.88
TVP23C-208ENST00000581273 TULP4Q9NRJ4 1543 aa9.54□□□□□ -0.88
TVP23C-208ENST00000581273 ITSN1Q15811 1721 aa9.53□□□□□ -0.88
TVP23C-208ENST00000581273 PHRF1Q9P1Y6 1649 aaKnown RBP9.53□□□□□ -0.88
TVP23C-208ENST00000581273 GOLGA6L3A6NEY3 463 aa9.53□□□□□ -0.88
TVP23C-208ENST00000581273 KIAA1210Q9ULL0 1709 aa9.53□□□□□ -0.88
TVP23C-208ENST00000581273 KAT6BQ8WYB5 2073 aa9.52□□□□□ -0.88
TVP23C-208ENST00000581273 ADGRB1O14514 1584 aa9.52□□□□□ -0.89
TVP23C-208ENST00000581273 LARP1Q6PKG0 1096 aaKnown RBP9.52□□□□□ -0.89
TVP23C-208ENST00000581273 BBXQ8WY36 941 aaPredicted RBP9.52□□□□□ -0.89
TVP23C-208ENST00000581273 CDK19Q9BWU1 502 aa9.52□□□□□ -0.89
TVP23C-208ENST00000581273 TXNRD1Q16881 649 aa9.51□□□□□ -0.89
TVP23C-208ENST00000581273 NLRP13Q86W25 1043 aa9.51□□□□□ -0.89
TVP23C-208ENST00000581273 ABTB2Q8N961 1025 aa9.51□□□□□ -0.89
TVP23C-208ENST00000581273 PDCL3Q9H2J4 239 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms