RNA–Protein interactions for RNA: ENST00000581204.1

SUPT4H1-206, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT4H1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-206ENST00000581204 SEC24BO95487 1268 aa11.85□□□□□ -0.51
SUPT4H1-206ENST00000581204 PDGFDQ9GZP0 370 aaPredicted RBP11.85□□□□□ -0.51
SUPT4H1-206ENST00000581204 ANO8Q9HCE9 1232 aaPredicted RBP11.85□□□□□ -0.51
SUPT4H1-206ENST00000581204 TRPM3Q9HCF6 1732 aaPredicted RBP11.85□□□□□ -0.51
SUPT4H1-206ENST00000581204 RGPD8O14715 1765 aaPredicted RBP11.84□□□□□ -0.51
SUPT4H1-206ENST00000581204 ARHGEF10O15013 1369 aa11.84□□□□□ -0.51
SUPT4H1-206ENST00000581204 PLEKHH1Q9ULM0 1364 aa11.84□□□□□ -0.51
SUPT4H1-206ENST00000581204 KIF3CO14782 793 aa11.84□□□□□ -0.51
SUPT4H1-206ENST00000581204 PLPP6Q8IY26 295 aa11.84□□□□□ -0.51
SUPT4H1-206ENST00000581204 STAC3Q96MF2 364 aa11.84□□□□□ -0.51
SUPT4H1-206ENST00000581204 ALS2Q96Q42 1657 aa11.84□□□□□ -0.51
SUPT4H1-206ENST00000581204 KNDC1Q76NI1 1749 aa11.83□□□□□ -0.52
SUPT4H1-206ENST00000581204 DPYSL4O14531 572 aa11.83□□□□□ -0.52
SUPT4H1-206ENST00000581204 SLC39A7Q92504 469 aa11.83□□□□□ -0.52
SUPT4H1-206ENST00000581204 SPATA31A1Q5TZJ5 1347 aa11.83□□□□□ -0.52
SUPT4H1-206ENST00000581204 IFT172Q9UG01 1749 aa11.83□□□□□ -0.52
SUPT4H1-206ENST00000581204 DLC1Q96QB1 1528 aa11.82□□□□□ -0.52
SUPT4H1-206ENST00000581204 C2orf72A6NCS6 295 aa11.82□□□□□ -0.52
SUPT4H1-206ENST00000581204 TMEM132AQ24JP5 1023 aa11.82□□□□□ -0.52
SUPT4H1-206ENST00000581204 SYT17Q9BSW7 474 aa11.82□□□□□ -0.52
SUPT4H1-206ENST00000581204 EMILIN3Q9NT22 766 aa11.82□□□□□ -0.52
SUPT4H1-206ENST00000581204 PPLO60437 1756 aa11.82□□□□□ -0.52
SUPT4H1-206ENST00000581204 ZMYND10O75800 440 aa11.81□□□□□ -0.52
SUPT4H1-206ENST00000581204 WAPLQ7Z5K2 1190 aa11.81□□□□□ -0.52
SUPT4H1-206ENST00000581204 FHDC1Q9C0D6 1143 aaPredicted RBP11.81□□□□□ -0.52
SUPT4H1-206ENST00000581204 GOLGB1Q14789 3259 aaKnown RBP11.8□□□□□ -0.52
SUPT4H1-206ENST00000581204 EIF4G2P78344 907 aaKnown RBP eCLIP11.8□□□□□ -0.52
SUPT4H1-206ENST00000581204 RPGRIP1LQ68CZ1 1315 aa11.8□□□□□ -0.52
SUPT4H1-206ENST00000581204 PEAK1Q9H792 1746 aa11.8□□□□□ -0.52
SUPT4H1-206ENST00000581204 ROCK2O75116 1388 aaKnown RBP11.79□□□□□ -0.52
SUPT4H1-206ENST00000581204 ZBTB7AO95365 584 aa11.79□□□□□ -0.52
SUPT4H1-206ENST00000581204 C7P10643 843 aa11.79□□□□□ -0.52
SUPT4H1-206ENST00000581204 PSME1Q06323 249 aa11.79□□□□□ -0.52
SUPT4H1-206ENST00000581204 GPIHBP1Q8IV16 184 aa11.79□□□□□ -0.52
SUPT4H1-206ENST00000581204 HIRIP3Q9BW71 556 aaPredicted RBP11.79□□□□□ -0.52
SUPT4H1-206ENST00000581204 CARD11Q9BXL7 1154 aa11.79□□□□□ -0.52
SUPT4H1-206ENST00000581204 HSPA5P11021 654 aaKnown RBP11.78□□□□□ -0.52
SUPT4H1-206ENST00000581204 TRPM1Q7Z4N2 1603 aa11.78□□□□□ -0.52
SUPT4H1-206ENST00000581204 MAP3K9P80192 1104 aa11.77□□□□□ -0.53
SUPT4H1-206ENST00000581204 MAP3K5Q99683 1374 aa11.77□□□□□ -0.53
SUPT4H1-206ENST00000581204 MLLT3P42568 568 aaPredicted RBP11.76□□□□□ -0.53
SUPT4H1-206ENST00000581204 PARP4Q9UKK3 1724 aaKnown RBP11.75□□□□□ -0.53
SUPT4H1-206ENST00000581204 BARGINQ6ZT62 677 aa11.75□□□□□ -0.53
SUPT4H1-206ENST00000581204 ADGRF5Q8IZF2 1346 aa11.75□□□□□ -0.53
SUPT4H1-206ENST00000581204 ABCC11Q96J66 1382 aa11.75□□□□□ -0.53
SUPT4H1-206ENST00000581204 USP47Q96K76 1375 aa11.75□□□□□ -0.53
SUPT4H1-206ENST00000581204 SBF2Q86WG5 1849 aa11.74□□□□□ -0.53
SUPT4H1-206ENST00000581204 NBPF1Q3BBV0 1214 aa11.74□□□□□ -0.53
SUPT4H1-206ENST00000581204 DIEXFQ68CQ4 756 aaKnown RBP11.73□□□□□ -0.53
SUPT4H1-206ENST00000581204 ERICH6Q7L0X2 663 aa11.73□□□□□ -0.53
SUPT4H1-206ENST00000581204 SLC24A3Q9HC58 644 aa11.73□□□□□ -0.53
SUPT4H1-206ENST00000581204 PHRF1Q9P1Y6 1649 aaKnown RBP11.73□□□□□ -0.53
SUPT4H1-206ENST00000581204 KIAA1210Q9ULL0 1709 aa11.73□□□□□ -0.53
SUPT4H1-206ENST00000581204 PLSCR1O15162 318 aa11.72□□□□□ -0.53
SUPT4H1-206ENST00000581204 RBM26Q5T8P6 1007 aaKnown RBP11.72□□□□□ -0.53
SUPT4H1-206ENST00000581204 C3orf67Q6ZVT6 689 aa11.72□□□□□ -0.53
SUPT4H1-206ENST00000581204 STK26Q9P289 416 aa11.72□□□□□ -0.53
SUPT4H1-206ENST00000581204 SSH2Q76I76 1423 aa11.71□□□□□ -0.53
SUPT4H1-206ENST00000581204 GPRASP1Q5JY77 1395 aa11.71□□□□□ -0.53
SUPT4H1-206ENST00000581204 KIAA0232Q92628 1395 aa11.71□□□□□ -0.53
SUPT4H1-206ENST00000581204 TBC1D12O60347 775 aa11.71□□□□□ -0.53
SUPT4H1-206ENST00000581204 HSPA6P17066 643 aa11.71□□□□□ -0.53
SUPT4H1-206ENST00000581204 BRPF1P55201 1214 aaPredicted RBP11.71□□□□□ -0.53
SUPT4H1-206ENST00000581204 PDE3BQ13370 1112 aa11.71□□□□□ -0.53
SUPT4H1-206ENST00000581204 CFAP70Q5T0N1 1121 aa11.71□□□□□ -0.53
SUPT4H1-206ENST00000581204 POTEHQ6S545 545 aa11.71□□□□□ -0.53
SUPT4H1-206ENST00000581204 PTF1AQ7RTS3 328 aa11.71□□□□□ -0.53
SUPT4H1-206ENST00000581204 DAXXQ9UER7 740 aaPredicted RBP11.71□□□□□ -0.53
SUPT4H1-206ENST00000581204 COLQQ9Y215 455 aaPredicted RBP11.71□□□□□ -0.53
SUPT4H1-206ENST00000581204 PELP1Q8IZL8 1130 aaKnown RBP11.7□□□□□ -0.54
SUPT4H1-206ENST00000581204 OXER1Q8TDS5 423 aa11.7□□□□□ -0.54
SUPT4H1-206ENST00000581204 PRDM11Q9NQV5 511 aa11.7□□□□□ -0.54
SUPT4H1-206ENST00000581204 LMO7Q8WWI1 1683 aa11.7□□□□□ -0.54
SUPT4H1-206ENST00000581204 LRRC37A3O60309 1634 aa11.7□□□□□ -0.54
SUPT4H1-206ENST00000581204 PIK3C2GO75747 1445 aa11.69□□□□□ -0.54
SUPT4H1-206ENST00000581204 ANKARQ7Z5J8 1434 aa11.69□□□□□ -0.54
SUPT4H1-206ENST00000581204 NEUROD2Q15784 382 aa11.69□□□□□ -0.54
SUPT4H1-206ENST00000581204 CHRNA2Q15822 529 aa11.69□□□□□ -0.54
SUPT4H1-206ENST00000581204 PMFBP1Q8TBY8 1022 aa11.69□□□□□ -0.54
SUPT4H1-206ENST00000581204 AK7Q96M32 723 aa11.69□□□□□ -0.54
SUPT4H1-206ENST00000581204 MTFR1LQ9H019 292 aa11.69□□□□□ -0.54
SUPT4H1-206ENST00000581204 C14orf93Q9H972 538 aaKnown RBP11.69□□□□□ -0.54
SUPT4H1-206ENST00000581204 STRN4Q9NRL3 753 aa11.69□□□□□ -0.54
SUPT4H1-206ENST00000581204 METRNQ9UJH8 293 aa11.69□□□□□ -0.54
SUPT4H1-206ENST00000581204 ATP7BP35670 1465 aa11.69□□□□□ -0.54
SUPT4H1-206ENST00000581204 OVOS2A0A0G2JMS6 1433 aa11.69□□□□□ -0.54
SUPT4H1-206ENST00000581204 OVOS2A0A0J9YW53 1432 aa11.69□□□□□ -0.54
SUPT4H1-206ENST00000581204 OVOS2Q6IE36 1432 aa11.69□□□□□ -0.54
SUPT4H1-206ENST00000581204 YTHDC2Q9H6S0 1430 aaKnown RBP11.69□□□□□ -0.54
SUPT4H1-206ENST00000581204 PAPPAQ13219 1627 aa11.68□□□□□ -0.54
SUPT4H1-206ENST00000581204 ST20-MTHFSA0A0A6YYL1 179 aa11.68□□□□□ -0.54
SUPT4H1-206ENST00000581204 USP35Q9P2H5 1018 aa11.68□□□□□ -0.54
SUPT4H1-206ENST00000581204 SLC34A2O95436 690 aa11.67□□□□□ -0.54
SUPT4H1-206ENST00000581204 TMEM132EQ6IEE7 984 aa11.67□□□□□ -0.54
SUPT4H1-206ENST00000581204 KRI1Q8N9T8 703 aaKnown RBP11.67□□□□□ -0.54
SUPT4H1-206ENST00000581204 ARXQ96QS3 562 aa11.67□□□□□ -0.54
SUPT4H1-206ENST00000581204 ATP10DQ9P241 1426 aa11.67□□□□□ -0.54
SUPT4H1-206ENST00000581204 EIF3AQ14152 1382 aaKnown RBP11.67□□□□□ -0.54
SUPT4H1-206ENST00000581204 COL24A1Q17RW2 1714 aa11.66□□□□□ -0.54
SUPT4H1-206ENST00000581204 DDX10Q13206 875 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms