RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 MORC1Q86VD1 984 aa13.43□□□□□ -0.26
GGA3-209ENST00000580646 PROM2Q8N271 834 aa13.43□□□□□ -0.26
GGA3-209ENST00000580646 PPM1GO15355 546 aaPredicted RBP13.42□□□□□ -0.26
GGA3-209ENST00000580646 USHBP1Q8N6Y0 703 aa13.42□□□□□ -0.26
GGA3-209ENST00000580646 ZCRB1Q8TBF4 217 aaKnown RBP13.42□□□□□ -0.26
GGA3-209ENST00000580646 RGPD2P0DJD1 1756 aa13.41□□□□□ -0.26
GGA3-209ENST00000580646 SBF2Q86WG5 1849 aa13.41□□□□□ -0.26
GGA3-209ENST00000580646 TXNRD1Q16881 649 aa13.4□□□□□ -0.26
GGA3-209ENST00000580646 CC2D1BQ5T0F9 858 aaKnown RBP13.4□□□□□ -0.26
GGA3-209ENST00000580646 RAPGEF4Q8WZA2 1011 aa13.4□□□□□ -0.26
GGA3-209ENST00000580646 POLKQ9UBT6 870 aa13.4□□□□□ -0.26
GGA3-209ENST00000580646 TATP17735 454 aaPredicted RBP13.39□□□□□ -0.27
GGA3-209ENST00000580646 TNNT2P45379 298 aaPredicted RBP13.39□□□□□ -0.27
GGA3-209ENST00000580646 RREB1Q92766 1687 aa13.39□□□□□ -0.27
GGA3-209ENST00000580646 MEGF6O75095 1541 aa13.39□□□□□ -0.27
GGA3-209ENST00000580646 ANO8Q9HCE9 1232 aaPredicted RBP13.38□□□□□ -0.27
GGA3-209ENST00000580646 NUP188Q5SRE5 1749 aa13.37□□□□□ -0.27
GGA3-209ENST00000580646 PRIM1P49642 420 aaKnown RBP13.37□□□□□ -0.27
GGA3-209ENST00000580646 RALBP1Q15311 655 aa13.36□□□□□ -0.27
GGA3-209ENST00000580646 SYTL4Q96C24 671 aaPredicted RBP13.36□□□□□ -0.27
GGA3-209ENST00000580646 NCAPD2Q15021 1401 aa13.36□□□□□ -0.27
GGA3-209ENST00000580646 RGPD3A6NKT7 1758 aaPredicted RBP13.35□□□□□ -0.27
GGA3-209ENST00000580646 RGPD4Q7Z3J3 1758 aa13.35□□□□□ -0.27
GGA3-209ENST00000580646 EYA1Q99502 592 aa13.35□□□□□ -0.27
GGA3-209ENST00000580646 STK32BQ9NY57 414 aa13.35□□□□□ -0.27
GGA3-209ENST00000580646 NHSQ6T4R5 1651 aa13.34□□□□□ -0.27
GGA3-209ENST00000580646 PLEKHG2Q9H7P9 1386 aa13.34□□□□□ -0.27
GGA3-209ENST00000580646 SLC15A2Q16348 729 aa13.34□□□□□ -0.27
GGA3-209ENST00000580646 COL3A1P02461 1466 aaPredicted RBP13.34□□□□□ -0.27
GGA3-209ENST00000580646 PPP2R1AP30153 589 aa13.33□□□□□ -0.28
GGA3-209ENST00000580646 MTHFSP49914 203 aa13.33□□□□□ -0.28
GGA3-209ENST00000580646 EIF4A2Q14240 407 aaKnown RBP13.33□□□□□ -0.28
GGA3-209ENST00000580646 IFFO2Q5TF58 517 aa13.33□□□□□ -0.28
GGA3-209ENST00000580646 SPON1Q9HCB6 807 aa13.33□□□□□ -0.28
GGA3-209ENST00000580646 PCDH11XQ9BZA7 1347 aa13.33□□□□□ -0.28
GGA3-209ENST00000580646 PCDH11YQ9BZA8 1340 aa13.33□□□□□ -0.28
GGA3-209ENST00000580646 CYP27B1O15528 508 aa13.32□□□□□ -0.28
GGA3-209ENST00000580646 LRRC4BQ9NT99 713 aa13.32□□□□□ -0.28
GGA3-209ENST00000580646 SLC27A3Q5K4L6 730 aa13.31□□□□□ -0.28
GGA3-209ENST00000580646 PDGFDQ9GZP0 370 aaPredicted RBP13.31□□□□□ -0.28
GGA3-209ENST00000580646 PRKRIP1Q9H875 184 aaPredicted RBP13.31□□□□□ -0.28
GGA3-209ENST00000580646 SPG7Q9UQ90 795 aa13.31□□□□□ -0.28
GGA3-209ENST00000580646 PKD1L3Q7Z443 1732 aa13.3□□□□□ -0.28
GGA3-209ENST00000580646 KAT6BQ8WYB5 2073 aa13.3□□□□□ -0.28
GGA3-209ENST00000580646 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.3□□□□□ -0.28
GGA3-209ENST00000580646 MYBBP1AQ9BQG0 1328 aaKnown RBP13.3□□□□□ -0.28
GGA3-209ENST00000580646 SHANK3Q9BYB0 1731 aa13.3□□□□□ -0.28
GGA3-209ENST00000580646 CFAP53Q96M91 514 aa13.29□□□□□ -0.28
GGA3-209ENST00000580646 IGSF1Q8N6C5 1336 aa13.29□□□□□ -0.28
GGA3-209ENST00000580646 BTAF1O14981 1849 aa13.29□□□□□ -0.28
GGA3-209ENST00000580646 ZBTB7AO95365 584 aa13.28□□□□□ -0.28
GGA3-209ENST00000580646 IL13P35225 146 aa13.28□□□□□ -0.28
GGA3-209ENST00000580646 NKX1-1Q15270 411 aaPredicted RBP13.28□□□□□ -0.28
GGA3-209ENST00000580646 ZNF827Q17R98 1081 aa13.28□□□□□ -0.28
GGA3-209ENST00000580646 MPRIPQ6WCQ1 1025 aa13.28□□□□□ -0.28
GGA3-209ENST00000580646 KDRP35968 1356 aa13.28□□□□□ -0.28
GGA3-209ENST00000580646 DIAPH1O60610 1272 aaKnown RBP13.27□□□□□ -0.29
GGA3-209ENST00000580646 KCNQ4P56696 695 aa13.27□□□□□ -0.29
GGA3-209ENST00000580646 CNGB1Q14028 1251 aaPredicted RBP13.27□□□□□ -0.29
GGA3-209ENST00000580646 AKT1S1Q96B36 256 aa13.27□□□□□ -0.29
GGA3-209ENST00000580646 PPP1R1BQ9UD71 204 aaPredicted RBP13.27□□□□□ -0.29
GGA3-209ENST00000580646 ATF5Q9Y2D1 282 aaPredicted RBP13.27□□□□□ -0.29
GGA3-209ENST00000580646 UTRNP46939 3433 aa13.27□□□□□ -0.29
GGA3-209ENST00000580646 PHKG2P15735 406 aa13.26□□□□□ -0.29
GGA3-209ENST00000580646 IFNL2Q8IZJ0 200 aa13.26□□□□□ -0.29
GGA3-209ENST00000580646 CCNL1Q9UK58 526 aaPredicted RBP13.26□□□□□ -0.29
GGA3-209ENST00000580646 DOT1LQ8TEK3 1739 aa13.25□□□□□ -0.29
GGA3-209ENST00000580646 ANP32CO43423 234 aa13.25□□□□□ -0.29
GGA3-209ENST00000580646 MTFR1LQ9H019 292 aa13.25□□□□□ -0.29
GGA3-209ENST00000580646 PTGER2P43116 358 aa13.24□□□□□ -0.29
GGA3-209ENST00000580646 PLEKHO1Q53GL0 409 aaPredicted RBP13.24□□□□□ -0.29
GGA3-209ENST00000580646 PIGBQ92521 554 aa13.24□□□□□ -0.29
GGA3-209ENST00000580646 SMARCC1Q92922 1105 aaPredicted RBP13.24□□□□□ -0.29
GGA3-209ENST00000580646 PAPPAQ13219 1627 aa13.24□□□□□ -0.29
GGA3-209ENST00000580646 VIRMAQ69YN4 1812 aaKnown RBP13.23□□□□□ -0.29
GGA3-209ENST00000580646 CASZ1Q86V15 1759 aa13.23□□□□□ -0.29
GGA3-209ENST00000580646 SENP3-EIF4A1A0A087X0R7 540 aa13.23□□□□□ -0.29
GGA3-209ENST00000580646 AEBP1Q8IUX7 1158 aa13.23□□□□□ -0.29
GGA3-209ENST00000580646 ZNF784Q8NCA9 323 aaPredicted RBP13.23□□□□□ -0.29
GGA3-209ENST00000580646 TFCP2L1Q9NZI6 479 aa13.23□□□□□ -0.29
GGA3-209ENST00000580646 NUDCQ9Y266 331 aa13.23□□□□□ -0.29
GGA3-209ENST00000580646 PALLDQ8WX93 1383 aa13.22□□□□□ -0.29
GGA3-209ENST00000580646 HMGB2P26583 209 aaKnown RBP13.22□□□□□ -0.29
GGA3-209ENST00000580646 AMOTQ4VCS5 1084 aa13.22□□□□□ -0.29
GGA3-209ENST00000580646 SULT6B1Q6IMI4 303 aa13.22□□□□□ -0.29
GGA3-209ENST00000580646 SLC16A10Q8TF71 515 aa13.22□□□□□ -0.29
GGA3-209ENST00000580646 TMOD3Q9NYL9 352 aa13.22□□□□□ -0.29
GGA3-209ENST00000580646 PNPLA7Q6ZV29 1317 aa13.21□□□□□ -0.29
GGA3-209ENST00000580646 HSP90AB1P08238 724 aaKnown RBP13.21□□□□□ -0.29
GGA3-209ENST00000580646 ZNF530Q6P9A1 599 aaPredicted RBP13.21□□□□□ -0.29
GGA3-209ENST00000580646 SGIP1Q9BQI5 828 aa13.21□□□□□ -0.29
GGA3-209ENST00000580646 ERVV-2B6SEH9 535 aa13.19□□□□□ -0.3
GGA3-209ENST00000580646 DCAF5Q96JK2 942 aa13.19□□□□□ -0.3
GGA3-209ENST00000580646 ASAP1Q9ULH1 1129 aa13.19□□□□□ -0.3
GGA3-209ENST00000580646 LY75O60449 1722 aa13.19□□□□□ -0.3
GGA3-209ENST00000580646 LOC102724428A0A0B4J2F2 783 aa13.18□□□□□ -0.3
GGA3-209ENST00000580646 FCHSD2O94868 740 aa13.18□□□□□ -0.3
GGA3-209ENST00000580646 SIK1P57059 783 aa13.18□□□□□ -0.3
GGA3-209ENST00000580646 C1orf141Q5JVX7 400 aa13.18□□□□□ -0.3
GGA3-209ENST00000580646 ARXQ96QS3 562 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms