RNA–Protein interactions for RNA: ENST00000580583.5

PPP4R1-217, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 5

Gene PPP4R1, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-217ENST00000580583 EYA1Q99502 592 aa8.08□□□□□ -1.12
PPP4R1-217ENST00000580583 TNNQ9UQP3 1299 aa8.08□□□□□ -1.12
PPP4R1-217ENST00000580583 TNS3Q68CZ2 1445 aa8.08□□□□□ -1.12
PPP4R1-217ENST00000580583 KIAA0232Q92628 1395 aa8.08□□□□□ -1.12
PPP4R1-217ENST00000580583 MAP3K5Q99683 1374 aa8.08□□□□□ -1.12
PPP4R1-217ENST00000580583 TRIM27P14373 513 aa8.07□□□□□ -1.12
PPP4R1-217ENST00000580583 HAP1P54257 671 aaPredicted RBP8.07□□□□□ -1.12
PPP4R1-217ENST00000580583 HSPA2P54652 639 aa8.07□□□□□ -1.12
PPP4R1-217ENST00000580583 BRPF1P55201 1214 aaPredicted RBP8.07□□□□□ -1.12
PPP4R1-217ENST00000580583 TWISTNBQ3B726 338 aaPredicted RBP8.07□□□□□ -1.12
PPP4R1-217ENST00000580583 IP6K1Q92551 441 aa8.07□□□□□ -1.12
PPP4R1-217ENST00000580583 FOXO3O43524 673 aa8.06□□□□□ -1.12
PPP4R1-217ENST00000580583 XPCQ01831 940 aaPredicted RBP8.06□□□□□ -1.12
PPP4R1-217ENST00000580583 DCTN1Q14203 1278 aa8.06□□□□□ -1.12
PPP4R1-217ENST00000580583 MTHFSDQ2M296 383 aaKnown RBP8.06□□□□□ -1.12
PPP4R1-217ENST00000580583 MCM10Q7L590 875 aa8.06□□□□□ -1.12
PPP4R1-217ENST00000580583 CADPS2Q86UW7 1296 aa8.06□□□□□ -1.12
PPP4R1-217ENST00000580583 RTF1Q92541 710 aaKnown RBP8.06□□□□□ -1.12
PPP4R1-217ENST00000580583 NOB1Q9ULX3 412 aaKnown RBP8.06□□□□□ -1.12
PPP4R1-217ENST00000580583 DDX19BQ9UMR2 479 aa8.06□□□□□ -1.12
PPP4R1-217ENST00000580583 NPHP3Q7Z494 1330 aa8.05□□□□□ -1.12
PPP4R1-217ENST00000580583 OVOS2A0A0G2JMS6 1433 aa8.05□□□□□ -1.12
PPP4R1-217ENST00000580583 CHL1O00533 1208 aa8.05□□□□□ -1.12
PPP4R1-217ENST00000580583 HTATSF1O43719 755 aaKnown RBP8.05□□□□□ -1.12
PPP4R1-217ENST00000580583 VAMP4O75379 141 aa8.05□□□□□ -1.12
PPP4R1-217ENST00000580583 KRT28Q7Z3Y7 464 aa8.05□□□□□ -1.12
PPP4R1-217ENST00000580583 ITPRIPQ8IWB1 547 aa8.05□□□□□ -1.12
PPP4R1-217ENST00000580583 MRPL50Q8N5N7 158 aaKnown RBP8.05□□□□□ -1.12
PPP4R1-217ENST00000580583 LTV1Q96GA3 475 aaPredicted RBP8.05□□□□□ -1.12
PPP4R1-217ENST00000580583 VIRMAQ69YN4 1812 aaKnown RBP8.05□□□□□ -1.12
PPP4R1-217ENST00000580583 ABCC4O15439 1325 aa8.04□□□□□ -1.12
PPP4R1-217ENST00000580583 KDM4FA0A1W2PPD8 638 aa8.04□□□□□ -1.12
PPP4R1-217ENST00000580583 ZBTB7CA1YPR0 619 aa8.04□□□□□ -1.12
PPP4R1-217ENST00000580583 GCP02774 474 aa8.04□□□□□ -1.12
PPP4R1-217ENST00000580583 ARHGEF25Q86VW2 580 aa8.04□□□□□ -1.12
PPP4R1-217ENST00000580583 TMEM57Q8N5G2 664 aa8.04□□□□□ -1.12
PPP4R1-217ENST00000580583 TSPYL6Q8N831 410 aa8.04□□□□□ -1.12
PPP4R1-217ENST00000580583 C8orf58Q8NAV2 365 aa8.04□□□□□ -1.12
PPP4R1-217ENST00000580583 ARHGAP45Q92619 1136 aa8.04□□□□□ -1.12
PPP4R1-217ENST00000580583 RGPD2P0DJD1 1756 aa8.04□□□□□ -1.12
PPP4R1-217ENST00000580583 KDM3BQ7LBC6 1761 aa8.04□□□□□ -1.12
PPP4R1-217ENST00000580583 RGS12O14924 1447 aa8.03□□□□□ -1.12
PPP4R1-217ENST00000580583 ABCA3Q99758 1704 aa8.03□□□□□ -1.12
PPP4R1-217ENST00000580583 PLEKHG2Q9H7P9 1386 aa8.03□□□□□ -1.12
PPP4R1-217ENST00000580583 GNAT3A8MTJ3 354 aa8.03□□□□□ -1.12
PPP4R1-217ENST00000580583 LMOD2Q6P5Q4 547 aa8.03□□□□□ -1.12
PPP4R1-217ENST00000580583 USHBP1Q8N6Y0 703 aa8.03□□□□□ -1.12
PPP4R1-217ENST00000580583 API5Q9BZZ5 524 aaKnown RBP8.03□□□□□ -1.12
PPP4R1-217ENST00000580583 CHMP4BQ9H444 224 aaKnown RBP8.03□□□□□ -1.12
PPP4R1-217ENST00000580583 COL18A1P39060 1754 aa8.02□□□□□ -1.13
PPP4R1-217ENST00000580583 N4BP2Q86UW6 1770 aaPredicted RBP8.02□□□□□ -1.13
PPP4R1-217ENST00000580583 ADAMTS7Q9UKP4 1686 aa8.02□□□□□ -1.13
PPP4R1-217ENST00000580583 IGHDP01880 384 aa8.02□□□□□ -1.13
PPP4R1-217ENST00000580583 SKAP1Q86WV1 359 aa8.02□□□□□ -1.13
PPP4R1-217ENST00000580583 ANKRD24Q8TF21 1146 aa8.02□□□□□ -1.13
PPP4R1-217ENST00000580583 RWDD1Q9H446 243 aaPredicted RBP8.02□□□□□ -1.13
PPP4R1-217ENST00000580583 TSPYL4Q9UJ04 414 aa8.02□□□□□ -1.13
PPP4R1-217ENST00000580583 PCDHB15Q9Y5E8 787 aa8.02□□□□□ -1.13
PPP4R1-217ENST00000580583 NHSL1Q5SYE7 1610 aa8.02□□□□□ -1.13
PPP4R1-217ENST00000580583 SOS1Q07889 1333 aaPredicted RBP8.02□□□□□ -1.13
PPP4R1-217ENST00000580583 CPDO75976 1380 aa8.01□□□□□ -1.13
PPP4R1-217ENST00000580583 CEMIPQ8WUJ3 1361 aa8.01□□□□□ -1.13
PPP4R1-217ENST00000580583 ELL2O00472 640 aaPredicted RBP8.01□□□□□ -1.13
PPP4R1-217ENST00000580583 PDE4AP27815 886 aa8.01□□□□□ -1.13
PPP4R1-217ENST00000580583 ANP32AP39687 249 aaKnown RBP8.01□□□□□ -1.13
PPP4R1-217ENST00000580583 RGS3P49796 1198 aa8.01□□□□□ -1.13
PPP4R1-217ENST00000580583 HDAC1Q13547 482 aaPredicted RBP8.01□□□□□ -1.13
PPP4R1-217ENST00000580583 NBPF6Q5VWK0 638 aa8.01□□□□□ -1.13
PPP4R1-217ENST00000580583 NBPF4Q96M43 638 aa8.01□□□□□ -1.13
PPP4R1-217ENST00000580583 BACH2Q9BYV9 841 aa8.01□□□□□ -1.13
PPP4R1-217ENST00000580583 BABAM1Q9NWV8 329 aa8.01□□□□□ -1.13
PPP4R1-217ENST00000580583 PTPRCP08575 1304 aa8.01□□□□□ -1.13
PPP4R1-217ENST00000580583 ERBB3P21860 1342 aa8.01□□□□□ -1.13
PPP4R1-217ENST00000580583 ZNF335Q9H4Z2 1342 aaPredicted RBP8.01□□□□□ -1.13
PPP4R1-217ENST00000580583 PKD1L3Q7Z443 1732 aa8□□□□□ -1.13
PPP4R1-217ENST00000580583 PARP4Q9UKK3 1724 aaKnown RBP8□□□□□ -1.13
PPP4R1-217ENST00000580583 PXDNLA1KZ92 1463 aa8□□□□□ -1.13
PPP4R1-217ENST00000580583 RGPD5Q99666 1765 aa8□□□□□ -1.13
PPP4R1-217ENST00000580583 KRT24Q2M2I5 525 aa8□□□□□ -1.13
PPP4R1-217ENST00000580583 LRRC59Q96AG4 307 aaKnown RBP8□□□□□ -1.13
PPP4R1-217ENST00000580583 ZBTB40Q9NUA8 1239 aa8□□□□□ -1.13
PPP4R1-217ENST00000580583 SPATA31A3Q5VYP0 1347 aa8□□□□□ -1.13
PPP4R1-217ENST00000580583 PLEKHG5O94827 1062 aa7.99□□□□□ -1.13
PPP4R1-217ENST00000580583 FAM161AQ3B820 660 aa7.99□□□□□ -1.13
PPP4R1-217ENST00000580583 AMOTQ4VCS5 1084 aa7.99□□□□□ -1.13
PPP4R1-217ENST00000580583 PLEKHO1Q53GL0 409 aaPredicted RBP7.99□□□□□ -1.13
PPP4R1-217ENST00000580583 ZNF530Q6P9A1 599 aaPredicted RBP7.99□□□□□ -1.13
PPP4R1-217ENST00000580583 BRINP3Q76B58 766 aa7.99□□□□□ -1.13
PPP4R1-217ENST00000580583 RNF216Q9NWF9 866 aaPredicted RBP7.99□□□□□ -1.13
PPP4R1-217ENST00000580583 SIPA1L3O60292 1781 aaPredicted RBP7.99□□□□□ -1.13
PPP4R1-217ENST00000580583 MRC1P22897 1456 aa7.99□□□□□ -1.13
PPP4R1-217ENST00000580583 MEGF6O75095 1541 aa7.98□□□□□ -1.13
PPP4R1-217ENST00000580583 AKAP4Q5JQC9 854 aa7.98□□□□□ -1.13
PPP4R1-217ENST00000580583 C1orf141Q5JVX7 400 aa7.98□□□□□ -1.13
PPP4R1-217ENST00000580583 IL17REQ8NFR9 667 aa7.98□□□□□ -1.13
PPP4R1-217ENST00000580583 DDX17Q92841 729 aaKnown RBP7.98□□□□□ -1.13
PPP4R1-217ENST00000580583 STK31Q9BXU1 1019 aa7.98□□□□□ -1.13
PPP4R1-217ENST00000580583 ATP10DQ9P241 1426 aa7.97□□□□□ -1.13
PPP4R1-217ENST00000580583 TAF7Q15545 349 aaPredicted RBP7.97□□□□□ -1.13
PPP4R1-217ENST00000580583 C8orf34Q49A92 452 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms