RNA–Protein interactions for RNA: ENST00000580556.5

CCDC84-209, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-209ENST00000580556 CDCA7Q9BWT1 371 aaPredicted RBP16.52■□□□□ 0.24
CCDC84-209ENST00000580556 NFAT5O94916 1531 aa16.51■□□□□ 0.23
CCDC84-209ENST00000580556 ARHGEF25Q86VW2 580 aa16.51■□□□□ 0.23
CCDC84-209ENST00000580556 KLHL34Q8N239 644 aa16.51■□□□□ 0.23
CCDC84-209ENST00000580556 CARD10Q9BWT7 1032 aa16.51■□□□□ 0.23
CCDC84-209ENST00000580556 GGNBP2Q9H3C7 697 aa16.51■□□□□ 0.23
CCDC84-209ENST00000580556 MAP3K5Q99683 1374 aa16.51■□□□□ 0.23
CCDC84-209ENST00000580556 GOLGB1Q14789 3259 aaKnown RBP16.5■□□□□ 0.23
CCDC84-209ENST00000580556 NHSQ6T4R5 1651 aa16.5■□□□□ 0.23
CCDC84-209ENST00000580556 KCNH5Q8NCM2 988 aa16.5■□□□□ 0.23
CCDC84-209ENST00000580556 CEP350Q5VT06 3117 aa16.49■□□□□ 0.23
CCDC84-209ENST00000580556 PELP1Q8IZL8 1130 aaKnown RBP16.49■□□□□ 0.23
CCDC84-209ENST00000580556 SHANK3Q9BYB0 1731 aa16.49■□□□□ 0.23
CCDC84-209ENST00000580556 LRRC4BQ9NT99 713 aa16.49■□□□□ 0.23
CCDC84-209ENST00000580556 TNS2Q63HR2 1409 aa16.48■□□□□ 0.23
CCDC84-209ENST00000580556 ABCC6O95255 1503 aa16.48■□□□□ 0.23
CCDC84-209ENST00000580556 CC2D1BQ5T0F9 858 aaKnown RBP16.47■□□□□ 0.23
CCDC84-209ENST00000580556 MORC1Q86VD1 984 aa16.47■□□□□ 0.23
CCDC84-209ENST00000580556 BTAF1O14981 1849 aa16.47■□□□□ 0.23
CCDC84-209ENST00000580556 RALBP1Q15311 655 aa16.46■□□□□ 0.23
CCDC84-209ENST00000580556 NLGN2Q8NFZ4 835 aa16.46■□□□□ 0.23
CCDC84-209ENST00000580556 KIF24Q5T7B8 1368 aa16.46■□□□□ 0.23
CCDC84-209ENST00000580556 SMG6Q86US8 1419 aaKnown RBP16.45■□□□□ 0.22
CCDC84-209ENST00000580556 KAT6BQ8WYB5 2073 aa16.44■□□□□ 0.22
CCDC84-209ENST00000580556 RTL1A6NKG5 1358 aa16.43■□□□□ 0.22
CCDC84-209ENST00000580556 AKT1S1Q96B36 256 aa16.43■□□□□ 0.22
CCDC84-209ENST00000580556 PRKRIP1Q9H875 184 aaPredicted RBP16.43■□□□□ 0.22
CCDC84-209ENST00000580556 KCNQ4P56696 695 aa16.42■□□□□ 0.22
CCDC84-209ENST00000580556 PNPLA7Q6ZV29 1317 aa16.42■□□□□ 0.22
CCDC84-209ENST00000580556 TUBGCP6Q96RT7 1819 aa16.41■□□□□ 0.22
CCDC84-209ENST00000580556 YBX3P16989 372 aaKnown RBP eCLIP16.41■□□□□ 0.22
CCDC84-209ENST00000580556 COL24A1Q17RW2 1714 aa16.41■□□□□ 0.22
CCDC84-209ENST00000580556 LTN1O94822 1766 aa16.41■□□□□ 0.22
CCDC84-209ENST00000580556 ANP32CO43423 234 aa16.4■□□□□ 0.22
CCDC84-209ENST00000580556 DIEXFQ68CQ4 756 aaKnown RBP16.4■□□□□ 0.22
CCDC84-209ENST00000580556 NLRP2Q9NX02 1062 aa16.4■□□□□ 0.22
CCDC84-209ENST00000580556 MAP3K19Q56UN5 1328 aa16.4■□□□□ 0.22
CCDC84-209ENST00000580556 POLD1P28340 1107 aa16.39■□□□□ 0.21
CCDC84-209ENST00000580556 POLKQ9UBT6 870 aa16.39■□□□□ 0.21
CCDC84-209ENST00000580556 MYBBP1AQ9BQG0 1328 aaKnown RBP16.39■□□□□ 0.21
CCDC84-209ENST00000580556 FLT4P35916 1363 aa16.38■□□□□ 0.21
CCDC84-209ENST00000580556 IL2RBP14784 551 aa16.38■□□□□ 0.21
CCDC84-209ENST00000580556 SLC16A10Q8TF71 515 aa16.38■□□□□ 0.21
CCDC84-209ENST00000580556 QSER1Q2KHR3 1735 aa16.38■□□□□ 0.21
CCDC84-209ENST00000580556 PPP2R1AP30153 589 aa16.37■□□□□ 0.21
CCDC84-209ENST00000580556 TNNT2P45379 298 aaPredicted RBP16.37■□□□□ 0.21
CCDC84-209ENST00000580556 RRS1Q15050 365 aaKnown RBP16.37■□□□□ 0.21
CCDC84-209ENST00000580556 MAP2P11137 1827 aaKnown RBP16.37■□□□□ 0.21
CCDC84-209ENST00000580556 ERBB3P21860 1342 aa16.37■□□□□ 0.21
CCDC84-209ENST00000580556 INSRP06213 1382 aa16.37■□□□□ 0.21
CCDC84-209ENST00000580556 CNGB1Q14028 1251 aaPredicted RBP16.36■□□□□ 0.21
CCDC84-209ENST00000580556 IP6K1Q92551 441 aa16.36■□□□□ 0.21
CCDC84-209ENST00000580556 EMILIN1Q9Y6C2 1016 aa16.36■□□□□ 0.21
CCDC84-209ENST00000580556 ATP10DQ9P241 1426 aa16.36■□□□□ 0.21
CCDC84-209ENST00000580556 FBLN1P23142 703 aa16.35■□□□□ 0.21
CCDC84-209ENST00000580556 TFCP2L1Q9NZI6 479 aa16.35■□□□□ 0.21
CCDC84-209ENST00000580556 HOXC9P31274 260 aa16.34■□□□□ 0.21
CCDC84-209ENST00000580556 AMPHP49418 695 aa16.34■□□□□ 0.21
CCDC84-209ENST00000580556 MTHFSP49914 203 aa16.34■□□□□ 0.21
CCDC84-209ENST00000580556 SLC27A3Q5K4L6 730 aa16.33■□□□□ 0.2
CCDC84-209ENST00000580556 DDX54Q8TDD1 881 aaKnown RBP16.33■□□□□ 0.2
CCDC84-209ENST00000580556 ANKRD24Q8TF21 1146 aa16.33■□□□□ 0.2
CCDC84-209ENST00000580556 COL3A1P02461 1466 aaPredicted RBP16.33■□□□□ 0.2
CCDC84-209ENST00000580556 GRIN3BO60391 1043 aa16.32■□□□□ 0.2
CCDC84-209ENST00000580556 ZNF526Q8TF50 670 aaPredicted RBP16.32■□□□□ 0.2
CCDC84-209ENST00000580556 FAM208AQ9UK61 1670 aaKnown RBP16.32■□□□□ 0.2
CCDC84-209ENST00000580556 MSL1Q68DK7 614 aa16.31■□□□□ 0.2
CCDC84-209ENST00000580556 SYTL4Q96C24 671 aaPredicted RBP16.31■□□□□ 0.2
CCDC84-209ENST00000580556 PRIM1P49642 420 aaKnown RBP16.3■□□□□ 0.2
CCDC84-209ENST00000580556 COL23A1Q86Y22 540 aaPredicted RBP16.3■□□□□ 0.2
CCDC84-209ENST00000580556 CFAP53Q96M91 514 aa16.3■□□□□ 0.2
CCDC84-209ENST00000580556 LY75O60449 1722 aa16.29■□□□□ 0.2
CCDC84-209ENST00000580556 PPM1GO15355 546 aaPredicted RBP16.29■□□□□ 0.2
CCDC84-209ENST00000580556 MSH5O43196 834 aa16.29■□□□□ 0.2
CCDC84-209ENST00000580556 HSPA6P17066 643 aa16.29■□□□□ 0.2
CCDC84-209ENST00000580556 HSP90AB2PQ58FF8 381 aa16.29■□□□□ 0.2
CCDC84-209ENST00000580556 GPBP1L1Q9HC44 474 aaPredicted RBP16.29■□□□□ 0.2
CCDC84-209ENST00000580556 DOT1LQ8TEK3 1739 aa16.28■□□□□ 0.2
CCDC84-209ENST00000580556 LTV1Q96GA3 475 aaPredicted RBP16.27■□□□□ 0.2
CCDC84-209ENST00000580556 WWC3Q9ULE0 1092 aa16.26■□□□□ 0.19
CCDC84-209ENST00000580556 NCAPD2Q15021 1401 aa16.26■□□□□ 0.19
CCDC84-209ENST00000580556 ADCY9O60503 1353 aa16.26■□□□□ 0.19
CCDC84-209ENST00000580556 CCER2I3L3R5 266 aa16.25■□□□□ 0.19
CCDC84-209ENST00000580556 DIAPH1O60610 1272 aaKnown RBP16.25■□□□□ 0.19
CCDC84-209ENST00000580556 IL13P35225 146 aa16.25■□□□□ 0.19
CCDC84-209ENST00000580556 EIF4A2Q14240 407 aaKnown RBP16.25■□□□□ 0.19
CCDC84-209ENST00000580556 CCNL1Q9UK58 526 aaPredicted RBP16.25■□□□□ 0.19
CCDC84-209ENST00000580556 IGSF1Q8N6C5 1336 aa16.22■□□□□ 0.19
CCDC84-209ENST00000580556 NUDCQ9Y266 331 aa16.22■□□□□ 0.19
CCDC84-209ENST00000580556 RGPD2P0DJD1 1756 aa16.22■□□□□ 0.19
CCDC84-209ENST00000580556 PLEKHG2Q9H7P9 1386 aa16.22■□□□□ 0.19
CCDC84-209ENST00000580556 MIER1Q8N108 512 aa16.21■□□□□ 0.19
CCDC84-209ENST00000580556 KDRP35968 1356 aa16.21■□□□□ 0.19
CCDC84-209ENST00000580556 MRS2Q9HD23 443 aa16.2■□□□□ 0.18
CCDC84-209ENST00000580556 CD2APQ9Y5K6 639 aa16.2■□□□□ 0.18
CCDC84-209ENST00000580556 MEGF6O75095 1541 aa16.19■□□□□ 0.18
CCDC84-209ENST00000580556 KIF3CO14782 793 aa16.19■□□□□ 0.18
CCDC84-209ENST00000580556 NBPF6Q5VWK0 638 aa16.19■□□□□ 0.18
CCDC84-209ENST00000580556 SMIM5Q71RC9 77 aa16.19■□□□□ 0.18
CCDC84-209ENST00000580556 AMIGO3Q86WK7 504 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms