RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-209ENST00000580158 SPATA31A1Q5TZJ5 1347 aa9.24□□□□□ -0.93
KPNB1-209ENST00000580158 SHANK3Q9BYB0 1731 aa9.23□□□□□ -0.93
KPNB1-209ENST00000580158 LSM11P83369 360 aaKnown RBP eCLIP9.23□□□□□ -0.932e-11■□□□□ 8.3
KPNB1-209ENST00000580158 LHX6Q9UPM6 363 aa9.23□□□□□ -0.93
KPNB1-209ENST00000580158 NUP155O75694 1391 aa9.23□□□□□ -0.93
KPNB1-209ENST00000580158 IFT172Q9UG01 1749 aa9.22□□□□□ -0.93
KPNB1-209ENST00000580158 SBF2Q86WG5 1849 aa9.22□□□□□ -0.93
KPNB1-209ENST00000580158 PLSCR1O15162 318 aa9.22□□□□□ -0.93
KPNB1-209ENST00000580158 PBX2P40425 430 aa9.22□□□□□ -0.93
KPNB1-209ENST00000580158 MTFR1LQ9H019 292 aa9.22□□□□□ -0.93
KPNB1-209ENST00000580158 WAPLQ7Z5K2 1190 aa9.21□□□□□ -0.94
KPNB1-209ENST00000580158 ARXQ96QS3 562 aa9.21□□□□□ -0.94
KPNB1-209ENST00000580158 PDGFDQ9GZP0 370 aaPredicted RBP9.21□□□□□ -0.94
KPNB1-209ENST00000580158 PRDM11Q9NQV5 511 aa9.21□□□□□ -0.94
KPNB1-209ENST00000580158 STRN4Q9NRL3 753 aa9.21□□□□□ -0.94
KPNB1-209ENST00000580158 USP35Q9P2H5 1018 aa9.21□□□□□ -0.94
KPNB1-209ENST00000580158 EVA1CP58658 441 aa9.2□□□□□ -0.94
KPNB1-209ENST00000580158 BARGINQ6ZT62 677 aa9.2□□□□□ -0.94
KPNB1-209ENST00000580158 ANO8Q9HCE9 1232 aaPredicted RBP9.2□□□□□ -0.94
KPNB1-209ENST00000580158 STK32BQ9NY57 414 aa9.2□□□□□ -0.94
KPNB1-209ENST00000580158 STK26Q9P289 416 aa9.2□□□□□ -0.94
KPNB1-209ENST00000580158 VPS8Q8N3P4 1428 aa9.2□□□□□ -0.94
KPNB1-209ENST00000580158 PRELPP51888 382 aa9.19□□□□□ -0.94
KPNB1-209ENST00000580158 FAM50AQ14320 339 aaKnown RBP9.19□□□□□ -0.94
KPNB1-209ENST00000580158 GPBP1L1Q9HC44 474 aaPredicted RBP9.19□□□□□ -0.94
KPNB1-209ENST00000580158 NRXN1Q9ULB1 1477 aa9.19□□□□□ -0.94
KPNB1-209ENST00000580158 CLTCL1P53675 1640 aa9.19□□□□□ -0.94
KPNB1-209ENST00000580158 PPLO60437 1756 aa9.19□□□□□ -0.94
KPNB1-209ENST00000580158 RPGRIP1LQ68CZ1 1315 aa9.18□□□□□ -0.94
KPNB1-209ENST00000580158 KNDC1Q76NI1 1749 aa9.18□□□□□ -0.94
KPNB1-209ENST00000580158 HS6ST3Q8IZP7 471 aa9.18□□□□□ -0.94
KPNB1-209ENST00000580158 MAP3K5Q99683 1374 aa9.18□□□□□ -0.94
KPNB1-209ENST00000580158 ALS2Q96Q42 1657 aa9.17□□□□□ -0.94
KPNB1-209ENST00000580158 GRIN3BO60391 1043 aa9.17□□□□□ -0.94
KPNB1-209ENST00000580158 SLC15A2Q16348 729 aa9.17□□□□□ -0.94
KPNB1-209ENST00000580158 TNS4Q8IZW8 715 aa9.17□□□□□ -0.94
KPNB1-209ENST00000580158 AXIN2Q9Y2T1 843 aa9.17□□□□□ -0.94
KPNB1-209ENST00000580158 TRPM3Q9HCF6 1732 aaPredicted RBP9.17□□□□□ -0.94
KPNB1-209ENST00000580158 TECPR2O15040 1411 aa9.16□□□□□ -0.94
KPNB1-209ENST00000580158 GPRASP1Q5JY77 1395 aa9.16□□□□□ -0.94
KPNB1-209ENST00000580158 TCP11L2Q8N4U5 519 aa9.16□□□□□ -0.94
KPNB1-209ENST00000580158 PMFBP1Q8TBY8 1022 aa9.16□□□□□ -0.94
KPNB1-209ENST00000580158 PARP4Q9UKK3 1724 aaKnown RBP9.16□□□□□ -0.94
KPNB1-209ENST00000580158 CRYBG1Q9Y4K1 1723 aa9.16□□□□□ -0.94
KPNB1-209ENST00000580158 TBC1D12O60347 775 aa9.15□□□□□ -0.94
KPNB1-209ENST00000580158 APLP1P51693 650 aa9.15□□□□□ -0.94
KPNB1-209ENST00000580158 FOXK1P85037 733 aa9.15□□□□□ -0.94
KPNB1-209ENST00000580158 PLPP6Q8IY26 295 aa9.15□□□□□ -0.94
KPNB1-209ENST00000580158 PTCD2Q8WV60 388 aaKnown RBP9.15□□□□□ -0.94
KPNB1-209ENST00000580158 GPHNQ9NQX3 736 aaPredicted RBP9.15□□□□□ -0.94
KPNB1-209ENST00000580158 THRAP3Q9Y2W1 955 aaKnown RBP9.15□□□□□ -0.94
KPNB1-209ENST00000580158 OVOS2A0A0G2JMS6 1433 aa9.14□□□□□ -0.95
KPNB1-209ENST00000580158 OVOS2A0A0J9YW53 1432 aa9.14□□□□□ -0.95
KPNB1-209ENST00000580158 OVOS2Q6IE36 1432 aa9.14□□□□□ -0.95
KPNB1-209ENST00000580158 ATP10DQ9P241 1426 aa9.14□□□□□ -0.95
KPNB1-209ENST00000580158 ARHGAP33O14559 1287 aa9.14□□□□□ -0.95
KPNB1-209ENST00000580158 CHRNA2Q15822 529 aa9.14□□□□□ -0.95
KPNB1-209ENST00000580158 COL13A1Q5TAT6 717 aaPredicted RBP9.14□□□□□ -0.95
KPNB1-209ENST00000580158 POTEEQ6S8J3 1075 aa9.14□□□□□ -0.95
KPNB1-209ENST00000580158 ABCC11Q96J66 1382 aa9.13□□□□□ -0.95
KPNB1-209ENST00000580158 PLEKHH1Q9ULM0 1364 aa9.13□□□□□ -0.95
KPNB1-209ENST00000580158 KAT6BQ8WYB5 2073 aa9.13□□□□□ -0.95
KPNB1-209ENST00000580158 AKAP12Q02952 1782 aa9.13□□□□□ -0.95
KPNB1-209ENST00000580158 KIAA0232Q92628 1395 aa9.12□□□□□ -0.95
KPNB1-209ENST00000580158 POLD1P28340 1107 aa9.12□□□□□ -0.95
KPNB1-209ENST00000580158 TXNRD1Q16881 649 aa9.12□□□□□ -0.95
KPNB1-209ENST00000580158 SSH2Q76I76 1423 aa9.12□□□□□ -0.95
KPNB1-209ENST00000580158 DHX57Q6P158 1386 aaKnown RBP9.12□□□□□ -0.95
KPNB1-209ENST00000580158 PEAK1Q9H792 1746 aa9.11□□□□□ -0.95
KPNB1-209ENST00000580158 ZC3H6P61129 1189 aaKnown RBP9.11□□□□□ -0.95
KPNB1-209ENST00000580158 ZNF526Q8TF50 670 aaPredicted RBP9.11□□□□□ -0.95
KPNB1-209ENST00000580158 RYDENQ9NUL5 291 aaKnown RBP9.11□□□□□ -0.95
KPNB1-209ENST00000580158 ROCK1Q13464 1354 aa9.11□□□□□ -0.95
KPNB1-209ENST00000580158 TOPAZ1Q8N9V7 1692 aa9.1□□□□□ -0.95
KPNB1-209ENST00000580158 PHRF1Q9P1Y6 1649 aaKnown RBP9.1□□□□□ -0.95
KPNB1-209ENST00000580158 TMEM132EQ6IEE7 984 aa9.1□□□□□ -0.95
KPNB1-209ENST00000580158 LARP1Q6PKG0 1096 aaKnown RBP9.1□□□□□ -0.95
KPNB1-209ENST00000580158 SIRT1Q96EB6 747 aa9.1□□□□□ -0.95
KPNB1-209ENST00000580158 ANKARQ7Z5J8 1434 aa9.09□□□□□ -0.95
KPNB1-209ENST00000580158 DSG2Q14126 1118 aa9.09□□□□□ -0.95
KPNB1-209ENST00000580158 DDB1Q16531 1140 aa9.09□□□□□ -0.95
KPNB1-209ENST00000580158 ADGRD1Q6QNK2 874 aa9.09□□□□□ -0.95
KPNB1-209ENST00000580158 DNAJC5GQ8N7S2 189 aa9.09□□□□□ -0.95
KPNB1-209ENST00000580158 NGDNQ8NEJ9 315 aaKnown RBP9.09□□□□□ -0.95
KPNB1-209ENST00000580158 ACIN1Q9UKV3 1341 aaKnown RBP9.08□□□□□ -0.96
KPNB1-209ENST00000580158 PPP4R3BQ5MIZ7 849 aa9.08□□□□□ -0.96
KPNB1-209ENST00000580158 SLC16A10Q8TF71 515 aa9.08□□□□□ -0.96
KPNB1-209ENST00000580158 AATKQ6ZMQ8 1374 aa9.08□□□□□ -0.96
KPNB1-209ENST00000580158 WDR90Q96KV7 1748 aa9.08□□□□□ -0.96
KPNB1-209ENST00000580158 ATP7BP35670 1465 aa9.08□□□□□ -0.96
KPNB1-209ENST00000580158 YTHDC2Q9H6S0 1430 aaKnown RBP9.07□□□□□ -0.96
KPNB1-209ENST00000580158 HCSTQ9UBK5 93 aa9.07□□□□□ -0.96
KPNB1-209ENST00000580158 ADGRF5Q8IZF2 1346 aa9.06□□□□□ -0.96
KPNB1-209ENST00000580158 LRRC37A3O60309 1634 aa9.06□□□□□ -0.96
KPNB1-209ENST00000580158 TK2O00142 265 aa9.06□□□□□ -0.96
KPNB1-209ENST00000580158 YBX3P16989 372 aaKnown RBP eCLIP9.06□□□□□ -0.965e-19■□□□□ 8
KPNB1-209ENST00000580158 SAFB2Q14151 953 aaKnown RBP eCLIP9.06□□□□□ -0.96
KPNB1-209ENST00000580158 PTF1AQ7RTS3 328 aa9.06□□□□□ -0.96
KPNB1-209ENST00000580158 NLGN2Q8NFZ4 835 aa9.06□□□□□ -0.96
KPNB1-209ENST00000580158 STAC3Q96MF2 364 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms