RNA–Protein interactions for RNA: ENST00000579618.1

SNRPD1-203, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

TSL 5 BASIC

Gene SNRPD1, Length 320 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-203ENST00000579618 KAT6BQ8WYB5 2073 aa14.32□□□□□ -0.12
SNRPD1-203ENST00000579618 MSL1Q68DK7 614 aa14.32□□□□□ -0.12
SNRPD1-203ENST00000579618 TTC21AQ8NDW8 1320 aa14.32□□□□□ -0.12
SNRPD1-203ENST00000579618 NSD2O96028 1365 aa14.32□□□□□ -0.12
SNRPD1-203ENST00000579618 C5P01031 1676 aa14.3□□□□□ -0.12
SNRPD1-203ENST00000579618 FAM208AQ9UK61 1670 aaKnown RBP14.3□□□□□ -0.12
SNRPD1-203ENST00000579618 MSH5O43196 834 aa14.29□□□□□ -0.12
SNRPD1-203ENST00000579618 HSPA5P11021 654 aaKnown RBP14.29□□□□□ -0.12
SNRPD1-203ENST00000579618 COL23A1Q86Y22 540 aaPredicted RBP14.29□□□□□ -0.12
SNRPD1-203ENST00000579618 ANKRD24Q8TF21 1146 aa14.29□□□□□ -0.12
SNRPD1-203ENST00000579618 SBNO2Q9Y2G9 1366 aa14.29□□□□□ -0.12
SNRPD1-203ENST00000579618 KIF3CO14782 793 aa14.28□□□□□ -0.12
SNRPD1-203ENST00000579618 EVC2Q86UK5 1308 aa14.28□□□□□ -0.12
SNRPD1-203ENST00000579618 KTN1Q86UP2 1357 aaKnown RBP14.28□□□□□ -0.12
SNRPD1-203ENST00000579618 ANKRD36BQ8N2N9 1353 aa14.28□□□□□ -0.12
SNRPD1-203ENST00000579618 DDX54Q8TDD1 881 aaKnown RBP14.28□□□□□ -0.12
SNRPD1-203ENST00000579618 SYTL4Q96C24 671 aaPredicted RBP14.28□□□□□ -0.12
SNRPD1-203ENST00000579618 ST20-MTHFSA0A0A6YYL1 179 aa14.27□□□□□ -0.13
SNRPD1-203ENST00000579618 ZNF692Q9BU19 519 aaPredicted RBP14.27□□□□□ -0.13
SNRPD1-203ENST00000579618 WWC3Q9ULE0 1092 aa14.27□□□□□ -0.13
SNRPD1-203ENST00000579618 WDR90Q96KV7 1748 aa14.27□□□□□ -0.13
SNRPD1-203ENST00000579618 USP31Q70CQ4 1352 aa14.26□□□□□ -0.13
SNRPD1-203ENST00000579618 PRIM1P49642 420 aaKnown RBP14.26□□□□□ -0.13
SNRPD1-203ENST00000579618 CCNL1Q9UK58 526 aaPredicted RBP14.26□□□□□ -0.13
SNRPD1-203ENST00000579618 TOGARAM1Q9Y4F4 1720 aa14.26□□□□□ -0.13
SNRPD1-203ENST00000579618 CICQ96RK0 1608 aaPredicted RBP14.26□□□□□ -0.13
SNRPD1-203ENST00000579618 TAF1LQ8IZX4 1826 aa14.25□□□□□ -0.13
SNRPD1-203ENST00000579618 RGPD2P0DJD1 1756 aa14.25□□□□□ -0.13
SNRPD1-203ENST00000579618 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.25□□□□□ -0.13
SNRPD1-203ENST00000579618 ZNF316A6NFI3 1004 aaPredicted RBP14.24□□□□□ -0.13
SNRPD1-203ENST00000579618 NME9Q86XW9 330 aa14.24□□□□□ -0.13
SNRPD1-203ENST00000579618 CD2APQ9Y5K6 639 aa14.24□□□□□ -0.13
SNRPD1-203ENST00000579618 CD163L1Q9NR16 1453 aa14.24□□□□□ -0.13
SNRPD1-203ENST00000579618 APLP1P51693 650 aa14.23□□□□□ -0.13
SNRPD1-203ENST00000579618 CDCA8Q53HL2 280 aa14.23□□□□□ -0.13
SNRPD1-203ENST00000579618 DNAJC5GQ8N7S2 189 aa14.23□□□□□ -0.13
SNRPD1-203ENST00000579618 IGSF1Q8N6C5 1336 aa14.22□□□□□ -0.13
SNRPD1-203ENST00000579618 MEGF6O75095 1541 aa14.22□□□□□ -0.13
SNRPD1-203ENST00000579618 TMF1P82094 1093 aa14.22□□□□□ -0.13
SNRPD1-203ENST00000579618 TESK2Q96S53 571 aa14.22□□□□□ -0.13
SNRPD1-203ENST00000579618 C4BP0C0L5 1744 aa14.21□□□□□ -0.13
SNRPD1-203ENST00000579618 CAPN15O75808 1086 aa14.21□□□□□ -0.13
SNRPD1-203ENST00000579618 COL13A1Q5TAT6 717 aaPredicted RBP14.2□□□□□ -0.14
SNRPD1-203ENST00000579618 LTV1Q96GA3 475 aaPredicted RBP14.2□□□□□ -0.14
SNRPD1-203ENST00000579618 PUS7Q96PZ0 661 aaKnown RBP14.2□□□□□ -0.14
SNRPD1-203ENST00000579618 KIAA1551Q9HCM1 1747 aa14.2□□□□□ -0.14
SNRPD1-203ENST00000579618 UBR3Q6ZT12 1888 aa14.2□□□□□ -0.14
SNRPD1-203ENST00000579618 AMIGO3Q86WK7 504 aa14.18□□□□□ -0.14
SNRPD1-203ENST00000579618 HTRA3P83110 453 aa14.16□□□□□ -0.14
SNRPD1-203ENST00000579618 SMIM5Q71RC9 77 aa14.16□□□□□ -0.14
SNRPD1-203ENST00000579618 IP6K1Q92551 441 aa14.16□□□□□ -0.14
SNRPD1-203ENST00000579618 N4BP2Q86UW6 1770 aaPredicted RBP14.16□□□□□ -0.14
SNRPD1-203ENST00000579618 EDC4Q6P2E9 1401 aaKnown RBP14.15□□□□□ -0.14
SNRPD1-203ENST00000579618 TOMM70O94826 608 aa14.15□□□□□ -0.14
SNRPD1-203ENST00000579618 ZCRB1Q8TBF4 217 aaKnown RBP14.15□□□□□ -0.14
SNRPD1-203ENST00000579618 PALLDQ8WX93 1383 aa14.14□□□□□ -0.15
SNRPD1-203ENST00000579618 KIF13BQ9NQT8 1826 aa14.14□□□□□ -0.15
SNRPD1-203ENST00000579618 ITGB4P16144 1822 aa14.13□□□□□ -0.15
SNRPD1-203ENST00000579618 PXDNLA1KZ92 1463 aa14.13□□□□□ -0.15
SNRPD1-203ENST00000579618 PHF14O94880 888 aa14.13□□□□□ -0.15
SNRPD1-203ENST00000579618 FLAD1Q8NFF5 587 aa14.13□□□□□ -0.15
SNRPD1-203ENST00000579618 NMRK2Q9NPI5 230 aa14.13□□□□□ -0.15
SNRPD1-203ENST00000579618 KIF7Q2M1P5 1343 aa14.13□□□□□ -0.15
SNRPD1-203ENST00000579618 WASHC2AQ641Q2 1341 aa14.13□□□□□ -0.15
SNRPD1-203ENST00000579618 PKD1L3Q7Z443 1732 aa14.12□□□□□ -0.15
SNRPD1-203ENST00000579618 A0A1W2PP64 1363 aa14.12□□□□□ -0.15
SNRPD1-203ENST00000579618 KLRG1Q96E93 195 aa14.12□□□□□ -0.15
SNRPD1-203ENST00000579618 HOXC9P31274 260 aa14.11□□□□□ -0.15
SNRPD1-203ENST00000579618 USHBP1Q8N6Y0 703 aa14.11□□□□□ -0.15
SNRPD1-203ENST00000579618 JMYQ8N9B5 988 aa14.11□□□□□ -0.15
SNRPD1-203ENST00000579618 AK7Q96M32 723 aa14.11□□□□□ -0.15
SNRPD1-203ENST00000579618 MAP2P11137 1827 aaKnown RBP14.11□□□□□ -0.15
SNRPD1-203ENST00000579618 FBLN1P23142 703 aa14.1□□□□□ -0.15
SNRPD1-203ENST00000579618 PRELPP51888 382 aa14.1□□□□□ -0.15
SNRPD1-203ENST00000579618 HDGFL2Q7Z4V5 671 aaPredicted RBP14.1□□□□□ -0.15
SNRPD1-203ENST00000579618 TNS4Q8IZW8 715 aa14.1□□□□□ -0.15
SNRPD1-203ENST00000579618 TMC1Q8TDI8 760 aa14.1□□□□□ -0.15
SNRPD1-203ENST00000579618 MAP3K19Q56UN5 1328 aa14.1□□□□□ -0.15
SNRPD1-203ENST00000579618 BRCA1P38398 1863 aaKnown RBP14.1□□□□□ -0.15
SNRPD1-203ENST00000579618 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.09□□□□□ -0.15
SNRPD1-203ENST00000579618 SLC12A5Q9H2X9 1139 aa14.09□□□□□ -0.15
SNRPD1-203ENST00000579618 NSD3Q9BZ95 1437 aa14.07□□□□□ -0.16
SNRPD1-203ENST00000579618 KCPQ6ZWJ8 1503 aa14.07□□□□□ -0.16
SNRPD1-203ENST00000579618 NBPF6Q5VWK0 638 aa14.07□□□□□ -0.16
SNRPD1-203ENST00000579618 MPRIPQ6WCQ1 1025 aa14.07□□□□□ -0.16
SNRPD1-203ENST00000579618 RBM46Q8TBY0 533 aaKnown RBP14.07□□□□□ -0.16
SNRPD1-203ENST00000579618 NBPF4Q96M43 638 aa14.07□□□□□ -0.16
SNRPD1-203ENST00000579618 BCS1LQ9Y276 419 aa14.07□□□□□ -0.16
SNRPD1-203ENST00000579618 AMPHP49418 695 aa14.06□□□□□ -0.16
SNRPD1-203ENST00000579618 TNRC6CQ9HCJ0 1690 aaKnown RBP14.06□□□□□ -0.16
SNRPD1-203ENST00000579618 PCNTO95613 3336 aa14.06□□□□□ -0.16
SNRPD1-203ENST00000579618 C10orf71Q711Q0 1435 aa14.06□□□□□ -0.16
SNRPD1-203ENST00000579618 SSFA2P28290 1259 aa14.05□□□□□ -0.16
SNRPD1-203ENST00000579618 LINC00116Q8NCU8 138 aa14.05□□□□□ -0.16
SNRPD1-203ENST00000579618 POLR3GLQ9BT43 218 aa14.05□□□□□ -0.16
SNRPD1-203ENST00000579618 ARFGEF1Q9Y6D6 1849 aa14.05□□□□□ -0.16
SNRPD1-203ENST00000579618 PCDH11XQ9BZA7 1347 aa14.05□□□□□ -0.16
SNRPD1-203ENST00000579618 PCDH11YQ9BZA8 1340 aa14.05□□□□□ -0.16
SNRPD1-203ENST00000579618 RTL1A6NKG5 1358 aa14.05□□□□□ -0.16
SNRPD1-203ENST00000579618 RAPGEF4Q8WZA2 1011 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms