RNA–Protein interactions for RNA: ENST00000579180.2

MSI2-206, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene MSI2, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-206ENST00000579180 PLEKHG2Q9H7P9 1386 aa20.46■□□□□ 0.87
MSI2-206ENST00000579180 CRB1P82279 1406 aa20.46■□□□□ 0.87
MSI2-206ENST00000579180 GNAT3A8MTJ3 354 aa20.45■□□□□ 0.87
MSI2-206ENST00000579180 GNAI1P63096 354 aa20.45■□□□□ 0.87
MSI2-206ENST00000579180 FKBP8Q14318 412 aa20.45■□□□□ 0.87
MSI2-206ENST00000579180 AMOTQ4VCS5 1084 aa20.45■□□□□ 0.87
MSI2-206ENST00000579180 PLEKHO1Q53GL0 409 aaPredicted RBP20.45■□□□□ 0.87
MSI2-206ENST00000579180 CFAP44Q96MT7 982 aa20.45■□□□□ 0.86
MSI2-206ENST00000579180 PLCH1Q4KWH8 1693 aa20.44■□□□□ 0.86
MSI2-206ENST00000579180 PKD1L3Q7Z443 1732 aa20.44■□□□□ 0.86
MSI2-206ENST00000579180 MEGF6O75095 1541 aa20.44■□□□□ 0.86
MSI2-206ENST00000579180 RTF1Q92541 710 aaKnown RBP20.44■□□□□ 0.86
MSI2-206ENST00000579180 RRP1P56182 461 aaKnown RBP20.43■□□□□ 0.86
MSI2-206ENST00000579180 PARP4Q9UKK3 1724 aaKnown RBP20.43■□□□□ 0.86
MSI2-206ENST00000579180 EXOSC9Q06265 439 aaKnown RBP20.42■□□□□ 0.86
MSI2-206ENST00000579180 RAPGEF4Q8WZA2 1011 aa20.42■□□□□ 0.86
MSI2-206ENST00000579180 LAS1LQ9Y4W2 734 aaKnown RBP20.42■□□□□ 0.86
MSI2-206ENST00000579180 TOM1L2Q6ZVM7 507 aa20.42■□□□□ 0.86
MSI2-206ENST00000579180 MBIPQ9NS73 344 aa20.42■□□□□ 0.86
MSI2-206ENST00000579180 BTG4Q9NY30 223 aa20.42■□□□□ 0.86
MSI2-206ENST00000579180 CT47B1P0C2W7 299 aaPredicted RBP20.41■□□□□ 0.86
MSI2-206ENST00000579180 TATP17735 454 aaPredicted RBP20.41■□□□□ 0.86
MSI2-206ENST00000579180 IRX6P78412 446 aaPredicted RBP20.41■□□□□ 0.86
MSI2-206ENST00000579180 IL17REQ8NFR9 667 aa20.41■□□□□ 0.86
MSI2-206ENST00000579180 CARD10Q9BWT7 1032 aa20.41■□□□□ 0.86
MSI2-206ENST00000579180 ADAMTS7Q9UKP4 1686 aa20.41■□□□□ 0.86
MSI2-206ENST00000579180 NRAPQ86VF7 1730 aa20.4■□□□□ 0.86
MSI2-206ENST00000579180 CHL1O00533 1208 aa20.4■□□□□ 0.86
MSI2-206ENST00000579180 EVA1CP58658 441 aa20.4■□□□□ 0.86
MSI2-206ENST00000579180 AKAP4Q5JQC9 854 aa20.4■□□□□ 0.86
MSI2-206ENST00000579180 ZNF530Q6P9A1 599 aaPredicted RBP20.4■□□□□ 0.86
MSI2-206ENST00000579180 LARP1Q6PKG0 1096 aaKnown RBP20.4■□□□□ 0.86
MSI2-206ENST00000579180 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.4■□□□□ 0.865e-9■■■□□ 16.4
MSI2-206ENST00000579180 JCADQ9P266 1359 aa20.39■□□□□ 0.86
MSI2-206ENST00000579180 STRN4Q9NRL3 753 aa20.39■□□□□ 0.86
MSI2-206ENST00000579180 CEMIPQ8WUJ3 1361 aa20.39■□□□□ 0.85
MSI2-206ENST00000579180 OVOS2A0A0G2JMS6 1433 aa20.38■□□□□ 0.85
MSI2-206ENST00000579180 NWD2Q9ULI1 1742 aa20.38■□□□□ 0.85
MSI2-206ENST00000579180 RARSP54136 660 aaKnown RBP20.38■□□□□ 0.85
MSI2-206ENST00000579180 ADAMTS2O95450 1211 aa20.37■□□□□ 0.85
MSI2-206ENST00000579180 SCN11AQ9UI33 1791 aa20.37■□□□□ 0.85
MSI2-206ENST00000579180 BCAR3O75815 825 aa20.36■□□□□ 0.85
MSI2-206ENST00000579180 SPG7Q9UQ90 795 aa20.36■□□□□ 0.85
MSI2-206ENST00000579180 SIPA1L3O60292 1781 aaPredicted RBP20.36■□□□□ 0.85
MSI2-206ENST00000579180 SHANK3Q9BYB0 1731 aa20.36■□□□□ 0.85
MSI2-206ENST00000579180 NUTM2BA6NNL0 878 aaPredicted RBP20.35■□□□□ 0.85
MSI2-206ENST00000579180 NUTM2EB1AL46 878 aaPredicted RBP20.35■□□□□ 0.85
MSI2-206ENST00000579180 C1orf141Q5JVX7 400 aa20.35■□□□□ 0.85
MSI2-206ENST00000579180 NUTM2AQ8IVF1 878 aaPredicted RBP20.35■□□□□ 0.85
MSI2-206ENST00000579180 PLIN1O60240 522 aa20.35■□□□□ 0.85
MSI2-206ENST00000579180 ERICH6BQ5W0A0 696 aa20.35■□□□□ 0.85
MSI2-206ENST00000579180 LGR6Q9HBX8 967 aa20.35■□□□□ 0.85
MSI2-206ENST00000579180 WNK3Q9BYP7 1800 aa20.34■□□□□ 0.85
MSI2-206ENST00000579180 MPRIPQ6WCQ1 1025 aa20.33■□□□□ 0.84
MSI2-206ENST00000579180 BABAM1Q9NWV8 329 aa20.33■□□□□ 0.84
MSI2-206ENST00000579180 KDM3BQ7LBC6 1761 aa20.33■□□□□ 0.84
MSI2-206ENST00000579180 SLIT2O94813 1529 aa20.32■□□□□ 0.84
MSI2-206ENST00000579180 RNMTO43148 476 aaKnown RBP20.32■□□□□ 0.84
MSI2-206ENST00000579180 VAMP4O75379 141 aa20.32■□□□□ 0.84
MSI2-206ENST00000579180 IL2RBP14784 551 aa20.32■□□□□ 0.84
MSI2-206ENST00000579180 PHKG2P15735 406 aa20.32■□□□□ 0.84
MSI2-206ENST00000579180 TAF7Q15545 349 aaPredicted RBP20.32■□□□□ 0.84
MSI2-206ENST00000579180 C8orf58Q8NAV2 365 aa20.32■□□□□ 0.84
MSI2-206ENST00000579180 MIS18AQ9NYP9 233 aa20.32■□□□□ 0.84
MSI2-206ENST00000579180 HSPA1LP34931 641 aa20.31■□□□□ 0.84
MSI2-206ENST00000579180 TSPYL6Q8N831 410 aa20.31■□□□□ 0.84
MSI2-206ENST00000579180 TSPYL4Q9UJ04 414 aa20.31■□□□□ 0.84
MSI2-206ENST00000579180 IFNL2Q8IZJ0 200 aa20.31■□□□□ 0.84
MSI2-206ENST00000579180 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.31■□□□□ 0.84
MSI2-206ENST00000579180 ZNF428Q96B54 188 aa20.31■□□□□ 0.84
MSI2-206ENST00000579180 SPATA31A6Q5VVP1 1343 aa20.3■□□□□ 0.84
MSI2-206ENST00000579180 CYP27B1O15528 508 aa20.3■□□□□ 0.84
MSI2-206ENST00000579180 KDM6AO15550 1401 aaPredicted RBP20.3■□□□□ 0.84
MSI2-206ENST00000579180 TWISTNBQ3B726 338 aaPredicted RBP20.29■□□□□ 0.84
MSI2-206ENST00000579180 SSH1Q8WYL5 1049 aa20.29■□□□□ 0.84
MSI2-206ENST00000579180 DISP2A7MBM2 1401 aa20.29■□□□□ 0.84
MSI2-206ENST00000579180 LRP6O75581 1613 aa20.28■□□□□ 0.84
MSI2-206ENST00000579180 ALDH1L2Q3SY69 923 aa20.28■□□□□ 0.84
MSI2-206ENST00000579180 ZCRB1Q8TBF4 217 aaKnown RBP20.28■□□□□ 0.84
MSI2-206ENST00000579180 BCL2L13Q9BXK5 485 aa20.27■□□□□ 0.84
MSI2-206ENST00000579180 USP35Q9P2H5 1018 aa20.27■□□□□ 0.84
MSI2-206ENST00000579180 ELL2O00472 640 aaPredicted RBP20.27■□□□□ 0.83
MSI2-206ENST00000579180 TEFQ10587 303 aa20.27■□□□□ 0.83
MSI2-206ENST00000579180 KRT24Q2M2I5 525 aa20.27■□□□□ 0.83
MSI2-206ENST00000579180 C20orf194Q5TEA3 1177 aa20.27■□□□□ 0.83
MSI2-206ENST00000579180 PCDH11XQ9BZA7 1347 aa20.26■□□□□ 0.83
MSI2-206ENST00000579180 PCDH11YQ9BZA8 1340 aa20.26■□□□□ 0.83
MSI2-206ENST00000579180 MRC1P22897 1456 aa20.25■□□□□ 0.83
MSI2-206ENST00000579180 DCAF5Q96JK2 942 aa20.25■□□□□ 0.83
MSI2-206ENST00000579180 SMC4Q9NTJ3 1288 aa20.25■□□□□ 0.83
MSI2-206ENST00000579180 HSP90AB1P08238 724 aaKnown RBP20.24■□□□□ 0.83
MSI2-206ENST00000579180 BRPF1P55201 1214 aaPredicted RBP20.24■□□□□ 0.83
MSI2-206ENST00000579180 SPATA31A1Q5TZJ5 1347 aa20.24■□□□□ 0.83
MSI2-206ENST00000579180 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.23■□□□□ 0.83
MSI2-206ENST00000579180 PDE3AQ14432 1141 aa20.23■□□□□ 0.83
MSI2-206ENST00000579180 NKX1-1Q15270 411 aaPredicted RBP20.23■□□□□ 0.83
MSI2-206ENST00000579180 BCL9LQ86UU0 1499 aa20.22■□□□□ 0.83
MSI2-206ENST00000579180 BTBD11A6QL63 1104 aa20.22■□□□□ 0.83
MSI2-206ENST00000579180 EXOC6Q8TAG9 804 aa20.22■□□□□ 0.83
MSI2-206ENST00000579180 FRAT1Q92837 279 aaPredicted RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms